Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 SNORA25.4-201ENST00000363666 124 ntBASIC-1.54□□□□□ -2.66
CCDC71Q8IV32 MIR7978-201ENST00000636158 59 ntBASIC-1.54□□□□□ -2.66
CCDC71Q8IV32 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.55□□□□□ -2.66
CCDC71Q8IV32 SNORD78.1-201ENST00000390866 65 ntBASIC-1.55□□□□□ -2.66
CCDC71Q8IV32 SNORD30.1-201ENST00000391309 70 ntBASIC-1.55□□□□□ -2.66
CCDC71Q8IV32 MIR466-201ENST00000580653 84 ntBASIC-1.55□□□□□ -2.66
CCDC71Q8IV32 Y_RNA.658-201ENST00000515990 97 ntBASIC-1.56□□□□□ -2.66
CCDC71Q8IV32 MIR579-201ENST00000385221 98 ntBASIC-1.57□□□□□ -2.66
CCDC71Q8IV32 MIR125B1-201ENST00000385236 88 ntBASIC-1.57□□□□□ -2.66
CCDC71Q8IV32 RNU7-160P-201ENST00000516660 62 ntBASIC-1.57□□□□□ -2.66
CCDC71Q8IV32 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.57□□□□□ -2.66
CCDC71Q8IV32 SNORA27.2-201ENST00000363365 126 ntBASIC-1.58□□□□□ -2.66
CCDC71Q8IV32 SNORA25.5-201ENST00000363782 126 ntBASIC-1.59□□□□□ -2.66
CCDC71Q8IV32 RNU6-669P-201ENST00000365575 107 ntBASIC-1.59□□□□□ -2.66
CCDC71Q8IV32 RNU6-649P-201ENST00000384463 107 ntBASIC-1.59□□□□□ -2.66
CCDC71Q8IV32 RNU6-258P-201ENST00000390884 101 ntBASIC-1.59□□□□□ -2.66
CCDC71Q8IV32 MIR3123-201ENST00000583417 75 ntBASIC-1.59□□□□□ -2.66
CCDC71Q8IV32 MIR7110-201ENST00000612638 86 ntBASIC-1.59□□□□□ -2.66
CCDC71Q8IV32 RNU6-695P-201ENST00000391157 104 ntBASIC-1.6□□□□□ -2.67
CCDC71Q8IV32 RNU6-539P-201ENST00000516665 103 ntBASIC-1.6□□□□□ -2.67
CCDC71Q8IV32 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.61□□□□□ -2.67
CCDC71Q8IV32 SNORD63.2-201ENST00000516303 64 ntBASIC-1.61□□□□□ -2.67
CCDC71Q8IV32 RNU6-122P-201ENST00000516818 107 ntBASIC-1.61□□□□□ -2.67
CCDC71Q8IV32 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.62□□□□□ -2.67
CCDC71Q8IV32 AC005520.4-201ENST00000604337 90 ntBASIC-1.62□□□□□ -2.67
CCDC71Q8IV32 U6.111-201ENST00000636093 83 ntBASIC-1.62□□□□□ -2.67
CCDC71Q8IV32 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.63□□□□□ -2.67
CCDC71Q8IV32 RNU6-231P-201ENST00000517122 103 ntBASIC-1.63□□□□□ -2.67
CCDC71Q8IV32 AC120024.2-201ENST00000576526 175 ntBASIC-1.63□□□□□ -2.67
CCDC71Q8IV32 MIR4511-201ENST00000582784 87 ntBASIC-1.63□□□□□ -2.67
CCDC71Q8IV32 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.63□□□□□ -2.67
CCDC71Q8IV32 AC103706.3-201ENST00000636297 85 ntBASIC-1.63□□□□□ -2.67
CCDC71Q8IV32 RNA5SP225-201ENST00000410874 135 ntBASIC-1.64□□□□□ -2.67
CCDC71Q8IV32 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.64□□□□□ -2.67
CCDC71Q8IV32 MIR4662A-201ENST00000637499 67 ntBASIC-1.66□□□□□ -2.68
CCDC71Q8IV32 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.67□□□□□ -2.68
CCDC71Q8IV32 RNU6-987P-201ENST00000384759 104 ntBASIC-1.67□□□□□ -2.68
CCDC71Q8IV32 MIR4679-1-201ENST00000637619 75 ntBASIC-1.67□□□□□ -2.68
CCDC71Q8IV32 RNU6-810P-201ENST00000364001 107 ntBASIC-1.68□□□□□ -2.68
CCDC71Q8IV32 RNU6-828P-201ENST00000364876 107 ntBASIC-1.68□□□□□ -2.68
CCDC71Q8IV32 Y_RNA.511-201ENST00000384514 103 ntBASIC-1.68□□□□□ -2.68
CCDC71Q8IV32 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.69□□□□□ -2.68
CCDC71Q8IV32 SNORD116.2-201ENST00000391251 93 ntBASIC-1.69□□□□□ -2.68
CCDC71Q8IV32 RNU7-119P-201ENST00000459279 63 ntBASIC-1.69□□□□□ -2.68
CCDC71Q8IV32 RNU6-940P-201ENST00000363433 104 ntBASIC-1.7□□□□□ -2.68
CCDC71Q8IV32 Y_RNA.685-201ENST00000516532 108 ntBASIC-1.7□□□□□ -2.68
CCDC71Q8IV32 RNU6-776P-201ENST00000364403 104 ntBASIC-1.71□□□□□ -2.68
CCDC71Q8IV32 RNU6-563P-201ENST00000364872 108 ntBASIC-1.71□□□□□ -2.68
CCDC71Q8IV32 RNU6-1022P-201ENST00000365049 104 ntBASIC-1.71□□□□□ -2.68
CCDC71Q8IV32 RNU6-974P-201ENST00000384099 108 ntBASIC-1.71□□□□□ -2.68
CCDC71Q8IV32 RNA5SP106-201ENST00000517274 100 ntBASIC-1.71□□□□□ -2.68
CCDC71Q8IV32 FTX_4.1-201ENST00000616291 147 ntBASIC-1.71□□□□□ -2.68
CCDC71Q8IV32 RNU6-800P-201ENST00000384473 103 ntBASIC-1.72□□□□□ -2.68
CCDC71Q8IV32 Y_RNA.565-201ENST00000384719 101 ntBASIC-1.72□□□□□ -2.68
CCDC71Q8IV32 SNORA40B-201ENST00000385573 128 ntBASIC-1.72□□□□□ -2.68
CCDC71Q8IV32 MIR548W-201ENST00000581970 74 ntBASIC-1.72□□□□□ -2.68
CCDC71Q8IV32 Y_RNA.134-201ENST00000363435 105 ntBASIC-1.73□□□□□ -2.69
CCDC71Q8IV32 RNU6-141P-201ENST00000410499 105 ntBASIC-1.73□□□□□ -2.69
CCDC71Q8IV32 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.73□□□□□ -2.69
CCDC71Q8IV32 RNY4P9-201ENST00000363194 97 ntBASIC-1.74□□□□□ -2.69
CCDC71Q8IV32 MIR5693-201ENST00000577722 73 ntBASIC-1.74□□□□□ -2.69
CCDC71Q8IV32 Y_RNA.79-201ENST00000362992 113 ntBASIC-1.77□□□□□ -2.69
CCDC71Q8IV32 Y_RNA.519-201ENST00000384553 102 ntBASIC-1.77□□□□□ -2.69
CCDC71Q8IV32 RNU6-520P-201ENST00000384717 104 ntBASIC-1.77□□□□□ -2.69
CCDC71Q8IV32 SNORA40.16-201ENST00000517238 121 ntBASIC-1.77□□□□□ -2.69
CCDC71Q8IV32 SNX3P1Y-201ENST00000615757 176 ntBASIC-1.77□□□□□ -2.69
CCDC71Q8IV32 MIR3938-201ENST00000582157 103 ntBASIC-1.78□□□□□ -2.69
CCDC71Q8IV32 AC013734.1-201ENST00000619329 111 ntBASIC-1.78□□□□□ -2.69
CCDC71Q8IV32 RNY3P8-201ENST00000411366 126 ntBASIC-1.8□□□□□ -2.7
CCDC71Q8IV32 snoU13.10-201ENST00000459301 103 ntBASIC-1.8□□□□□ -2.7
CCDC71Q8IV32 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.81□□□□□ -2.7
CCDC71Q8IV32 MIR509-1-201ENST00000385265 94 ntBASIC-1.81□□□□□ -2.7
CCDC71Q8IV32 MIR509-2-201ENST00000390724 91 ntBASIC-1.81□□□□□ -2.7
CCDC71Q8IV32 AC110620.1-201ENST00000416042 228 ntBASIC-1.81□□□□□ -2.7
CCDC71Q8IV32 Y_RNA.59-201ENST00000362828 102 ntBASIC-1.82□□□□□ -2.7
CCDC71Q8IV32 Y_RNA.657-201ENST00000515983 102 ntBASIC-1.82□□□□□ -2.7
CCDC71Q8IV32 SNORD45.2-201ENST00000363552 72 ntBASIC-1.83□□□□□ -2.7
CCDC71Q8IV32 RNY4P10-201ENST00000365571 96 ntBASIC-1.84□□□□□ -2.7
CCDC71Q8IV32 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.84□□□□□ -2.7
CCDC71Q8IV32 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.85□□□□□ -2.71
CCDC71Q8IV32 SNORD60-201ENST00000383903 83 ntBASIC-1.85□□□□□ -2.71
CCDC71Q8IV32 Y_RNA.520-201ENST00000384556 102 ntBASIC-1.85□□□□□ -2.71
CCDC71Q8IV32 RNU6-361P-201ENST00000364454 107 ntBASIC-1.87□□□□□ -2.71
CCDC71Q8IV32 Y_RNA.386-201ENST00000383913 105 ntBASIC-1.87□□□□□ -2.71
CCDC71Q8IV32 RNU6-471P-201ENST00000383944 106 ntBASIC-1.87□□□□□ -2.71
CCDC71Q8IV32 RNU6-1275P-201ENST00000391087 107 ntBASIC-1.87□□□□□ -2.71
CCDC71Q8IV32 AC097484.2-201ENST00000509147 251 ntBASIC-1.87□□□□□ -2.71
CCDC71Q8IV32 Y_RNA.830-201ENST00000628531 96 ntBASIC-1.87□□□□□ -2.71
CCDC71Q8IV32 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.87□□□□□ -2.71
CCDC71Q8IV32 U6.97-201ENST00000636904 101 ntBASIC-1.87□□□□□ -2.71
CCDC71Q8IV32 SNORD18C-201ENST00000362704 69 ntBASIC-1.88□□□□□ -2.71
CCDC71Q8IV32 AL451105.1-201ENST00000450005 189 ntBASIC-1.88□□□□□ -2.71
CCDC71Q8IV32 RNU6-1277P-201ENST00000364561 107 ntBASIC-1.89□□□□□ -2.71
CCDC71Q8IV32 AC114801.3-201ENST00000510231 177 ntBASIC-1.89□□□□□ -2.71
CCDC71Q8IV32 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.9□□□□□ -2.71
CCDC71Q8IV32 MIR202-201ENST00000362219 110 ntBASIC-1.9□□□□□ -2.71
CCDC71Q8IV32 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.9□□□□□ -2.71
CCDC71Q8IV32 SNORA17.4-201ENST00000391287 132 ntBASIC-1.9□□□□□ -2.71
CCDC71Q8IV32 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.91□□□□□ -2.72
CCDC71Q8IV32 MIR548N-201ENST00000408742 75 ntBASIC-1.91□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 254.9 ms