Protein–RNA interactions for Protein: Q8N6Y0

USHBP1, Usher syndrome type-1C protein-binding protein 1, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1Q8N6Y0 RNU6-226P-201ENST00000363778 107 ntBASIC-0.66□□□□□ -2.52
USHBP1Q8N6Y0 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.66□□□□□ -2.52
USHBP1Q8N6Y0 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.67□□□□□ -2.52
USHBP1Q8N6Y0 MIR545-201ENST00000385085 106 ntBASIC-0.67□□□□□ -2.52
USHBP1Q8N6Y0 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.67□□□□□ -2.52
USHBP1Q8N6Y0 snoU83B.1-201ENST00000517136 88 ntBASIC-0.67□□□□□ -2.52
USHBP1Q8N6Y0 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.67□□□□□ -2.52
USHBP1Q8N6Y0 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.67□□□□□ -2.52
USHBP1Q8N6Y0 RNU6-176P-201ENST00000517196 105 ntBASIC-0.68□□□□□ -2.52
USHBP1Q8N6Y0 MIR382-201ENST00000637119 76 ntBASIC-0.68□□□□□ -2.52
USHBP1Q8N6Y0 MIR6818-201ENST00000621576 65 ntBASIC-0.69□□□□□ -2.52
USHBP1Q8N6Y0 MIR198-201ENST00000637333 62 ntBASIC-0.69□□□□□ -2.52
USHBP1Q8N6Y0 RNU6-300P-201ENST00000459080 104 ntBASIC-0.7□□□□□ -2.52
USHBP1Q8N6Y0 MIR4306-201ENST00000583390 91 ntBASIC-0.7□□□□□ -2.52
USHBP1Q8N6Y0 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.71□□□□□ -2.52
USHBP1Q8N6Y0 AC120024.2-201ENST00000576526 175 ntBASIC-0.71□□□□□ -2.52
USHBP1Q8N6Y0 RNY4P27-201ENST00000363341 96 ntBASIC-0.73□□□□□ -2.53
USHBP1Q8N6Y0 MIR1285-2-201ENST00000408311 88 ntBASIC-0.73□□□□□ -2.53
USHBP1Q8N6Y0 uc_338.19-201ENST00000616808 99 ntBASIC-0.73□□□□□ -2.53
USHBP1Q8N6Y0 MIR4317-201ENST00000637586 65 ntBASIC-0.73□□□□□ -2.53
USHBP1Q8N6Y0 AC018880.2-201ENST00000414265 201 ntBASIC-0.74□□□□□ -2.53
USHBP1Q8N6Y0 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.74□□□□□ -2.53
USHBP1Q8N6Y0 AC013734.1-201ENST00000619329 111 ntBASIC-0.74□□□□□ -2.53
USHBP1Q8N6Y0 MIR1246-201ENST00000636535 73 ntBASIC-0.74□□□□□ -2.53
USHBP1Q8N6Y0 MIR365A-201ENST00000362260 87 ntBASIC-0.75□□□□□ -2.53
USHBP1Q8N6Y0 RNU6-164P-201ENST00000364604 103 ntBASIC-0.75□□□□□ -2.53
USHBP1Q8N6Y0 Y_RNA.684-201ENST00000516510 99 ntBASIC-0.75□□□□□ -2.53
USHBP1Q8N6Y0 MIR4441-201ENST00000582623 100 ntBASIC-0.75□□□□□ -2.53
USHBP1Q8N6Y0 MIR1207-201ENST00000408249 87 ntBASIC-0.76□□□□□ -2.53
USHBP1Q8N6Y0 MIR548N-201ENST00000408742 75 ntBASIC-0.76□□□□□ -2.53
USHBP1Q8N6Y0 MIR3165-201ENST00000579874 75 ntBASIC-0.76□□□□□ -2.53
USHBP1Q8N6Y0 Y_RNA.781-201ENST00000620301 103 ntBASIC-0.76□□□□□ -2.53
USHBP1Q8N6Y0 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.76□□□□□ -2.53
USHBP1Q8N6Y0 RNU6-986P-201ENST00000363133 102 ntBASIC-0.77□□□□□ -2.53
USHBP1Q8N6Y0 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.77□□□□□ -2.53
USHBP1Q8N6Y0 MIR548H4-201ENST00000408689 111 ntBASIC-0.78□□□□□ -2.53
USHBP1Q8N6Y0 RNU6-1047P-201ENST00000364418 107 ntBASIC-0.79□□□□□ -2.54
USHBP1Q8N6Y0 RNU6-563P-201ENST00000364872 108 ntBASIC-0.8□□□□□ -2.54
USHBP1Q8N6Y0 SNORD114-3-201ENST00000364969 75 ntBASIC-0.8□□□□□ -2.54
USHBP1Q8N6Y0 RNU6-822P-201ENST00000362707 106 ntBASIC-0.81□□□□□ -2.54
USHBP1Q8N6Y0 MIR8485-201ENST00000401372 91 ntBASIC-0.81□□□□□ -2.54
USHBP1Q8N6Y0 U6.97-201ENST00000636904 101 ntBASIC-0.82□□□□□ -2.54
USHBP1Q8N6Y0 RNU6-706P-201ENST00000517229 104 ntBASIC-0.83□□□□□ -2.54
USHBP1Q8N6Y0 RNU6-79P-201ENST00000362511 107 ntBASIC-0.84□□□□□ -2.54
USHBP1Q8N6Y0 RNU6-576P-201ENST00000390854 102 ntBASIC-0.84□□□□□ -2.54
USHBP1Q8N6Y0 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.84□□□□□ -2.54
USHBP1Q8N6Y0 RNU6-1008P-201ENST00000384160 104 ntBASIC-0.85□□□□□ -2.55
USHBP1Q8N6Y0 MIR496-201ENST00000385226 102 ntBASIC-0.85□□□□□ -2.55
USHBP1Q8N6Y0 RNU7-134P-201ENST00000458997 64 ntBASIC-0.85□□□□□ -2.55
USHBP1Q8N6Y0 Y_RNA.223-201ENST00000364290 113 ntBASIC-0.87□□□□□ -2.55
USHBP1Q8N6Y0 HLA-S-202ENST00000425174 53 ntBASIC-0.87□□□□□ -2.55
USHBP1Q8N6Y0 SNORD18C-201ENST00000362704 69 ntBASIC-0.88□□□□□ -2.55
USHBP1Q8N6Y0 Y_RNA.232-201ENST00000364369 96 ntBASIC-0.88□□□□□ -2.55
USHBP1Q8N6Y0 MIR581-201ENST00000384895 96 ntBASIC-0.88□□□□□ -2.55
USHBP1Q8N6Y0 RNU6-1326P-201ENST00000391262 107 ntBASIC-0.88□□□□□ -2.55
USHBP1Q8N6Y0 Y_RNA.543-201ENST00000384649 107 ntBASIC-0.89□□□□□ -2.55
USHBP1Q8N6Y0 MIR5591-201ENST00000578248 65 ntBASIC-0.89□□□□□ -2.55
USHBP1Q8N6Y0 Y_RNA.129-201ENST00000363392 110 ntBASIC-0.9□□□□□ -2.55
USHBP1Q8N6Y0 Y_RNA.475-201ENST00000384345 101 ntBASIC-0.91□□□□□ -2.56
USHBP1Q8N6Y0 RNU6-983P-201ENST00000516004 103 ntBASIC-0.91□□□□□ -2.56
USHBP1Q8N6Y0 AC138207.3-201ENST00000585289 166 ntBASIC-0.91□□□□□ -2.56
USHBP1Q8N6Y0 RNU6-59P-201ENST00000384787 107 ntBASIC-0.92□□□□□ -2.56
USHBP1Q8N6Y0 Y_RNA.345-201ENST00000365384 92 ntBASIC-0.94□□□□□ -2.56
USHBP1Q8N6Y0 AC091912.2-201ENST00000624798 167 ntBASIC-0.94□□□□□ -2.56
USHBP1Q8N6Y0 RNU6-1247P-201ENST00000516622 98 ntBASIC-0.95□□□□□ -2.56
USHBP1Q8N6Y0 MIR379-201ENST00000362218 67 ntBASIC-0.96□□□□□ -2.56
USHBP1Q8N6Y0 MIR6874-201ENST00000635894 71 ntBASIC-0.96□□□□□ -2.56
USHBP1Q8N6Y0 RNA5SP93-201ENST00000362525 114 ntBASIC-0.97□□□□□ -2.56
USHBP1Q8N6Y0 Y_RNA.228-201ENST00000364346 98 ntBASIC-0.97□□□□□ -2.56
USHBP1Q8N6Y0 RNU6-118P-201ENST00000516552 102 ntBASIC-0.97□□□□□ -2.56
USHBP1Q8N6Y0 MIR4770-201ENST00000579149 58 ntBASIC-0.97□□□□□ -2.56
USHBP1Q8N6Y0 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-0.97□□□□□ -2.56
USHBP1Q8N6Y0 MIR6502-201ENST00000617296 76 ntBASIC-0.98□□□□□ -2.57
USHBP1Q8N6Y0 Y_RNA.225-201ENST00000364326 97 ntBASIC-0.99□□□□□ -2.57
USHBP1Q8N6Y0 RNA5SP86-201ENST00000390869 98 ntBASIC-0.99□□□□□ -2.57
USHBP1Q8N6Y0 RNU6-695P-201ENST00000391157 104 ntBASIC-1□□□□□ -2.57
USHBP1Q8N6Y0 MIR4520-1-201ENST00000582609 70 ntBASIC-1□□□□□ -2.57
USHBP1Q8N6Y0 RNU6-400P-201ENST00000391173 106 ntBASIC-1.01□□□□□ -2.57
USHBP1Q8N6Y0 SNORD18.1-201ENST00000363807 70 ntBASIC-1.02□□□□□ -2.57
USHBP1Q8N6Y0 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.02□□□□□ -2.57
USHBP1Q8N6Y0 RNU6-68P-201ENST00000516576 104 ntBASIC-1.02□□□□□ -2.57
USHBP1Q8N6Y0 MIR487B-201ENST00000385021 84 ntBASIC-1.05□□□□□ -2.58
USHBP1Q8N6Y0 MIR4756-201ENST00000577874 78 ntBASIC-1.07□□□□□ -2.58
USHBP1Q8N6Y0 RNU6-119P-201ENST00000364882 107 ntBASIC-1.08□□□□□ -2.58
USHBP1Q8N6Y0 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.08□□□□□ -2.58
USHBP1Q8N6Y0 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.08□□□□□ -2.58
USHBP1Q8N6Y0 Y_RNA.382-201ENST00000365672 114 ntBASIC-1.09□□□□□ -2.58
USHBP1Q8N6Y0 MIR3139-201ENST00000579145 76 ntBASIC-1.09□□□□□ -2.58
USHBP1Q8N6Y0 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.09□□□□□ -2.58
USHBP1Q8N6Y0 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.1□□□□□ -2.59
USHBP1Q8N6Y0 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.1□□□□□ -2.59
USHBP1Q8N6Y0 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.1□□□□□ -2.59
USHBP1Q8N6Y0 AC108019.1-201ENST00000512540 175 ntBASIC-1.1□□□□□ -2.59
USHBP1Q8N6Y0 RNY4P7-201ENST00000364600 96 ntBASIC-1.11□□□□□ -2.59
USHBP1Q8N6Y0 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.11□□□□□ -2.59
USHBP1Q8N6Y0 U6.103-201ENST00000637085 61 ntBASIC-1.11□□□□□ -2.59
USHBP1Q8N6Y0 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.13□□□□□ -2.59
USHBP1Q8N6Y0 RNU6-912P-201ENST00000363800 104 ntBASIC-1.14□□□□□ -2.59
USHBP1Q8N6Y0 SNORD54-201ENST00000459159 67 ntBASIC-1.14□□□□□ -2.59
USHBP1Q8N6Y0 MIR664B-201ENST00000626756 61 ntBASIC-1.14□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms