Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 RNU6-226P-201ENST00000363778 107 ntBASIC-0.67□□□□□ -2.52
CDX2Q99626 RNU6-361P-201ENST00000364454 107 ntBASIC-0.67□□□□□ -2.52
CDX2Q99626 Y_RNA.321-201ENST00000365149 102 ntBASIC-0.67□□□□□ -2.52
CDX2Q99626 Y_RNA.449-201ENST00000384187 102 ntBASIC-0.67□□□□□ -2.52
CDX2Q99626 SNORA17.4-201ENST00000391287 132 ntBASIC-0.67□□□□□ -2.52
CDX2Q99626 Y_RNA.103-201ENST00000363171 102 ntBASIC-0.68□□□□□ -2.52
CDX2Q99626 RNU6-1047P-201ENST00000364418 107 ntBASIC-0.68□□□□□ -2.52
CDX2Q99626 RNU6-695P-201ENST00000391157 104 ntBASIC-0.68□□□□□ -2.52
CDX2Q99626 MIR548N-201ENST00000408742 75 ntBASIC-0.68□□□□□ -2.52
CDX2Q99626 MIR23C-201ENST00000579846 100 ntBASIC-0.68□□□□□ -2.52
CDX2Q99626 RNU4-33P-201ENST00000364316 85 ntBASIC-0.69□□□□□ -2.52
CDX2Q99626 RNA5SP86-201ENST00000390869 98 ntBASIC-0.69□□□□□ -2.52
CDX2Q99626 MIR3115-201ENST00000577915 68 ntBASIC-0.69□□□□□ -2.52
CDX2Q99626 MIR3123-201ENST00000583417 75 ntBASIC-0.69□□□□□ -2.52
CDX2Q99626 Y_RNA.781-201ENST00000620301 103 ntBASIC-0.69□□□□□ -2.52
CDX2Q99626 RNU6-1008P-201ENST00000384160 104 ntBASIC-0.7□□□□□ -2.52
CDX2Q99626 RNU6-788P-201ENST00000390967 104 ntBASIC-0.7□□□□□ -2.52
CDX2Q99626 RNU6-400P-201ENST00000391173 106 ntBASIC-0.7□□□□□ -2.52
CDX2Q99626 MIR5591-201ENST00000578248 65 ntBASIC-0.7□□□□□ -2.52
CDX2Q99626 MIR548W-201ENST00000581970 74 ntBASIC-0.7□□□□□ -2.52
CDX2Q99626 MIR6738-201ENST00000619620 64 ntBASIC-0.7□□□□□ -2.52
CDX2Q99626 snoU13.10-201ENST00000459301 103 ntBASIC-0.71□□□□□ -2.52
CDX2Q99626 Y_RNA.175-201ENST00000363794 111 ntBASIC-0.72□□□□□ -2.52
CDX2Q99626 Y_RNA.320-201ENST00000365144 102 ntBASIC-0.72□□□□□ -2.52
CDX2Q99626 SNORD60-201ENST00000383903 83 ntBASIC-0.72□□□□□ -2.52
CDX2Q99626 RNU6-936P-201ENST00000384005 107 ntBASIC-0.72□□□□□ -2.52
CDX2Q99626 MIR548H4-201ENST00000408689 111 ntBASIC-0.72□□□□□ -2.52
CDX2Q99626 Y_RNA.722-201ENST00000517279 114 ntBASIC-0.72□□□□□ -2.52
CDX2Q99626 RNU6-912P-201ENST00000363800 104 ntBASIC-0.73□□□□□ -2.53
CDX2Q99626 HLA-S-202ENST00000425174 53 ntBASIC-0.73□□□□□ -2.53
CDX2Q99626 RNU6-300P-201ENST00000459080 104 ntBASIC-0.73□□□□□ -2.53
CDX2Q99626 RNU6-706P-201ENST00000517229 104 ntBASIC-0.73□□□□□ -2.53
CDX2Q99626 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-0.73□□□□□ -2.53
CDX2Q99626 SNORD19B.1-201ENST00000630615 80 ntBASIC-0.73□□□□□ -2.53
CDX2Q99626 MIR548AJ2-201ENST00000408539 92 ntBASIC-0.74□□□□□ -2.53
CDX2Q99626 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-0.74□□□□□ -2.53
CDX2Q99626 SNORD18C-201ENST00000362704 69 ntBASIC-0.75□□□□□ -2.53
CDX2Q99626 RNU6-986P-201ENST00000363133 102 ntBASIC-0.75□□□□□ -2.53
CDX2Q99626 RNU6-10P-201ENST00000384036 107 ntBASIC-0.75□□□□□ -2.53
CDX2Q99626 MIR548H1-201ENST00000408610 102 ntBASIC-0.75□□□□□ -2.53
CDX2Q99626 MIRLET7A2-201ENST00000362105 72 ntBASIC-0.76□□□□□ -2.53
CDX2Q99626 SNORD45.2-201ENST00000363552 72 ntBASIC-0.76□□□□□ -2.53
CDX2Q99626 RNU6-753P-201ENST00000363926 107 ntBASIC-0.76□□□□□ -2.53
CDX2Q99626 RNU6-1034P-201ENST00000365335 101 ntBASIC-0.76□□□□□ -2.53
CDX2Q99626 Y_RNA.379-201ENST00000365653 102 ntBASIC-0.76□□□□□ -2.53
CDX2Q99626 RNU6-1324P-201ENST00000384222 107 ntBASIC-0.76□□□□□ -2.53
CDX2Q99626 MIR548AM-201ENST00000584298 74 ntBASIC-0.76□□□□□ -2.53
CDX2Q99626 AC138207.3-201ENST00000585289 166 ntBASIC-0.77□□□□□ -2.53
CDX2Q99626 RNU4-88P-201ENST00000411220 86 ntBASIC-0.78□□□□□ -2.53
CDX2Q99626 MIR4756-201ENST00000577874 78 ntBASIC-0.78□□□□□ -2.53
CDX2Q99626 MIR548AL-201ENST00000578416 97 ntBASIC-0.78□□□□□ -2.53
CDX2Q99626 MIR4770-201ENST00000579149 58 ntBASIC-0.78□□□□□ -2.53
CDX2Q99626 RNU6-614P-201ENST00000384369 107 ntBASIC-0.79□□□□□ -2.54
CDX2Q99626 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-0.79□□□□□ -2.54
CDX2Q99626 U6.59-201ENST00000615686 107 ntBASIC-0.79□□□□□ -2.54
CDX2Q99626 RNU6-1169P-201ENST00000363537 103 ntBASIC-0.8□□□□□ -2.54
CDX2Q99626 SNORD113-3-201ENST00000364830 72 ntBASIC-0.8□□□□□ -2.54
CDX2Q99626 RNU6-841P-201ENST00000383872 107 ntBASIC-0.8□□□□□ -2.54
CDX2Q99626 MTND4LP19-201ENST00000403051 166 ntBASIC-0.8□□□□□ -2.54
CDX2Q99626 AC108019.1-201ENST00000512540 175 ntBASIC-0.8□□□□□ -2.54
CDX2Q99626 Y_RNA.434-201ENST00000384090 100 ntBASIC-0.81□□□□□ -2.54
CDX2Q99626 MIR1254-1-201ENST00000408257 97 ntBASIC-0.81□□□□□ -2.54
CDX2Q99626 MIR548F3-201ENST00000408509 87 ntBASIC-0.81□□□□□ -2.54
CDX2Q99626 MIR3165-201ENST00000579874 75 ntBASIC-0.81□□□□□ -2.54
CDX2Q99626 RNU6-838P-201ENST00000363399 108 ntBASIC-0.82□□□□□ -2.54
CDX2Q99626 Y_RNA.349-201ENST00000365406 102 ntBASIC-0.82□□□□□ -2.54
CDX2Q99626 RNA5SP461-201ENST00000516451 104 ntBASIC-0.82□□□□□ -2.54
CDX2Q99626 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-0.82□□□□□ -2.54
CDX2Q99626 Y_RNA.382-201ENST00000365672 114 ntBASIC-0.83□□□□□ -2.54
CDX2Q99626 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.83□□□□□ -2.54
CDX2Q99626 SNORD18.1-201ENST00000363807 70 ntBASIC-0.84□□□□□ -2.54
CDX2Q99626 MIR365A-201ENST00000362260 87 ntBASIC-0.85□□□□□ -2.55
CDX2Q99626 RNU6-930P-201ENST00000390938 100 ntBASIC-0.85□□□□□ -2.55
CDX2Q99626 MIR379-201ENST00000362218 67 ntBASIC-0.86□□□□□ -2.55
CDX2Q99626 Y_RNA.129-201ENST00000363392 110 ntBASIC-0.86□□□□□ -2.55
CDX2Q99626 MIR545-201ENST00000385085 106 ntBASIC-0.86□□□□□ -2.55
CDX2Q99626 RNU6-176P-201ENST00000517196 105 ntBASIC-0.86□□□□□ -2.55
CDX2Q99626 Y_RNA.63-201ENST00000362841 102 ntBASIC-0.87□□□□□ -2.55
CDX2Q99626 Y_RNA.211-201ENST00000364164 101 ntBASIC-0.87□□□□□ -2.55
CDX2Q99626 Y_RNA.345-201ENST00000365384 92 ntBASIC-0.87□□□□□ -2.55
CDX2Q99626 Y_RNA.502-201ENST00000384478 113 ntBASIC-0.87□□□□□ -2.55
CDX2Q99626 RNU6-808P-201ENST00000391233 108 ntBASIC-0.87□□□□□ -2.55
CDX2Q99626 RNU6-1326P-201ENST00000391262 107 ntBASIC-0.87□□□□□ -2.55
CDX2Q99626 MIR4317-201ENST00000637586 65 ntBASIC-0.87□□□□□ -2.55
CDX2Q99626 RNU6-1204P-201ENST00000363948 107 ntBASIC-0.88□□□□□ -2.55
CDX2Q99626 Y_RNA.284-201ENST00000364806 102 ntBASIC-0.88□□□□□ -2.55
CDX2Q99626 AC097484.2-201ENST00000509147 251 ntBASIC-0.88□□□□□ -2.55
CDX2Q99626 RNU6-59P-201ENST00000384787 107 ntBASIC-0.89□□□□□ -2.55
CDX2Q99626 FTX_4.1-201ENST00000616291 147 ntBASIC-0.89□□□□□ -2.55
CDX2Q99626 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.89□□□□□ -2.55
CDX2Q99626 Y_RNA.134-201ENST00000363435 105 ntBASIC-0.9□□□□□ -2.55
CDX2Q99626 SNORD115.2-201ENST00000391126 59 ntBASIC-0.9□□□□□ -2.55
CDX2Q99626 Y_RNA.591-201ENST00000410228 104 ntBASIC-0.9□□□□□ -2.55
CDX2Q99626 Y_RNA.647-201ENST00000459194 112 ntBASIC-0.9□□□□□ -2.55
CDX2Q99626 Y_RNA.640-201ENST00000459296 112 ntBASIC-0.9□□□□□ -2.55
CDX2Q99626 Y_RNA.803-201ENST00000614432 112 ntBASIC-0.9□□□□□ -2.55
CDX2Q99626 DLEU2_4.2-201ENST00000616613 58 ntBASIC-0.9□□□□□ -2.55
CDX2Q99626 Y_RNA.815-201ENST00000616655 112 ntBASIC-0.9□□□□□ -2.55
CDX2Q99626 Y_RNA.795-201ENST00000619475 112 ntBASIC-0.9□□□□□ -2.55
CDX2Q99626 Y_RNA.827-201ENST00000638104 112 ntBASIC-0.9□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms