Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 MIR548AL-201ENST00000578416 97 ntBASIC-0.82□□□□□ -2.54
PRPF40BQ6NWY9 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.82□□□□□ -2.54
PRPF40BQ6NWY9 MIR4426-201ENST00000640330 63 ntBASIC-0.82□□□□□ -2.54
PRPF40BQ6NWY9 MIR202-201ENST00000362219 110 ntBASIC-0.83□□□□□ -2.54
PRPF40BQ6NWY9 RNA5SP180-201ENST00000516181 101 ntBASIC-0.83□□□□□ -2.54
PRPF40BQ6NWY9 MIR6818-201ENST00000621576 65 ntBASIC-0.83□□□□□ -2.54
PRPF40BQ6NWY9 MIR3115-201ENST00000577915 68 ntBASIC-0.84□□□□□ -2.54
PRPF40BQ6NWY9 MIR4441-201ENST00000582623 100 ntBASIC-0.84□□□□□ -2.54
PRPF40BQ6NWY9 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-0.85□□□□□ -2.55
PRPF40BQ6NWY9 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.87□□□□□ -2.55
PRPF40BQ6NWY9 MIR1285-2-201ENST00000408311 88 ntBASIC-0.87□□□□□ -2.55
PRPF40BQ6NWY9 RNY4P27-201ENST00000363341 96 ntBASIC-0.88□□□□□ -2.55
PRPF40BQ6NWY9 RNU6-742P-201ENST00000365289 107 ntBASIC-0.88□□□□□ -2.55
PRPF40BQ6NWY9 MIR4306-201ENST00000583390 91 ntBASIC-0.88□□□□□ -2.55
PRPF40BQ6NWY9 RNU6-361P-201ENST00000364454 107 ntBASIC-0.89□□□□□ -2.55
PRPF40BQ6NWY9 DLEU2_4.2-201ENST00000616613 58 ntBASIC-0.89□□□□□ -2.55
PRPF40BQ6NWY9 RNU6-1204P-201ENST00000363948 107 ntBASIC-0.9□□□□□ -2.55
PRPF40BQ6NWY9 SNORD60-201ENST00000383903 83 ntBASIC-0.9□□□□□ -2.55
PRPF40BQ6NWY9 MIR8485-201ENST00000401372 91 ntBASIC-0.9□□□□□ -2.55
PRPF40BQ6NWY9 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.9□□□□□ -2.55
PRPF40BQ6NWY9 SNORA17.4-201ENST00000391287 132 ntBASIC-0.91□□□□□ -2.56
PRPF40BQ6NWY9 AC018880.2-201ENST00000414265 201 ntBASIC-0.91□□□□□ -2.56
PRPF40BQ6NWY9 Y_RNA.684-201ENST00000516510 99 ntBASIC-0.91□□□□□ -2.56
PRPF40BQ6NWY9 MIR3165-201ENST00000579874 75 ntBASIC-0.91□□□□□ -2.56
PRPF40BQ6NWY9 MIR548F3-201ENST00000408509 87 ntBASIC-0.93□□□□□ -2.56
PRPF40BQ6NWY9 AC120024.2-201ENST00000576526 175 ntBASIC-0.93□□□□□ -2.56
PRPF40BQ6NWY9 RNU6-164P-201ENST00000364604 103 ntBASIC-0.94□□□□□ -2.56
PRPF40BQ6NWY9 RNU6-300P-201ENST00000459080 104 ntBASIC-0.94□□□□□ -2.56
PRPF40BQ6NWY9 AC091912.2-201ENST00000624798 167 ntBASIC-0.94□□□□□ -2.56
PRPF40BQ6NWY9 RNU6-576P-201ENST00000390854 102 ntBASIC-0.95□□□□□ -2.56
PRPF40BQ6NWY9 MIR6502-201ENST00000617296 76 ntBASIC-0.96□□□□□ -2.56
PRPF40BQ6NWY9 MIR6874-201ENST00000635894 71 ntBASIC-0.96□□□□□ -2.56
PRPF40BQ6NWY9 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.98□□□□□ -2.57
PRPF40BQ6NWY9 RNU6-706P-201ENST00000517229 104 ntBASIC-0.98□□□□□ -2.57
PRPF40BQ6NWY9 RNU6-176P-201ENST00000517196 105 ntBASIC-0.99□□□□□ -2.57
PRPF40BQ6NWY9 AC138207.3-201ENST00000585289 166 ntBASIC-1□□□□□ -2.57
PRPF40BQ6NWY9 RNU6-563P-201ENST00000364872 108 ntBASIC-1.01□□□□□ -2.57
PRPF40BQ6NWY9 AC013734.1-201ENST00000619329 111 ntBASIC-1.01□□□□□ -2.57
PRPF40BQ6NWY9 U6.97-201ENST00000636904 101 ntBASIC-1.01□□□□□ -2.57
PRPF40BQ6NWY9 MIR4317-201ENST00000637586 65 ntBASIC-1.01□□□□□ -2.57
PRPF40BQ6NWY9 MIR545-201ENST00000385085 106 ntBASIC-1.02□□□□□ -2.57
PRPF40BQ6NWY9 RNU6-79P-201ENST00000362511 107 ntBASIC-1.03□□□□□ -2.57
PRPF40BQ6NWY9 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.04□□□□□ -2.58
PRPF40BQ6NWY9 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.04□□□□□ -2.58
PRPF40BQ6NWY9 MIR548N-201ENST00000408742 75 ntBASIC-1.06□□□□□ -2.58
PRPF40BQ6NWY9 HLA-S-202ENST00000425174 53 ntBASIC-1.06□□□□□ -2.58
PRPF40BQ6NWY9 MIR5591-201ENST00000578248 65 ntBASIC-1.06□□□□□ -2.58
PRPF40BQ6NWY9 MIR4520-1-201ENST00000582609 70 ntBASIC-1.06□□□□□ -2.58
PRPF40BQ6NWY9 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.07□□□□□ -2.58
PRPF40BQ6NWY9 MIR4770-201ENST00000579149 58 ntBASIC-1.08□□□□□ -2.58
PRPF40BQ6NWY9 RNU6-986P-201ENST00000363133 102 ntBASIC-1.1□□□□□ -2.59
PRPF40BQ6NWY9 MIR1246-201ENST00000636535 73 ntBASIC-1.1□□□□□ -2.59
PRPF40BQ6NWY9 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.11□□□□□ -2.59
PRPF40BQ6NWY9 RNU6-822P-201ENST00000362707 106 ntBASIC-1.12□□□□□ -2.59
PRPF40BQ6NWY9 RNA5SP86-201ENST00000390869 98 ntBASIC-1.12□□□□□ -2.59
PRPF40BQ6NWY9 RNU6-400P-201ENST00000391173 106 ntBASIC-1.12□□□□□ -2.59
PRPF40BQ6NWY9 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.14□□□□□ -2.59
PRPF40BQ6NWY9 RNU6-1008P-201ENST00000384160 104 ntBASIC-1.14□□□□□ -2.59
PRPF40BQ6NWY9 SNORD18C-201ENST00000362704 69 ntBASIC-1.16□□□□□ -2.6
PRPF40BQ6NWY9 RNU6-226P-201ENST00000363778 107 ntBASIC-1.16□□□□□ -2.6
PRPF40BQ6NWY9 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.16□□□□□ -2.6
PRPF40BQ6NWY9 RNY4P7-201ENST00000364600 96 ntBASIC-1.17□□□□□ -2.6
PRPF40BQ6NWY9 MIR548H4-201ENST00000408689 111 ntBASIC-1.17□□□□□ -2.6
PRPF40BQ6NWY9 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.18□□□□□ -2.6
PRPF40BQ6NWY9 MIR548H1-201ENST00000408610 102 ntBASIC-1.18□□□□□ -2.6
PRPF40BQ6NWY9 MIR487B-201ENST00000385021 84 ntBASIC-1.19□□□□□ -2.6
PRPF40BQ6NWY9 RNU6-695P-201ENST00000391157 104 ntBASIC-1.19□□□□□ -2.6
PRPF40BQ6NWY9 RNU6-1326P-201ENST00000391262 107 ntBASIC-1.19□□□□□ -2.6
PRPF40BQ6NWY9 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.2□□□□□ -2.6
PRPF40BQ6NWY9 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.2□□□□□ -2.6
PRPF40BQ6NWY9 MIR581-201ENST00000384895 96 ntBASIC-1.22□□□□□ -2.6
PRPF40BQ6NWY9 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.23□□□□□ -2.61
PRPF40BQ6NWY9 MIR3123-201ENST00000583417 75 ntBASIC-1.23□□□□□ -2.61
PRPF40BQ6NWY9 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.25□□□□□ -2.61
PRPF40BQ6NWY9 RNU6-119P-201ENST00000364882 107 ntBASIC-1.26□□□□□ -2.61
PRPF40BQ6NWY9 MIR379-201ENST00000362218 67 ntBASIC-1.27□□□□□ -2.61
PRPF40BQ6NWY9 Y_RNA.345-201ENST00000365384 92 ntBASIC-1.27□□□□□ -2.61
PRPF40BQ6NWY9 RNU6-841P-201ENST00000383872 107 ntBASIC-1.27□□□□□ -2.61
PRPF40BQ6NWY9 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.28□□□□□ -2.61
PRPF40BQ6NWY9 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.28□□□□□ -2.61
PRPF40BQ6NWY9 MIR548AM-201ENST00000584298 74 ntBASIC-1.28□□□□□ -2.61
PRPF40BQ6NWY9 SNORD18.1-201ENST00000363807 70 ntBASIC-1.29□□□□□ -2.62
PRPF40BQ6NWY9 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.29□□□□□ -2.62
PRPF40BQ6NWY9 AC108019.1-201ENST00000512540 175 ntBASIC-1.29□□□□□ -2.62
PRPF40BQ6NWY9 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.29□□□□□ -2.62
PRPF40BQ6NWY9 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.3□□□□□ -2.62
PRPF40BQ6NWY9 MIR496-201ENST00000385226 102 ntBASIC-1.3□□□□□ -2.62
PRPF40BQ6NWY9 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.3□□□□□ -2.62
PRPF40BQ6NWY9 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.32□□□□□ -2.62
PRPF40BQ6NWY9 MIR4756-201ENST00000577874 78 ntBASIC-1.32□□□□□ -2.62
PRPF40BQ6NWY9 MIR548W-201ENST00000581970 74 ntBASIC-1.32□□□□□ -2.62
PRPF40BQ6NWY9 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.33□□□□□ -2.62
PRPF40BQ6NWY9 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.33□□□□□ -2.62
PRPF40BQ6NWY9 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.34□□□□□ -2.62
PRPF40BQ6NWY9 RNU6-59P-201ENST00000384787 107 ntBASIC-1.34□□□□□ -2.62
PRPF40BQ6NWY9 RNU6-983P-201ENST00000516004 103 ntBASIC-1.34□□□□□ -2.62
PRPF40BQ6NWY9 snoU13.10-201ENST00000459301 103 ntBASIC-1.35□□□□□ -2.63
PRPF40BQ6NWY9 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.38□□□□□ -2.63
PRPF40BQ6NWY9 MIR664B-201ENST00000626756 61 ntBASIC-1.38□□□□□ -2.63
PRPF40BQ6NWY9 RNU6-68P-201ENST00000516576 104 ntBASIC-1.41□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 251 ms