Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.09□□□□□ -2.74
ZIC4Q8N9L1 MIR5693-201ENST00000577722 73 ntBASIC-2.09□□□□□ -2.74
ZIC4Q8N9L1 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.09□□□□□ -2.74
ZIC4Q8N9L1 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.09□□□□□ -2.74
ZIC4Q8N9L1 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.09□□□□□ -2.74
ZIC4Q8N9L1 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.09□□□□□ -2.74
ZIC4Q8N9L1 MIRLET7A2-201ENST00000362105 72 ntBASIC-2.1□□□□□ -2.75
ZIC4Q8N9L1 SNORA40B-201ENST00000385573 128 ntBASIC-2.1□□□□□ -2.75
ZIC4Q8N9L1 SNORD113-1-201ENST00000365321 69 ntBASIC-2.11□□□□□ -2.75
ZIC4Q8N9L1 SNORD116.2-201ENST00000391251 93 ntBASIC-2.11□□□□□ -2.75
ZIC4Q8N9L1 Y_RNA.629-201ENST00000411368 105 ntBASIC-2.11□□□□□ -2.75
ZIC4Q8N9L1 RNU6-68P-201ENST00000516576 104 ntBASIC-2.11□□□□□ -2.75
ZIC4Q8N9L1 SNORA40.16-201ENST00000517238 121 ntBASIC-2.12□□□□□ -2.75
ZIC4Q8N9L1 Y_RNA.59-201ENST00000362828 102 ntBASIC-2.13□□□□□ -2.75
ZIC4Q8N9L1 Y_RNA.134-201ENST00000363435 105 ntBASIC-2.14□□□□□ -2.75
ZIC4Q8N9L1 RNU6-215P-201ENST00000365169 102 ntBASIC-2.14□□□□□ -2.75
ZIC4Q8N9L1 RNU6-530P-201ENST00000391180 107 ntBASIC-2.14□□□□□ -2.75
ZIC4Q8N9L1 MIR548M-201ENST00000408260 86 ntBASIC-2.14□□□□□ -2.75
ZIC4Q8N9L1 RNU6-122P-201ENST00000516818 107 ntBASIC-2.14□□□□□ -2.75
ZIC4Q8N9L1 MIR3910-1-201ENST00000580936 111 ntBASIC-2.14□□□□□ -2.75
ZIC4Q8N9L1 Y_RNA.79-201ENST00000362992 113 ntBASIC-2.15□□□□□ -2.75
ZIC4Q8N9L1 Y_RNA.291-201ENST00000364886 113 ntBASIC-2.15□□□□□ -2.75
ZIC4Q8N9L1 MT-TR-201ENST00000387439 65 ntBASIC-2.15□□□□□ -2.75
ZIC4Q8N9L1 MIR4666B-201ENST00000578142 81 ntBASIC-2.15□□□□□ -2.75
ZIC4Q8N9L1 SNORD113-3-201ENST00000364830 72 ntBASIC-2.16□□□□□ -2.76
ZIC4Q8N9L1 RNU6-411P-201ENST00000384451 107 ntBASIC-2.16□□□□□ -2.76
ZIC4Q8N9L1 Y_RNA.511-201ENST00000384514 103 ntBASIC-2.16□□□□□ -2.76
ZIC4Q8N9L1 SNORA25.5-201ENST00000363782 126 ntBASIC-2.17□□□□□ -2.76
ZIC4Q8N9L1 RNU6-787P-201ENST00000384032 107 ntBASIC-2.17□□□□□ -2.76
ZIC4Q8N9L1 RNU6-1324P-201ENST00000384222 107 ntBASIC-2.17□□□□□ -2.76
ZIC4Q8N9L1 RNU6-634P-201ENST00000459134 106 ntBASIC-2.17□□□□□ -2.76
ZIC4Q8N9L1 RNU6-1276P-201ENST00000365372 104 ntBASIC-2.18□□□□□ -2.76
ZIC4Q8N9L1 RNA5SP89-201ENST00000410300 108 ntBASIC-2.18□□□□□ -2.76
ZIC4Q8N9L1 AL451105.1-201ENST00000450005 189 ntBASIC-2.18□□□□□ -2.76
ZIC4Q8N9L1 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-2.18□□□□□ -2.76
ZIC4Q8N9L1 SNORD20-201ENST00000384550 80 ntBASIC-2.19□□□□□ -2.76
ZIC4Q8N9L1 RNU6-919P-201ENST00000516731 104 ntBASIC-2.19□□□□□ -2.76
ZIC4Q8N9L1 MIR3668-201ENST00000582138 75 ntBASIC-2.19□□□□□ -2.76
ZIC4Q8N9L1 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-2.19□□□□□ -2.76
ZIC4Q8N9L1 MIR4426-201ENST00000640330 63 ntBASIC-2.19□□□□□ -2.76
ZIC4Q8N9L1 MIR494-201ENST00000349529 81 ntBASIC-2.2□□□□□ -2.76
ZIC4Q8N9L1 MIR379-201ENST00000362218 67 ntBASIC-2.2□□□□□ -2.76
ZIC4Q8N9L1 RNU6-1296P-201ENST00000383879 107 ntBASIC-2.2□□□□□ -2.76
ZIC4Q8N9L1 MIR548AJ2-201ENST00000408539 92 ntBASIC-2.2□□□□□ -2.76
ZIC4Q8N9L1 RNU6-912P-201ENST00000363800 104 ntBASIC-2.21□□□□□ -2.76
ZIC4Q8N9L1 RNU6-1047P-201ENST00000364418 107 ntBASIC-2.21□□□□□ -2.76
ZIC4Q8N9L1 RNU6-1277P-201ENST00000364561 107 ntBASIC-2.21□□□□□ -2.76
ZIC4Q8N9L1 RNU6-663P-201ENST00000391105 106 ntBASIC-2.21□□□□□ -2.76
ZIC4Q8N9L1 RNY4P25-201ENST00000459254 96 ntBASIC-2.21□□□□□ -2.76
ZIC4Q8N9L1 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-2.21□□□□□ -2.76
ZIC4Q8N9L1 Y_RNA.830-201ENST00000628531 96 ntBASIC-2.21□□□□□ -2.76
ZIC4Q8N9L1 RNU6-242P-201ENST00000384359 107 ntBASIC-2.22□□□□□ -2.76
ZIC4Q8N9L1 MIR509-1-201ENST00000385265 94 ntBASIC-2.22□□□□□ -2.76
ZIC4Q8N9L1 MIR509-2-201ENST00000390724 91 ntBASIC-2.22□□□□□ -2.76
ZIC4Q8N9L1 RNA5SP106-201ENST00000517274 100 ntBASIC-2.22□□□□□ -2.76
ZIC4Q8N9L1 MIR3671-201ENST00000580455 88 ntBASIC-2.22□□□□□ -2.76
ZIC4Q8N9L1 RNU6-590P-201ENST00000365039 107 ntBASIC-2.23□□□□□ -2.77
ZIC4Q8N9L1 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-2.23□□□□□ -2.77
ZIC4Q8N9L1 RNU7-119P-201ENST00000459279 63 ntBASIC-2.23□□□□□ -2.77
ZIC4Q8N9L1 SNORD45.2-201ENST00000363552 72 ntBASIC-2.24□□□□□ -2.77
ZIC4Q8N9L1 SNORA25.4-201ENST00000363666 124 ntBASIC-2.24□□□□□ -2.77
ZIC4Q8N9L1 RNU6-987P-201ENST00000384759 104 ntBASIC-2.24□□□□□ -2.77
ZIC4Q8N9L1 Y_RNA.129-201ENST00000363392 110 ntBASIC-2.25□□□□□ -2.77
ZIC4Q8N9L1 MIR450A2-201ENST00000385022 100 ntBASIC-2.25□□□□□ -2.77
ZIC4Q8N9L1 RNU6-300P-201ENST00000459080 104 ntBASIC-2.25□□□□□ -2.77
ZIC4Q8N9L1 U7.4-201ENST00000614961 63 ntBASIC-2.25□□□□□ -2.77
ZIC4Q8N9L1 RNU6-44P-201ENST00000384045 107 ntBASIC-2.26□□□□□ -2.77
ZIC4Q8N9L1 RNY4P10-201ENST00000365571 96 ntBASIC-2.27□□□□□ -2.77
ZIC4Q8N9L1 RNU6-1124P-201ENST00000384169 107 ntBASIC-2.27□□□□□ -2.77
ZIC4Q8N9L1 RNY4P30-201ENST00000410216 95 ntBASIC-2.28□□□□□ -2.77
ZIC4Q8N9L1 RNU6-176P-201ENST00000517196 105 ntBASIC-2.28□□□□□ -2.77
ZIC4Q8N9L1 MIRLET7A3-201ENST00000362116 74 ntBASIC-2.29□□□□□ -2.78
ZIC4Q8N9L1 Y_RNA.320-201ENST00000365144 102 ntBASIC-2.29□□□□□ -2.78
ZIC4Q8N9L1 RNU6-419P-201ENST00000517030 63 ntBASIC-2.29□□□□□ -2.78
ZIC4Q8N9L1 RNU6-153P-201ENST00000364422 104 ntBASIC-2.3□□□□□ -2.78
ZIC4Q8N9L1 RNU6-742P-201ENST00000365289 107 ntBASIC-2.3□□□□□ -2.78
ZIC4Q8N9L1 MIR4511-201ENST00000582784 87 ntBASIC-2.3□□□□□ -2.78
ZIC4Q8N9L1 AL731768.1-201ENST00000603124 139 ntBASIC-2.3□□□□□ -2.78
ZIC4Q8N9L1 RNU6-1044P-201ENST00000384755 107 ntBASIC-2.31□□□□□ -2.78
ZIC4Q8N9L1 RNU6-940P-201ENST00000363433 104 ntBASIC-2.32□□□□□ -2.78
ZIC4Q8N9L1 AL606753.1-201ENST00000427435 87 ntBASIC-2.32□□□□□ -2.78
ZIC4Q8N9L1 Y_RNA.657-201ENST00000515983 102 ntBASIC-2.32□□□□□ -2.78
ZIC4Q8N9L1 Y_RNA.266-201ENST00000364678 96 ntBASIC-2.33□□□□□ -2.78
ZIC4Q8N9L1 RNU6-294P-201ENST00000364999 102 ntBASIC-2.33□□□□□ -2.78
ZIC4Q8N9L1 Y_RNA.434-201ENST00000384090 100 ntBASIC-2.33□□□□□ -2.78
ZIC4Q8N9L1 Y_RNA.545-201ENST00000384652 105 ntBASIC-2.33□□□□□ -2.78
ZIC4Q8N9L1 SNORD30.1-201ENST00000391309 70 ntBASIC-2.33□□□□□ -2.78
ZIC4Q8N9L1 MIR3938-201ENST00000582157 103 ntBASIC-2.33□□□□□ -2.78
ZIC4Q8N9L1 AC103706.3-201ENST00000636297 85 ntBASIC-2.34□□□□□ -2.78
ZIC4Q8N9L1 SNORD114-13-201ENST00000364377 74 ntBASIC-2.35□□□□□ -2.79
ZIC4Q8N9L1 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-2.35□□□□□ -2.79
ZIC4Q8N9L1 U6.111-201ENST00000636093 83 ntBASIC-2.35□□□□□ -2.79
ZIC4Q8N9L1 MIR1254-1-201ENST00000408257 97 ntBASIC-2.36□□□□□ -2.79
ZIC4Q8N9L1 RNU6-820P-201ENST00000384273 107 ntBASIC-2.37□□□□□ -2.79
ZIC4Q8N9L1 Y_RNA.694-201ENST00000516677 117 ntBASIC-2.37□□□□□ -2.79
ZIC4Q8N9L1 AC062037.1-201ENST00000605302 128 ntBASIC-2.37□□□□□ -2.79
ZIC4Q8N9L1 RNU6-871P-201ENST00000516122 100 ntBASIC-2.4□□□□□ -2.79
ZIC4Q8N9L1 RNU6-406P-201ENST00000516470 107 ntBASIC-2.4□□□□□ -2.79
ZIC4Q8N9L1 RNU6-539P-201ENST00000516665 103 ntBASIC-2.4□□□□□ -2.79
ZIC4Q8N9L1 Y_RNA.612-201ENST00000410717 95 ntBASIC-2.41□□□□□ -2.8
Retrieved 100 of 98,524 protein–RNA pairs in 9.3 ms