Protein–RNA interactions for Protein: Q01955

COL4A3, Collagen alpha-3(IV) chain, humanhuman

Predictions only

Length 1,670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3Q01955 RNY4-201ENST00000516507 96 ntBASIC-0.38□□□□□ -2.47
COL4A3Q01955 SNORD60-201ENST00000383903 83 ntBASIC-0.4□□□□□ -2.47
COL4A3Q01955 MIR3115-201ENST00000577915 68 ntBASIC-0.4□□□□□ -2.47
COL4A3Q01955 RNU6-1204P-201ENST00000363948 107 ntBASIC-0.41□□□□□ -2.48
COL4A3Q01955 RNU6-431P-201ENST00000383874 107 ntBASIC-0.41□□□□□ -2.48
COL4A3Q01955 MIR147A-201ENST00000385079 72 ntBASIC-0.41□□□□□ -2.48
COL4A3Q01955 SNORD64-201ENST00000386683 67 ntBASIC-0.41□□□□□ -2.48
COL4A3Q01955 AC090616.4-201ENST00000448026 115 ntBASIC-0.41□□□□□ -2.48
COL4A3Q01955 RNA5SP26-201ENST00000362406 119 ntBASIC-0.42□□□□□ -2.48
COL4A3Q01955 SNORA17.4-201ENST00000391287 132 ntBASIC-0.42□□□□□ -2.48
COL4A3Q01955 RNY3P8-201ENST00000411366 126 ntBASIC-0.42□□□□□ -2.48
COL4A3Q01955 MIR202-201ENST00000362219 110 ntBASIC-0.43□□□□□ -2.48
COL4A3Q01955 MIR4426-201ENST00000640330 63 ntBASIC-0.43□□□□□ -2.48
COL4A3Q01955 RNA5SP180-201ENST00000516181 101 ntBASIC-0.44□□□□□ -2.48
COL4A3Q01955 SNORD83B-201ENST00000386745 93 ntBASIC-0.45□□□□□ -2.48
COL4A3Q01955 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.45□□□□□ -2.48
COL4A3Q01955 RNU6-176P-201ENST00000517196 105 ntBASIC-0.45□□□□□ -2.48
COL4A3Q01955 MIR1246-201ENST00000636535 73 ntBASIC-0.45□□□□□ -2.48
COL4A3Q01955 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-0.46□□□□□ -2.48
COL4A3Q01955 MIR4317-201ENST00000637586 65 ntBASIC-0.46□□□□□ -2.48
COL4A3Q01955 SNORD114-25-201ENST00000363742 72 ntBASIC-0.46□□□□□ -2.48
COL4A3Q01955 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.46□□□□□ -2.48
COL4A3Q01955 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.47□□□□□ -2.48
COL4A3Q01955 RNU6-300P-201ENST00000459080 104 ntBASIC-0.47□□□□□ -2.48
COL4A3Q01955 AC120024.2-201ENST00000576526 175 ntBASIC-0.49□□□□□ -2.49
COL4A3Q01955 RNA5SP93-201ENST00000362525 114 ntBASIC-0.49□□□□□ -2.49
COL4A3Q01955 snoU83B.1-201ENST00000517136 88 ntBASIC-0.5□□□□□ -2.49
COL4A3Q01955 AC013734.1-201ENST00000619329 111 ntBASIC-0.5□□□□□ -2.49
COL4A3Q01955 MIR382-201ENST00000637119 76 ntBASIC-0.5□□□□□ -2.49
COL4A3Q01955 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.51□□□□□ -2.49
COL4A3Q01955 RNU6-986P-201ENST00000363133 102 ntBASIC-0.52□□□□□ -2.49
COL4A3Q01955 AC018880.2-201ENST00000414265 201 ntBASIC-0.52□□□□□ -2.49
COL4A3Q01955 MIR6818-201ENST00000621576 65 ntBASIC-0.52□□□□□ -2.49
COL4A3Q01955 Y_RNA.543-201ENST00000384649 107 ntBASIC-0.53□□□□□ -2.49
COL4A3Q01955 MIR548H4-201ENST00000408689 111 ntBASIC-0.53□□□□□ -2.49
COL4A3Q01955 RNU6-822P-201ENST00000362707 106 ntBASIC-0.53□□□□□ -2.49
COL4A3Q01955 MIR496-201ENST00000385226 102 ntBASIC-0.53□□□□□ -2.49
COL4A3Q01955 MIR548N-201ENST00000408742 75 ntBASIC-0.53□□□□□ -2.49
COL4A3Q01955 RNU6-1008P-201ENST00000384160 104 ntBASIC-0.54□□□□□ -2.5
COL4A3Q01955 AL500527.2-201ENST00000454105 95 ntBASIC-0.55□□□□□ -2.5
COL4A3Q01955 RNU6-164P-201ENST00000364604 103 ntBASIC-0.56□□□□□ -2.5
COL4A3Q01955 Y_RNA.781-201ENST00000620301 103 ntBASIC-0.56□□□□□ -2.5
COL4A3Q01955 U6.97-201ENST00000636904 101 ntBASIC-0.56□□□□□ -2.5
COL4A3Q01955 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.56□□□□□ -2.5
COL4A3Q01955 RNU6-1047P-201ENST00000364418 107 ntBASIC-0.57□□□□□ -2.5
COL4A3Q01955 RNU6-563P-201ENST00000364872 108 ntBASIC-0.58□□□□□ -2.5
COL4A3Q01955 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.58□□□□□ -2.5
COL4A3Q01955 RNU6-706P-201ENST00000517229 104 ntBASIC-0.58□□□□□ -2.5
COL4A3Q01955 MIR4306-201ENST00000583390 91 ntBASIC-0.58□□□□□ -2.5
COL4A3Q01955 MIR4499-201ENST00000584834 69 ntBASIC-0.58□□□□□ -2.5
COL4A3Q01955 RNU6-1247P-201ENST00000516622 98 ntBASIC-0.59□□□□□ -2.5
COL4A3Q01955 RNU6-79P-201ENST00000362511 107 ntBASIC-0.61□□□□□ -2.51
COL4A3Q01955 Y_RNA.223-201ENST00000364290 113 ntBASIC-0.62□□□□□ -2.51
COL4A3Q01955 Y_RNA.421-201ENST00000384052 101 ntBASIC-0.62□□□□□ -2.51
COL4A3Q01955 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.62□□□□□ -2.51
COL4A3Q01955 MIR581-201ENST00000384895 96 ntBASIC-0.62□□□□□ -2.51
COL4A3Q01955 AC091912.2-201ENST00000624798 167 ntBASIC-0.62□□□□□ -2.51
COL4A3Q01955 RNU6-1326P-201ENST00000391262 107 ntBASIC-0.62□□□□□ -2.51
COL4A3Q01955 uc_338.19-201ENST00000616808 99 ntBASIC-0.63□□□□□ -2.51
COL4A3Q01955 SNORD18C-201ENST00000362704 69 ntBASIC-0.64□□□□□ -2.51
COL4A3Q01955 RNU6-59P-201ENST00000384787 107 ntBASIC-0.64□□□□□ -2.51
COL4A3Q01955 RNU6-576P-201ENST00000390854 102 ntBASIC-0.64□□□□□ -2.51
COL4A3Q01955 RNU6-226P-201ENST00000363778 107 ntBASIC-0.65□□□□□ -2.51
COL4A3Q01955 Y_RNA.129-201ENST00000363392 110 ntBASIC-0.65□□□□□ -2.51
COL4A3Q01955 HLA-S-202ENST00000425174 53 ntBASIC-0.65□□□□□ -2.51
COL4A3Q01955 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-0.65□□□□□ -2.51
COL4A3Q01955 MIR379-201ENST00000362218 67 ntBASIC-0.66□□□□□ -2.52
COL4A3Q01955 Y_RNA.345-201ENST00000365384 92 ntBASIC-0.66□□□□□ -2.52
COL4A3Q01955 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.66□□□□□ -2.52
COL4A3Q01955 Y_RNA.53-201ENST00000362765 102 ntBASIC-0.68□□□□□ -2.52
COL4A3Q01955 RNU7-134P-201ENST00000458997 64 ntBASIC-0.68□□□□□ -2.52
COL4A3Q01955 Y_RNA.225-201ENST00000364326 97 ntBASIC-0.69□□□□□ -2.52
COL4A3Q01955 MIR8485-201ENST00000401372 91 ntBASIC-0.69□□□□□ -2.52
COL4A3Q01955 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-0.69□□□□□ -2.52
COL4A3Q01955 U6.103-201ENST00000637085 61 ntBASIC-0.72□□□□□ -2.52
COL4A3Q01955 RNU6-695P-201ENST00000391157 104 ntBASIC-0.72□□□□□ -2.53
COL4A3Q01955 SNORD54-201ENST00000459159 67 ntBASIC-0.72□□□□□ -2.53
COL4A3Q01955 MIR5591-201ENST00000578248 65 ntBASIC-0.72□□□□□ -2.53
COL4A3Q01955 Y_RNA.232-201ENST00000364369 96 ntBASIC-0.73□□□□□ -2.53
COL4A3Q01955 MIR4770-201ENST00000579149 58 ntBASIC-0.73□□□□□ -2.53
COL4A3Q01955 AC138207.3-201ENST00000585289 166 ntBASIC-0.73□□□□□ -2.53
COL4A3Q01955 MIR6874-201ENST00000635894 71 ntBASIC-0.73□□□□□ -2.53
COL4A3Q01955 RNU6-983P-201ENST00000516004 103 ntBASIC-0.75□□□□□ -2.53
COL4A3Q01955 RNU6-68P-201ENST00000516576 104 ntBASIC-0.75□□□□□ -2.53
COL4A3Q01955 Y_RNA.206-201ENST00000364136 102 ntBASIC-0.77□□□□□ -2.53
COL4A3Q01955 Y_RNA.382-201ENST00000365672 114 ntBASIC-0.78□□□□□ -2.53
COL4A3Q01955 RNU6-1121P-201ENST00000516802 109 ntBASIC-0.78□□□□□ -2.53
COL4A3Q01955 MIR6502-201ENST00000617296 76 ntBASIC-0.78□□□□□ -2.53
COL4A3Q01955 RNU6-912P-201ENST00000363800 104 ntBASIC-0.78□□□□□ -2.53
COL4A3Q01955 RNU6-400P-201ENST00000391173 106 ntBASIC-0.79□□□□□ -2.54
COL4A3Q01955 RNU6-118P-201ENST00000516552 102 ntBASIC-0.79□□□□□ -2.54
COL4A3Q01955 SNORD19B.1-201ENST00000630615 80 ntBASIC-0.79□□□□□ -2.54
COL4A3Q01955 MIR548AJ2-201ENST00000408539 92 ntBASIC-0.8□□□□□ -2.54
COL4A3Q01955 Y_RNA.320-201ENST00000365144 102 ntBASIC-0.81□□□□□ -2.54
COL4A3Q01955 MIR4520-1-201ENST00000582609 70 ntBASIC-0.81□□□□□ -2.54
COL4A3Q01955 RNU6-1034P-201ENST00000365335 101 ntBASIC-0.84□□□□□ -2.54
COL4A3Q01955 SNORD115.2-201ENST00000391126 59 ntBASIC-0.84□□□□□ -2.54
COL4A3Q01955 RNU6-724P-201ENST00000390958 105 ntBASIC-0.86□□□□□ -2.55
COL4A3Q01955 RNU6-1191P-201ENST00000516799 107 ntBASIC-0.87□□□□□ -2.55
COL4A3Q01955 Y_RNA.186-201ENST00000363899 92 ntBASIC-0.88□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 269.9 ms