Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 MIR548AM-201ENST00000584298 74 ntBASIC-1.29□□□□□ -2.62
ZNF544Q6NX49 AL451105.1-201ENST00000450005 189 ntBASIC-1.3□□□□□ -2.62
ZNF544Q6NX49 SNORD45.2-201ENST00000363552 72 ntBASIC-1.31□□□□□ -2.62
ZNF544Q6NX49 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.31□□□□□ -2.62
ZNF544Q6NX49 MIR581-201ENST00000384895 96 ntBASIC-1.31□□□□□ -2.62
ZNF544Q6NX49 MIR198-201ENST00000637333 62 ntBASIC-1.31□□□□□ -2.62
ZNF544Q6NX49 MIR365A-201ENST00000362260 87 ntBASIC-1.32□□□□□ -2.62
ZNF544Q6NX49 RNU6-361P-201ENST00000364454 107 ntBASIC-1.32□□□□□ -2.62
ZNF544Q6NX49 RNU6-419P-201ENST00000517030 63 ntBASIC-1.32□□□□□ -2.62
ZNF544Q6NX49 RNU6-590P-201ENST00000365039 107 ntBASIC-1.33□□□□□ -2.62
ZNF544Q6NX49 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.33□□□□□ -2.62
ZNF544Q6NX49 RNU6-983P-201ENST00000516004 103 ntBASIC-1.33□□□□□ -2.62
ZNF544Q6NX49 MIR548W-201ENST00000581970 74 ntBASIC-1.33□□□□□ -2.62
ZNF544Q6NX49 MIR4441-201ENST00000582623 100 ntBASIC-1.33□□□□□ -2.62
ZNF544Q6NX49 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.34□□□□□ -2.62
ZNF544Q6NX49 MIR664B-201ENST00000626756 61 ntBASIC-1.34□□□□□ -2.62
ZNF544Q6NX49 U6.97-201ENST00000636904 101 ntBASIC-1.34□□□□□ -2.62
ZNF544Q6NX49 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.35□□□□□ -2.63
ZNF544Q6NX49 RNU4-88P-201ENST00000411220 86 ntBASIC-1.35□□□□□ -2.63
ZNF544Q6NX49 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.35□□□□□ -2.63
ZNF544Q6NX49 SNORD60-201ENST00000383903 83 ntBASIC-1.36□□□□□ -2.63
ZNF544Q6NX49 MIR548N-201ENST00000408742 75 ntBASIC-1.36□□□□□ -2.63
ZNF544Q6NX49 snoU13.10-201ENST00000459301 103 ntBASIC-1.37□□□□□ -2.63
ZNF544Q6NX49 MIR202-201ENST00000362219 110 ntBASIC-1.38□□□□□ -2.63
ZNF544Q6NX49 SNORD18C-201ENST00000362704 69 ntBASIC-1.38□□□□□ -2.63
ZNF544Q6NX49 RNU6-446P-201ENST00000362827 106 ntBASIC-1.38□□□□□ -2.63
ZNF544Q6NX49 RNU6-530P-201ENST00000391180 107 ntBASIC-1.38□□□□□ -2.63
ZNF544Q6NX49 SNORA17.4-201ENST00000391287 132 ntBASIC-1.38□□□□□ -2.63
ZNF544Q6NX49 RNU6-980P-201ENST00000516925 103 ntBASIC-1.4□□□□□ -2.63
ZNF544Q6NX49 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.4□□□□□ -2.63
ZNF544Q6NX49 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.41□□□□□ -2.64
ZNF544Q6NX49 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.41□□□□□ -2.64
ZNF544Q6NX49 MIR548X-201ENST00000580069 75 ntBASIC-1.41□□□□□ -2.64
ZNF544Q6NX49 U4.2-201ENST00000618561 85 ntBASIC-1.41□□□□□ -2.64
ZNF544Q6NX49 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.42□□□□□ -2.64
ZNF544Q6NX49 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.42□□□□□ -2.64
ZNF544Q6NX49 Y_RNA.722-201ENST00000517279 114 ntBASIC-1.42□□□□□ -2.64
ZNF544Q6NX49 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.42□□□□□ -2.64
ZNF544Q6NX49 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.42□□□□□ -2.64
ZNF544Q6NX49 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.43□□□□□ -2.64
ZNF544Q6NX49 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.43□□□□□ -2.64
ZNF544Q6NX49 RNU6-68P-201ENST00000516576 104 ntBASIC-1.43□□□□□ -2.64
ZNF544Q6NX49 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.43□□□□□ -2.64
ZNF544Q6NX49 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.44□□□□□ -2.64
ZNF544Q6NX49 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.44□□□□□ -2.64
ZNF544Q6NX49 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.44□□□□□ -2.64
ZNF544Q6NX49 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.44□□□□□ -2.64
ZNF544Q6NX49 MIR4426-201ENST00000640330 63 ntBASIC-1.44□□□□□ -2.64
ZNF544Q6NX49 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-1.45□□□□□ -2.64
ZNF544Q6NX49 AC125388.1-201ENST00000459631 156 ntBASIC-1.45□□□□□ -2.64
ZNF544Q6NX49 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.46□□□□□ -2.64
ZNF544Q6NX49 RNU6-176P-201ENST00000517196 105 ntBASIC-1.46□□□□□ -2.64
ZNF544Q6NX49 RNA5SP405-201ENST00000363059 114 ntBASIC-1.47□□□□□ -2.64
ZNF544Q6NX49 MIR4723-201ENST00000585070 81 ntBASIC-1.47□□□□□ -2.64
ZNF544Q6NX49 RNU6-829P-201ENST00000363700 112 ntBASIC-1.48□□□□□ -2.65
ZNF544Q6NX49 SNORD114-3-201ENST00000364969 75 ntBASIC-1.49□□□□□ -2.65
ZNF544Q6NX49 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.49□□□□□ -2.65
ZNF544Q6NX49 RNU6-1312P-201ENST00000362425 108 ntBASIC-1.5□□□□□ -2.65
ZNF544Q6NX49 SNORD113-4-201ENST00000364802 75 ntBASIC-1.5□□□□□ -2.65
ZNF544Q6NX49 RNU6-300P-201ENST00000459080 104 ntBASIC-1.5□□□□□ -2.65
ZNF544Q6NX49 AC139453.2-201ENST00000487255 133 ntBASIC-1.5□□□□□ -2.65
ZNF544Q6NX49 RNY4P27-201ENST00000363341 96 ntBASIC-1.51□□□□□ -2.65
ZNF544Q6NX49 MIR4748-201ENST00000578076 82 ntBASIC-1.51□□□□□ -2.65
ZNF544Q6NX49 MIR379-201ENST00000362218 67 ntBASIC-1.52□□□□□ -2.65
ZNF544Q6NX49 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.52□□□□□ -2.65
ZNF544Q6NX49 RNU6-742P-201ENST00000365289 107 ntBASIC-1.52□□□□□ -2.65
ZNF544Q6NX49 MIR633-201ENST00000384821 98 ntBASIC-1.52□□□□□ -2.65
ZNF544Q6NX49 AC097484.2-201ENST00000509147 251 ntBASIC-1.52□□□□□ -2.65
ZNF544Q6NX49 RNU6-118P-201ENST00000516552 102 ntBASIC-1.52□□□□□ -2.65
ZNF544Q6NX49 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.53□□□□□ -2.65
ZNF544Q6NX49 SNORD113-3-201ENST00000364830 72 ntBASIC-1.53□□□□□ -2.65
ZNF544Q6NX49 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.53□□□□□ -2.65
ZNF544Q6NX49 AC079150.2-201ENST00000443733 78 ntBASIC-1.53□□□□□ -2.65
ZNF544Q6NX49 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.53□□□□□ -2.65
ZNF544Q6NX49 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.54□□□□□ -2.66
ZNF544Q6NX49 RNU6-194P-201ENST00000363862 105 ntBASIC-1.55□□□□□ -2.66
ZNF544Q6NX49 FTX_4.1-201ENST00000616291 147 ntBASIC-1.55□□□□□ -2.66
ZNF544Q6NX49 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.56□□□□□ -2.66
ZNF544Q6NX49 RNU6-912P-201ENST00000363800 104 ntBASIC-1.56□□□□□ -2.66
ZNF544Q6NX49 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.56□□□□□ -2.66
ZNF544Q6NX49 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.56□□□□□ -2.66
ZNF544Q6NX49 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.56□□□□□ -2.66
ZNF544Q6NX49 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.56□□□□□ -2.66
ZNF544Q6NX49 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.56□□□□□ -2.66
ZNF544Q6NX49 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.56□□□□□ -2.66
ZNF544Q6NX49 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.56□□□□□ -2.66
ZNF544Q6NX49 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.57□□□□□ -2.66
ZNF544Q6NX49 MIR3139-201ENST00000579145 76 ntBASIC-1.57□□□□□ -2.66
ZNF544Q6NX49 RNU4-33P-201ENST00000364316 85 ntBASIC-1.58□□□□□ -2.66
ZNF544Q6NX49 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.58□□□□□ -2.66
ZNF544Q6NX49 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.6□□□□□ -2.67
ZNF544Q6NX49 RNU6-499P-201ENST00000365615 107 ntBASIC-1.6□□□□□ -2.67
ZNF544Q6NX49 RNU6-141P-201ENST00000410499 105 ntBASIC-1.6□□□□□ -2.67
ZNF544Q6NX49 MIR1207-201ENST00000408249 87 ntBASIC-1.62□□□□□ -2.67
ZNF544Q6NX49 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.63□□□□□ -2.67
ZNF544Q6NX49 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.64□□□□□ -2.67
ZNF544Q6NX49 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.65□□□□□ -2.67
ZNF544Q6NX49 MT-TM-201ENST00000387377 68 ntBASIC-1.65□□□□□ -2.67
ZNF544Q6NX49 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.65□□□□□ -2.67
ZNF544Q6NX49 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.65□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 199.4 ms