Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 RNU6-563P-201ENST00000364872 108 ntBASIC-1.18□□□□□ -2.6
PMS2P54278 RNU6-530P-201ENST00000391180 107 ntBASIC-1.18□□□□□ -2.6
PMS2P54278 RNU6-226P-201ENST00000363778 107 ntBASIC-1.19□□□□□ -2.6
PMS2P54278 RNU6-400P-201ENST00000391173 106 ntBASIC-1.19□□□□□ -2.6
PMS2P54278 MIR5591-201ENST00000578248 65 ntBASIC-1.19□□□□□ -2.6
PMS2P54278 MIR365A-201ENST00000362260 87 ntBASIC-1.2□□□□□ -2.6
PMS2P54278 RNU4-33P-201ENST00000364316 85 ntBASIC-1.2□□□□□ -2.6
PMS2P54278 HLA-S-202ENST00000425174 53 ntBASIC-1.2□□□□□ -2.6
PMS2P54278 AC013734.1-201ENST00000619329 111 ntBASIC-1.2□□□□□ -2.6
PMS2P54278 SNORD60-201ENST00000383903 83 ntBASIC-1.21□□□□□ -2.6
PMS2P54278 AC138207.3-201ENST00000585289 166 ntBASIC-1.21□□□□□ -2.6
PMS2P54278 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.22□□□□□ -2.6
PMS2P54278 MIR487B-201ENST00000385021 84 ntBASIC-1.22□□□□□ -2.6
PMS2P54278 SNORA17.4-201ENST00000391287 132 ntBASIC-1.22□□□□□ -2.6
PMS2P54278 MIR548N-201ENST00000408742 75 ntBASIC-1.23□□□□□ -2.61
PMS2P54278 RNA5SP180-201ENST00000516181 101 ntBASIC-1.23□□□□□ -2.61
PMS2P54278 RNA5SP461-201ENST00000516451 104 ntBASIC-1.23□□□□□ -2.61
PMS2P54278 MIR202-201ENST00000362219 110 ntBASIC-1.24□□□□□ -2.61
PMS2P54278 RNA5SP86-201ENST00000390869 98 ntBASIC-1.24□□□□□ -2.61
PMS2P54278 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.26□□□□□ -2.61
PMS2P54278 MIR4441-201ENST00000582623 100 ntBASIC-1.26□□□□□ -2.61
PMS2P54278 MIR4426-201ENST00000640330 63 ntBASIC-1.27□□□□□ -2.61
PMS2P54278 RNU6-614P-201ENST00000384369 107 ntBASIC-1.28□□□□□ -2.61
PMS2P54278 MIR1285-2-201ENST00000408311 88 ntBASIC-1.28□□□□□ -2.61
PMS2P54278 RNU6-176P-201ENST00000517196 105 ntBASIC-1.28□□□□□ -2.61
PMS2P54278 MIR4770-201ENST00000579149 58 ntBASIC-1.28□□□□□ -2.61
PMS2P54278 U6.59-201ENST00000615686 107 ntBASIC-1.28□□□□□ -2.61
PMS2P54278 SNORD18C-201ENST00000362704 69 ntBASIC-1.3□□□□□ -2.62
PMS2P54278 RNU6-742P-201ENST00000365289 107 ntBASIC-1.3□□□□□ -2.62
PMS2P54278 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.32□□□□□ -2.62
PMS2P54278 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.32□□□□□ -2.62
PMS2P54278 MIR581-201ENST00000384895 96 ntBASIC-1.32□□□□□ -2.62
PMS2P54278 RNU6-695P-201ENST00000391157 104 ntBASIC-1.32□□□□□ -2.62
PMS2P54278 MIR548H1-201ENST00000408610 102 ntBASIC-1.32□□□□□ -2.62
PMS2P54278 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.32□□□□□ -2.62
PMS2P54278 U6.97-201ENST00000636904 101 ntBASIC-1.33□□□□□ -2.62
PMS2P54278 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.34□□□□□ -2.62
PMS2P54278 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.35□□□□□ -2.63
PMS2P54278 RNU6-300P-201ENST00000459080 104 ntBASIC-1.35□□□□□ -2.63
PMS2P54278 RNY4P27-201ENST00000363341 96 ntBASIC-1.36□□□□□ -2.63
PMS2P54278 RNU6-936P-201ENST00000384005 107 ntBASIC-1.36□□□□□ -2.63
PMS2P54278 MIR548AL-201ENST00000578416 97 ntBASIC-1.36□□□□□ -2.63
PMS2P54278 MIR3123-201ENST00000583417 75 ntBASIC-1.36□□□□□ -2.63
PMS2P54278 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.37□□□□□ -2.63
PMS2P54278 RNU6-808P-201ENST00000391233 108 ntBASIC-1.37□□□□□ -2.63
PMS2P54278 RNU6-838P-201ENST00000363399 108 ntBASIC-1.39□□□□□ -2.63
PMS2P54278 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.39□□□□□ -2.63
PMS2P54278 Y_RNA.379-201ENST00000365653 102 ntBASIC-1.39□□□□□ -2.63
PMS2P54278 MTND4LP19-201ENST00000403051 166 ntBASIC-1.39□□□□□ -2.63
PMS2P54278 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.39□□□□□ -2.63
PMS2P54278 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.4□□□□□ -2.63
PMS2P54278 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.41□□□□□ -2.64
PMS2P54278 MIR379-201ENST00000362218 67 ntBASIC-1.42□□□□□ -2.64
PMS2P54278 SNORD18.1-201ENST00000363807 70 ntBASIC-1.42□□□□□ -2.64
PMS2P54278 RNU6-753P-201ENST00000363926 107 ntBASIC-1.42□□□□□ -2.64
PMS2P54278 AC108019.1-201ENST00000512540 175 ntBASIC-1.42□□□□□ -2.64
PMS2P54278 MIR4756-201ENST00000577874 78 ntBASIC-1.42□□□□□ -2.64
PMS2P54278 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.43□□□□□ -2.64
PMS2P54278 RNU6-68P-201ENST00000516576 104 ntBASIC-1.43□□□□□ -2.64
PMS2P54278 MIR548AM-201ENST00000584298 74 ntBASIC-1.44□□□□□ -2.64
PMS2P54278 RNU6-841P-201ENST00000383872 107 ntBASIC-1.45□□□□□ -2.64
PMS2P54278 MIR548W-201ENST00000581970 74 ntBASIC-1.46□□□□□ -2.64
PMS2P54278 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.46□□□□□ -2.64
PMS2P54278 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.48□□□□□ -2.65
PMS2P54278 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.48□□□□□ -2.65
PMS2P54278 MIR548H4-201ENST00000408689 111 ntBASIC-1.48□□□□□ -2.65
PMS2P54278 snoU13.10-201ENST00000459301 103 ntBASIC-1.48□□□□□ -2.65
PMS2P54278 MIR1246-201ENST00000636535 73 ntBASIC-1.48□□□□□ -2.65
PMS2P54278 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.49□□□□□ -2.65
PMS2P54278 RNU4-88P-201ENST00000411220 86 ntBASIC-1.49□□□□□ -2.65
PMS2P54278 RNU6-1204P-201ENST00000363948 107 ntBASIC-1.5□□□□□ -2.65
PMS2P54278 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.51□□□□□ -2.65
PMS2P54278 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.51□□□□□ -2.65
PMS2P54278 MIR4317-201ENST00000637586 65 ntBASIC-1.51□□□□□ -2.65
PMS2P54278 RNU6-930P-201ENST00000390938 100 ntBASIC-1.53□□□□□ -2.65
PMS2P54278 MIR548F3-201ENST00000408509 87 ntBASIC-1.53□□□□□ -2.65
PMS2P54278 RNU6-983P-201ENST00000516004 103 ntBASIC-1.53□□□□□ -2.65
PMS2P54278 MIR664B-201ENST00000626756 61 ntBASIC-1.55□□□□□ -2.66
PMS2P54278 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.56□□□□□ -2.66
PMS2P54278 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.57□□□□□ -2.66
PMS2P54278 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.58□□□□□ -2.66
PMS2P54278 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.58□□□□□ -2.66
PMS2P54278 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.59□□□□□ -2.66
PMS2P54278 RNU6-987P-201ENST00000384759 104 ntBASIC-1.59□□□□□ -2.66
PMS2P54278 RNU4-37P-201ENST00000410214 84 ntBASIC-1.59□□□□□ -2.66
PMS2P54278 RNU6-912P-201ENST00000363800 104 ntBASIC-1.61□□□□□ -2.67
PMS2P54278 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.61□□□□□ -2.67
PMS2P54278 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.61□□□□□ -2.67
PMS2P54278 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.61□□□□□ -2.67
PMS2P54278 RNU6-141P-201ENST00000410499 105 ntBASIC-1.61□□□□□ -2.67
PMS2P54278 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.63□□□□□ -2.67
PMS2P54278 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.63□□□□□ -2.67
PMS2P54278 DLEU2_4.2-201ENST00000616613 58 ntBASIC-1.63□□□□□ -2.67
PMS2P54278 RNU6-1326P-201ENST00000391262 107 ntBASIC-1.64□□□□□ -2.67
PMS2P54278 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.65□□□□□ -2.67
PMS2P54278 SNORD113-3-201ENST00000364830 72 ntBASIC-1.65□□□□□ -2.67
PMS2P54278 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.65□□□□□ -2.67
PMS2P54278 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.65□□□□□ -2.67
PMS2P54278 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.66□□□□□ -2.68
PMS2P54278 RNA5SP405-201ENST00000363059 114 ntBASIC-1.67□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 365.5 ms