Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 MIR1246-201ENST00000636535 73 ntBASIC-2.15□□□□□ -2.75
POLR2J3Q9H1A7 MIR4662A-201ENST00000637499 67 ntBASIC-2.15□□□□□ -2.75
POLR2J3Q9H1A7 MIR409-201ENST00000362237 79 ntBASIC-2.16□□□□□ -2.76
POLR2J3Q9H1A7 SNORD45.2-201ENST00000363552 72 ntBASIC-2.16□□□□□ -2.76
POLR2J3Q9H1A7 RNU6-68P-201ENST00000516576 104 ntBASIC-2.16□□□□□ -2.76
POLR2J3Q9H1A7 HAR1A.1-201ENST00000459583 118 ntBASIC-2.17□□□□□ -2.76
POLR2J3Q9H1A7 RNU6-983P-201ENST00000516004 103 ntBASIC-2.17□□□□□ -2.76
POLR2J3Q9H1A7 MIR4426-201ENST00000640330 63 ntBASIC-2.17□□□□□ -2.76
POLR2J3Q9H1A7 RNA5SP180-201ENST00000516181 101 ntBASIC-2.18□□□□□ -2.76
POLR2J3Q9H1A7 MIR664B-201ENST00000626756 61 ntBASIC-2.18□□□□□ -2.76
POLR2J3Q9H1A7 RNU6-980P-201ENST00000516925 103 ntBASIC-2.19□□□□□ -2.76
POLR2J3Q9H1A7 RNU6-471P-201ENST00000383944 106 ntBASIC-2.22□□□□□ -2.76
POLR2J3Q9H1A7 Y_RNA.685-201ENST00000516532 108 ntBASIC-2.22□□□□□ -2.76
POLR2J3Q9H1A7 RNU6-742P-201ENST00000365289 107 ntBASIC-2.23□□□□□ -2.77
POLR2J3Q9H1A7 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-2.23□□□□□ -2.77
POLR2J3Q9H1A7 RNU6-1079P-201ENST00000362861 110 ntBASIC-2.24□□□□□ -2.77
POLR2J3Q9H1A7 RNU6-1047P-201ENST00000364418 107 ntBASIC-2.24□□□□□ -2.77
POLR2J3Q9H1A7 RNU6-300P-201ENST00000459080 104 ntBASIC-2.24□□□□□ -2.77
POLR2J3Q9H1A7 RNU6-590P-201ENST00000365039 107 ntBASIC-2.25□□□□□ -2.77
POLR2J3Q9H1A7 Y_RNA.349-201ENST00000365406 102 ntBASIC-2.25□□□□□ -2.77
POLR2J3Q9H1A7 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.25□□□□□ -2.77
POLR2J3Q9H1A7 RNU6-446P-201ENST00000362827 106 ntBASIC-2.26□□□□□ -2.77
POLR2J3Q9H1A7 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.26□□□□□ -2.77
POLR2J3Q9H1A7 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.26□□□□□ -2.77
POLR2J3Q9H1A7 AC114801.3-201ENST00000510231 177 ntBASIC-2.27□□□□□ -2.77
POLR2J3Q9H1A7 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.27□□□□□ -2.77
POLR2J3Q9H1A7 RNU6-912P-201ENST00000363800 104 ntBASIC-2.28□□□□□ -2.77
POLR2J3Q9H1A7 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.28□□□□□ -2.77
POLR2J3Q9H1A7 MIR548AJ2-201ENST00000408539 92 ntBASIC-2.28□□□□□ -2.77
POLR2J3Q9H1A7 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.28□□□□□ -2.77
POLR2J3Q9H1A7 RNU6-1275P-201ENST00000391087 107 ntBASIC-2.29□□□□□ -2.78
POLR2J3Q9H1A7 AC097484.2-201ENST00000509147 251 ntBASIC-2.29□□□□□ -2.78
POLR2J3Q9H1A7 MIR548X-201ENST00000580069 75 ntBASIC-2.29□□□□□ -2.78
POLR2J3Q9H1A7 MIR379-201ENST00000362218 67 ntBASIC-2.3□□□□□ -2.78
POLR2J3Q9H1A7 RNU6-1324P-201ENST00000384222 107 ntBASIC-2.3□□□□□ -2.78
POLR2J3Q9H1A7 RNU6-176P-201ENST00000517196 105 ntBASIC-2.31□□□□□ -2.78
POLR2J3Q9H1A7 RNA5SP266-201ENST00000410273 108 ntBASIC-2.32□□□□□ -2.78
POLR2J3Q9H1A7 RNU6-1312P-201ENST00000362425 108 ntBASIC-2.33□□□□□ -2.78
POLR2J3Q9H1A7 Y_RNA.129-201ENST00000363392 110 ntBASIC-2.33□□□□□ -2.78
POLR2J3Q9H1A7 Y_RNA.181-201ENST00000363872 101 ntBASIC-2.34□□□□□ -2.78
POLR2J3Q9H1A7 SNORD113-3-201ENST00000364830 72 ntBASIC-2.34□□□□□ -2.78
POLR2J3Q9H1A7 Y_RNA.468-201ENST00000384298 102 ntBASIC-2.34□□□□□ -2.78
POLR2J3Q9H1A7 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-2.34□□□□□ -2.78
POLR2J3Q9H1A7 Y_RNA.320-201ENST00000365144 102 ntBASIC-2.35□□□□□ -2.79
POLR2J3Q9H1A7 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.35□□□□□ -2.79
POLR2J3Q9H1A7 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.35□□□□□ -2.79
POLR2J3Q9H1A7 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.35□□□□□ -2.79
POLR2J3Q9H1A7 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.35□□□□□ -2.79
POLR2J3Q9H1A7 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.35□□□□□ -2.79
POLR2J3Q9H1A7 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.35□□□□□ -2.79
POLR2J3Q9H1A7 Y_RNA.722-201ENST00000517279 114 ntBASIC-2.36□□□□□ -2.79
POLR2J3Q9H1A7 SNORD113-4-201ENST00000364802 75 ntBASIC-2.37□□□□□ -2.79
POLR2J3Q9H1A7 Y_RNA.543-201ENST00000384649 107 ntBASIC-2.38□□□□□ -2.79
POLR2J3Q9H1A7 MIR1285-2-201ENST00000408311 88 ntBASIC-2.38□□□□□ -2.79
POLR2J3Q9H1A7 RNU6-118P-201ENST00000516552 102 ntBASIC-2.38□□□□□ -2.79
POLR2J3Q9H1A7 MIR4748-201ENST00000578076 82 ntBASIC-2.38□□□□□ -2.79
POLR2J3Q9H1A7 FTX_4.1-201ENST00000616291 147 ntBASIC-2.38□□□□□ -2.79
POLR2J3Q9H1A7 RNA5SP405-201ENST00000363059 114 ntBASIC-2.39□□□□□ -2.79
POLR2J3Q9H1A7 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.41□□□□□ -2.8
POLR2J3Q9H1A7 RNU6-194P-201ENST00000363862 105 ntBASIC-2.43□□□□□ -2.8
POLR2J3Q9H1A7 Y_RNA.457-201ENST00000384237 111 ntBASIC-2.44□□□□□ -2.8
POLR2J3Q9H1A7 MIRLET7A2-201ENST00000362105 72 ntBASIC-2.45□□□□□ -2.8
POLR2J3Q9H1A7 RNU6-829P-201ENST00000363700 112 ntBASIC-2.46□□□□□ -2.8
POLR2J3Q9H1A7 MIR633-201ENST00000384821 98 ntBASIC-2.46□□□□□ -2.8
POLR2J3Q9H1A7 Y_RNA.434-201ENST00000384090 100 ntBASIC-2.47□□□□□ -2.8
POLR2J3Q9H1A7 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.47□□□□□ -2.8
POLR2J3Q9H1A7 SNX3P1X-201ENST00000414887 175 ntBASIC-2.47□□□□□ -2.8
POLR2J3Q9H1A7 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-2.48□□□□□ -2.81
POLR2J3Q9H1A7 MIR1254-1-201ENST00000408257 97 ntBASIC-2.49□□□□□ -2.81
POLR2J3Q9H1A7 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.5□□□□□ -2.81
POLR2J3Q9H1A7 RNU4-33P-201ENST00000364316 85 ntBASIC-2.52□□□□□ -2.81
POLR2J3Q9H1A7 MIR198-201ENST00000637333 62 ntBASIC-2.52□□□□□ -2.81
POLR2J3Q9H1A7 MIR4441-201ENST00000582623 100 ntBASIC-2.53□□□□□ -2.81
POLR2J3Q9H1A7 RNU6-141P-201ENST00000410499 105 ntBASIC-2.54□□□□□ -2.82
POLR2J3Q9H1A7 RNU6-1169P-201ENST00000363537 103 ntBASIC-2.55□□□□□ -2.82
POLR2J3Q9H1A7 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.55□□□□□ -2.82
POLR2J3Q9H1A7 RNA5SP331-201ENST00000364986 107 ntBASIC-2.56□□□□□ -2.82
POLR2J3Q9H1A7 MIR548H4-201ENST00000408689 111 ntBASIC-2.56□□□□□ -2.82
POLR2J3Q9H1A7 AC139453.2-201ENST00000487255 133 ntBASIC-2.56□□□□□ -2.82
POLR2J3Q9H1A7 Y_RNA.382-201ENST00000365672 114 ntBASIC-2.57□□□□□ -2.82
POLR2J3Q9H1A7 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-2.57□□□□□ -2.82
POLR2J3Q9H1A7 Y_RNA.616-201ENST00000410835 95 ntBASIC-2.58□□□□□ -2.82
POLR2J3Q9H1A7 RNU6-345P-201ENST00000517001 107 ntBASIC-2.58□□□□□ -2.82
POLR2J3Q9H1A7 MIR548AL-201ENST00000578416 97 ntBASIC-2.58□□□□□ -2.82
POLR2J3Q9H1A7 MIR3139-201ENST00000579145 76 ntBASIC-2.58□□□□□ -2.82
POLR2J3Q9H1A7 MIR365A-201ENST00000362260 87 ntBASIC-2.59□□□□□ -2.82
POLR2J3Q9H1A7 MIR4317-201ENST00000637586 65 ntBASIC-2.59□□□□□ -2.82
POLR2J3Q9H1A7 AC079150.2-201ENST00000443733 78 ntBASIC-2.6□□□□□ -2.83
POLR2J3Q9H1A7 RNU6-638P-201ENST00000516582 104 ntBASIC-2.6□□□□□ -2.83
POLR2J3Q9H1A7 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.61□□□□□ -2.83
POLR2J3Q9H1A7 RNY4P9-201ENST00000363194 97 ntBASIC-2.62□□□□□ -2.83
POLR2J3Q9H1A7 MIR601-201ENST00000385256 79 ntBASIC-2.62□□□□□ -2.83
POLR2J3Q9H1A7 AC125388.1-201ENST00000459631 156 ntBASIC-2.63□□□□□ -2.83
POLR2J3Q9H1A7 SNORA72.7-201ENST00000516349 94 ntBASIC-2.63□□□□□ -2.83
POLR2J3Q9H1A7 RNU6-822P-201ENST00000362707 106 ntBASIC-2.65□□□□□ -2.83
POLR2J3Q9H1A7 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.65□□□□□ -2.83
POLR2J3Q9H1A7 Y_RNA.519-201ENST00000384553 102 ntBASIC-2.67□□□□□ -2.84
POLR2J3Q9H1A7 Y_RNA.63-201ENST00000362841 102 ntBASIC-2.68□□□□□ -2.84
POLR2J3Q9H1A7 AL627230.5-201ENST00000619807 58 ntBASIC-2.69□□□□□ -2.84
POLR2J3Q9H1A7 MT-TM-201ENST00000387377 68 ntBASIC-2.72□□□□□ -2.84
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms