Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 SNORA27.2-201ENST00000363365 126 ntBASIC-1.27□□□□□ -2.61
KRT28Q7Z3Y7 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.27□□□□□ -2.61
KRT28Q7Z3Y7 MIR4756-201ENST00000577874 78 ntBASIC-1.27□□□□□ -2.61
KRT28Q7Z3Y7 MIR466-201ENST00000580653 84 ntBASIC-1.27□□□□□ -2.61
KRT28Q7Z3Y7 MIR664B-201ENST00000626756 61 ntBASIC-1.27□□□□□ -2.61
KRT28Q7Z3Y7 RNU7-119P-201ENST00000459279 63 ntBASIC-1.28□□□□□ -2.61
KRT28Q7Z3Y7 RNU6-590P-201ENST00000365039 107 ntBASIC-1.29□□□□□ -2.62
KRT28Q7Z3Y7 SNORA40.16-201ENST00000517238 121 ntBASIC-1.29□□□□□ -2.62
KRT28Q7Z3Y7 SNORA40B-201ENST00000385573 128 ntBASIC-1.3□□□□□ -2.62
KRT28Q7Z3Y7 SNORD63.2-201ENST00000516303 64 ntBASIC-1.3□□□□□ -2.62
KRT28Q7Z3Y7 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.3□□□□□ -2.62
KRT28Q7Z3Y7 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.31□□□□□ -2.62
KRT28Q7Z3Y7 RNU6-810P-201ENST00000364001 107 ntBASIC-1.31□□□□□ -2.62
KRT28Q7Z3Y7 RNU6-520P-201ENST00000384717 104 ntBASIC-1.31□□□□□ -2.62
KRT28Q7Z3Y7 RNU6-974P-201ENST00000384099 108 ntBASIC-1.32□□□□□ -2.62
KRT28Q7Z3Y7 RNU4-88P-201ENST00000411220 86 ntBASIC-1.32□□□□□ -2.62
KRT28Q7Z3Y7 RNY3P8-201ENST00000411366 126 ntBASIC-1.32□□□□□ -2.62
KRT28Q7Z3Y7 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.32□□□□□ -2.62
KRT28Q7Z3Y7 SNORD116.2-201ENST00000391251 93 ntBASIC-1.33□□□□□ -2.62
KRT28Q7Z3Y7 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.33□□□□□ -2.62
KRT28Q7Z3Y7 RNU6-980P-201ENST00000516925 103 ntBASIC-1.33□□□□□ -2.62
KRT28Q7Z3Y7 MIR548W-201ENST00000581970 74 ntBASIC-1.33□□□□□ -2.62
KRT28Q7Z3Y7 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.34□□□□□ -2.62
KRT28Q7Z3Y7 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.34□□□□□ -2.62
KRT28Q7Z3Y7 U6.97-201ENST00000636904 101 ntBASIC-1.34□□□□□ -2.62
KRT28Q7Z3Y7 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.35□□□□□ -2.63
KRT28Q7Z3Y7 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.35□□□□□ -2.63
KRT28Q7Z3Y7 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.35□□□□□ -2.63
KRT28Q7Z3Y7 snoU13.10-201ENST00000459301 103 ntBASIC-1.36□□□□□ -2.63
KRT28Q7Z3Y7 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.36□□□□□ -2.63
KRT28Q7Z3Y7 RNU6-828P-201ENST00000364876 107 ntBASIC-1.37□□□□□ -2.63
KRT28Q7Z3Y7 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.37□□□□□ -2.63
KRT28Q7Z3Y7 MIR581-201ENST00000384895 96 ntBASIC-1.37□□□□□ -2.63
KRT28Q7Z3Y7 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.37□□□□□ -2.63
KRT28Q7Z3Y7 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.37□□□□□ -2.63
KRT28Q7Z3Y7 SNORD18C-201ENST00000362704 69 ntBASIC-1.38□□□□□ -2.63
KRT28Q7Z3Y7 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.38□□□□□ -2.63
KRT28Q7Z3Y7 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.38□□□□□ -2.63
KRT28Q7Z3Y7 RNA5SP405-201ENST00000363059 114 ntBASIC-1.4□□□□□ -2.63
KRT28Q7Z3Y7 MIR548N-201ENST00000408742 75 ntBASIC-1.4□□□□□ -2.63
KRT28Q7Z3Y7 MIR202-201ENST00000362219 110 ntBASIC-1.42□□□□□ -2.64
KRT28Q7Z3Y7 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-1.42□□□□□ -2.64
KRT28Q7Z3Y7 RNU6-361P-201ENST00000364454 107 ntBASIC-1.43□□□□□ -2.64
KRT28Q7Z3Y7 SNORD60-201ENST00000383903 83 ntBASIC-1.43□□□□□ -2.64
KRT28Q7Z3Y7 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.43□□□□□ -2.64
KRT28Q7Z3Y7 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.43□□□□□ -2.64
KRT28Q7Z3Y7 MIR4748-201ENST00000578076 82 ntBASIC-1.43□□□□□ -2.64
KRT28Q7Z3Y7 RNU6-194P-201ENST00000363862 105 ntBASIC-1.44□□□□□ -2.64
KRT28Q7Z3Y7 AC139453.2-201ENST00000487255 133 ntBASIC-1.44□□□□□ -2.64
KRT28Q7Z3Y7 RNU6-118P-201ENST00000516552 102 ntBASIC-1.44□□□□□ -2.64
KRT28Q7Z3Y7 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.45□□□□□ -2.64
KRT28Q7Z3Y7 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.45□□□□□ -2.64
KRT28Q7Z3Y7 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.45□□□□□ -2.64
KRT28Q7Z3Y7 SNORA17.4-201ENST00000391287 132 ntBASIC-1.45□□□□□ -2.64
KRT28Q7Z3Y7 AC097484.2-201ENST00000509147 251 ntBASIC-1.45□□□□□ -2.64
KRT28Q7Z3Y7 FTX_4.1-201ENST00000616291 147 ntBASIC-1.46□□□□□ -2.64
KRT28Q7Z3Y7 RNU6-446P-201ENST00000362827 106 ntBASIC-1.47□□□□□ -2.64
KRT28Q7Z3Y7 AC125388.1-201ENST00000459631 156 ntBASIC-1.47□□□□□ -2.64
KRT28Q7Z3Y7 RNY4P7-201ENST00000364600 96 ntBASIC-1.48□□□□□ -2.65
KRT28Q7Z3Y7 RNU6-68P-201ENST00000516576 104 ntBASIC-1.48□□□□□ -2.65
KRT28Q7Z3Y7 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.49□□□□□ -2.65
KRT28Q7Z3Y7 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.49□□□□□ -2.65
KRT28Q7Z3Y7 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.49□□□□□ -2.65
KRT28Q7Z3Y7 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.49□□□□□ -2.65
KRT28Q7Z3Y7 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.49□□□□□ -2.65
KRT28Q7Z3Y7 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.49□□□□□ -2.65
KRT28Q7Z3Y7 MIR3139-201ENST00000579145 76 ntBASIC-1.5□□□□□ -2.65
KRT28Q7Z3Y7 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.51□□□□□ -2.65
KRT28Q7Z3Y7 RNU6-530P-201ENST00000391180 107 ntBASIC-1.51□□□□□ -2.65
KRT28Q7Z3Y7 SNORD113-3-201ENST00000364830 72 ntBASIC-1.52□□□□□ -2.65
KRT28Q7Z3Y7 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.52□□□□□ -2.65
KRT28Q7Z3Y7 AL451105.1-201ENST00000450005 189 ntBASIC-1.52□□□□□ -2.65
KRT28Q7Z3Y7 RNU6-419P-201ENST00000517030 63 ntBASIC-1.52□□□□□ -2.65
KRT28Q7Z3Y7 MIR379-201ENST00000362218 67 ntBASIC-1.53□□□□□ -2.65
KRT28Q7Z3Y7 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.53□□□□□ -2.65
KRT28Q7Z3Y7 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.53□□□□□ -2.65
KRT28Q7Z3Y7 MIR4426-201ENST00000640330 63 ntBASIC-1.53□□□□□ -2.65
KRT28Q7Z3Y7 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.54□□□□□ -2.66
KRT28Q7Z3Y7 RNU6-912P-201ENST00000363800 104 ntBASIC-1.55□□□□□ -2.66
KRT28Q7Z3Y7 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.55□□□□□ -2.66
KRT28Q7Z3Y7 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.55□□□□□ -2.66
KRT28Q7Z3Y7 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.55□□□□□ -2.66
KRT28Q7Z3Y7 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.55□□□□□ -2.66
KRT28Q7Z3Y7 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.56□□□□□ -2.66
KRT28Q7Z3Y7 SNORD45.2-201ENST00000363552 72 ntBASIC-1.56□□□□□ -2.66
KRT28Q7Z3Y7 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.56□□□□□ -2.66
KRT28Q7Z3Y7 RNU6-141P-201ENST00000410499 105 ntBASIC-1.57□□□□□ -2.66
KRT28Q7Z3Y7 RNY4P9-201ENST00000363194 97 ntBASIC-1.58□□□□□ -2.66
KRT28Q7Z3Y7 RNU6-829P-201ENST00000363700 112 ntBASIC-1.58□□□□□ -2.66
KRT28Q7Z3Y7 MT-TM-201ENST00000387377 68 ntBASIC-1.58□□□□□ -2.66
KRT28Q7Z3Y7 RNU6-300P-201ENST00000459080 104 ntBASIC-1.58□□□□□ -2.66
KRT28Q7Z3Y7 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.58□□□□□ -2.66
KRT28Q7Z3Y7 RNU6-176P-201ENST00000517196 105 ntBASIC-1.58□□□□□ -2.66
KRT28Q7Z3Y7 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.59□□□□□ -2.66
KRT28Q7Z3Y7 RNU6-119P-201ENST00000364882 107 ntBASIC-1.59□□□□□ -2.66
KRT28Q7Z3Y7 MIR633-201ENST00000384821 98 ntBASIC-1.6□□□□□ -2.67
KRT28Q7Z3Y7 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.61□□□□□ -2.67
KRT28Q7Z3Y7 RNU6-742P-201ENST00000365289 107 ntBASIC-1.61□□□□□ -2.67
KRT28Q7Z3Y7 Y_RNA.519-201ENST00000384553 102 ntBASIC-1.61□□□□□ -2.67
KRT28Q7Z3Y7 MIR548X-201ENST00000580069 75 ntBASIC-1.61□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 222.6 ms