Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 RNU6-758P-201ENST00000516292 89 ntBASIC-2.43□□□□□ -2.8
PCP4P48539 SNORD95.1-201ENST00000364099 68 ntBASIC-2.44□□□□□ -2.8
PCP4P48539 AC097484.2-201ENST00000509147 251 ntBASIC-2.44□□□□□ -2.8
PCP4P48539 RNU6-1204P-201ENST00000363948 107 ntBASIC-2.45□□□□□ -2.8
PCP4P48539 SNORD113-3-201ENST00000364830 72 ntBASIC-2.47□□□□□ -2.8
PCP4P48539 RNA5SP368-201ENST00000364298 116 ntBASIC-2.48□□□□□ -2.81
PCP4P48539 MIR634-201ENST00000385208 97 ntBASIC-2.48□□□□□ -2.81
PCP4P48539 MIR548AX-201ENST00000580117 73 ntBASIC-2.48□□□□□ -2.81
PCP4P48539 Y_RNA.232-201ENST00000364369 96 ntBASIC-2.49□□□□□ -2.81
PCP4P48539 Y_RNA.382-201ENST00000365672 114 ntBASIC-2.49□□□□□ -2.81
PCP4P48539 RNU6-1008P-201ENST00000384160 104 ntBASIC-2.5□□□□□ -2.81
PCP4P48539 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.5□□□□□ -2.81
PCP4P48539 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.5□□□□□ -2.81
PCP4P48539 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.5□□□□□ -2.81
PCP4P48539 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.5□□□□□ -2.81
PCP4P48539 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.5□□□□□ -2.81
PCP4P48539 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.5□□□□□ -2.81
PCP4P48539 Y_RNA.164-201ENST00000363709 102 ntBASIC-2.51□□□□□ -2.81
PCP4P48539 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-2.51□□□□□ -2.81
PCP4P48539 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-2.51□□□□□ -2.81
PCP4P48539 RNU6-822P-201ENST00000362707 106 ntBASIC-2.52□□□□□ -2.81
PCP4P48539 RNU6-808P-201ENST00000391233 108 ntBASIC-2.52□□□□□ -2.81
PCP4P48539 Y_RNA.610-201ENST00000410681 103 ntBASIC-2.52□□□□□ -2.81
PCP4P48539 MIR1254-1-201ENST00000408257 97 ntBASIC-2.53□□□□□ -2.81
PCP4P48539 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.53□□□□□ -2.81
PCP4P48539 MIR664B-201ENST00000626756 61 ntBASIC-2.54□□□□□ -2.82
PCP4P48539 Y_RNA.434-201ENST00000384090 100 ntBASIC-2.55□□□□□ -2.82
PCP4P48539 RNU6-1326P-201ENST00000391262 107 ntBASIC-2.55□□□□□ -2.82
PCP4P48539 MTND4LP19-201ENST00000403051 166 ntBASIC-2.55□□□□□ -2.82
PCP4P48539 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.55□□□□□ -2.82
PCP4P48539 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.56□□□□□ -2.82
PCP4P48539 RNU6-1169P-201ENST00000363537 103 ntBASIC-2.57□□□□□ -2.82
PCP4P48539 MIR499A-201ENST00000384903 122 ntBASIC-2.57□□□□□ -2.82
PCP4P48539 RNU6-930P-201ENST00000390938 100 ntBASIC-2.57□□□□□ -2.82
PCP4P48539 Y_RNA.115-201ENST00000363272 98 ntBASIC-2.58□□□□□ -2.82
PCP4P48539 MIR489-201ENST00000384923 84 ntBASIC-2.58□□□□□ -2.82
PCP4P48539 SNORA11-201ENST00000408789 128 ntBASIC-2.58□□□□□ -2.82
PCP4P48539 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.58□□□□□ -2.82
PCP4P48539 RNU6-983P-201ENST00000516004 103 ntBASIC-2.59□□□□□ -2.82
PCP4P48539 FTX_4.1-201ENST00000616291 147 ntBASIC-2.6□□□□□ -2.83
PCP4P48539 RNU6-345P-201ENST00000517001 107 ntBASIC-2.61□□□□□ -2.83
PCP4P48539 MIR4443-201ENST00000585052 53 ntBASIC-2.61□□□□□ -2.83
PCP4P48539 RNU6-986P-201ENST00000363133 102 ntBASIC-2.62□□□□□ -2.83
PCP4P48539 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.62□□□□□ -2.83
PCP4P48539 Y_RNA.345-201ENST00000365384 92 ntBASIC-2.62□□□□□ -2.83
PCP4P48539 Y_RNA.442-201ENST00000384131 102 ntBASIC-2.63□□□□□ -2.83
PCP4P48539 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.63□□□□□ -2.83
PCP4P48539 MIR548F3-201ENST00000408509 87 ntBASIC-2.63□□□□□ -2.83
PCP4P48539 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.63□□□□□ -2.83
PCP4P48539 MIR1246-201ENST00000636535 73 ntBASIC-2.63□□□□□ -2.83
PCP4P48539 RNU6-118P-201ENST00000516552 102 ntBASIC-2.65□□□□□ -2.83
PCP4P48539 SNORD115.2-201ENST00000391126 59 ntBASIC-2.66□□□□□ -2.84
PCP4P48539 MIRLET7A2-201ENST00000362105 72 ntBASIC-2.67□□□□□ -2.84
PCP4P48539 RNA5SP461-201ENST00000516451 104 ntBASIC-2.67□□□□□ -2.84
PCP4P48539 Y_RNA.206-201ENST00000364136 102 ntBASIC-2.68□□□□□ -2.84
PCP4P48539 Y_RNA.134-201ENST00000363435 105 ntBASIC-2.7□□□□□ -2.84
PCP4P48539 MIR4748-201ENST00000578076 82 ntBASIC-2.7□□□□□ -2.84
PCP4P48539 RNU6-194P-201ENST00000363862 105 ntBASIC-2.73□□□□□ -2.85
PCP4P48539 RNA5SP224-201ENST00000365069 126 ntBASIC-2.75□□□□□ -2.85
PCP4P48539 MIR4636-201ENST00000582271 80 ntBASIC-2.75□□□□□ -2.85
PCP4P48539 Y_RNA.260-201ENST00000364628 101 ntBASIC-2.76□□□□□ -2.85
PCP4P48539 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.76□□□□□ -2.85
PCP4P48539 RNU6-59P-201ENST00000384787 107 ntBASIC-2.76□□□□□ -2.85
PCP4P48539 RNA5SP405-201ENST00000363059 114 ntBASIC-2.77□□□□□ -2.85
PCP4P48539 MIR545-201ENST00000385085 106 ntBASIC-2.77□□□□□ -2.85
PCP4P48539 Y_RNA.583-201ENST00000391033 113 ntBASIC-2.77□□□□□ -2.85
PCP4P48539 AL603825.1-201ENST00000438481 80 ntBASIC-2.77□□□□□ -2.85
PCP4P48539 RNU6-836P-201ENST00000362920 107 ntBASIC-2.78□□□□□ -2.85
PCP4P48539 DLEU2_4.2-201ENST00000616613 58 ntBASIC-2.78□□□□□ -2.85
PCP4P48539 AL355480.1-201ENST00000629041 99 ntBASIC-2.78□□□□□ -2.85
PCP4P48539 RNU6-141P-201ENST00000410499 105 ntBASIC-2.82□□□□□ -2.86
PCP4P48539 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.83□□□□□ -2.86
PCP4P48539 RNA5SP180-201ENST00000516181 101 ntBASIC-2.83□□□□□ -2.86
PCP4P48539 RNA5SP67-201ENST00000516422 131 ntBASIC-2.83□□□□□ -2.86
PCP4P48539 SNORD45C-201ENST00000383893 79 ntBASIC-2.84□□□□□ -2.86
PCP4P48539 MIR4769-201ENST00000584126 77 ntBASIC-2.84□□□□□ -2.86
PCP4P48539 Y_RNA.63-201ENST00000362841 102 ntBASIC-2.85□□□□□ -2.87
PCP4P48539 Y_RNA.543-201ENST00000384649 107 ntBASIC-2.85□□□□□ -2.87
PCP4P48539 MIR4320-201ENST00000636981 65 ntBASIC-2.85□□□□□ -2.87
PCP4P48539 RNA5SP257-201ENST00000363023 116 ntBASIC-2.86□□□□□ -2.87
PCP4P48539 MIR656-201ENST00000385224 78 ntBASIC-2.87□□□□□ -2.87
PCP4P48539 RNA5SP457-201ENST00000363657 124 ntBASIC-2.88□□□□□ -2.87
PCP4P48539 Y_RNA.514-201ENST00000384528 112 ntBASIC-2.88□□□□□ -2.87
PCP4P48539 RNY4P9-201ENST00000363194 97 ntBASIC-2.89□□□□□ -2.87
PCP4P48539 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-2.93□□□□□ -2.88
PCP4P48539 Y_RNA.335-201ENST00000365299 96 ntBASIC-2.94□□□□□ -2.88
PCP4P48539 RNU4-37P-201ENST00000410214 84 ntBASIC-2.95□□□□□ -2.88
PCP4P48539 RNA5SP25-201ENST00000410815 110 ntBASIC-2.95□□□□□ -2.88
PCP4P48539 SNORD114-15-201ENST00000364687 72 ntBASIC-2.96□□□□□ -2.88
PCP4P48539 Y_RNA.519-201ENST00000384553 102 ntBASIC-2.97□□□□□ -2.88
PCP4P48539 RNU6-987P-201ENST00000384759 104 ntBASIC-2.97□□□□□ -2.88
PCP4P48539 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.97□□□□□ -2.88
PCP4P48539 RNU6-1340P-201ENST00000384438 107 ntBASIC-3□□□□□ -2.89
PCP4P48539 MIR1285-2-201ENST00000408311 88 ntBASIC-3.01□□□□□ -2.89
PCP4P48539 SNX3P1Y-201ENST00000615757 176 ntBASIC-3.03□□□□□ -2.89
PCP4P48539 Y_RNA.181-201ENST00000363872 101 ntBASIC-3.04□□□□□ -2.9
PCP4P48539 Y_RNA.225-201ENST00000364326 97 ntBASIC-3.05□□□□□ -2.9
PCP4P48539 MIR3139-201ENST00000579145 76 ntBASIC-3.06□□□□□ -2.9
PCP4P48539 TARS-215ENST00000626210 201 ntTSL 5 BASIC-3.08□□□□□ -2.9
PCP4P48539 AL731768.1-201ENST00000603124 139 ntBASIC-3.1□□□□□ -2.91
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms