Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 Y_RNA.475-201ENST00000384345 101 ntBASIC-0.34□□□□□ -2.46
KRT9P35527 RNU6-706P-201ENST00000517229 104 ntBASIC-0.34□□□□□ -2.46
KRT9P35527 RNU6-79P-201ENST00000362511 107 ntBASIC-0.35□□□□□ -2.47
KRT9P35527 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.35□□□□□ -2.47
KRT9P35527 RNU6-808P-201ENST00000391233 108 ntBASIC-0.35□□□□□ -2.47
KRT9P35527 Y_RNA.722-201ENST00000517279 114 ntBASIC-0.35□□□□□ -2.47
KRT9P35527 MIR23C-201ENST00000579846 100 ntBASIC-0.35□□□□□ -2.47
KRT9P35527 MIR6502-201ENST00000617296 76 ntBASIC-0.35□□□□□ -2.47
KRT9P35527 SNORA27.2-201ENST00000363365 126 ntBASIC-0.36□□□□□ -2.47
KRT9P35527 RNU6-226P-201ENST00000363778 107 ntBASIC-0.36□□□□□ -2.47
KRT9P35527 RNY4P7-201ENST00000364600 96 ntBASIC-0.36□□□□□ -2.47
KRT9P35527 MIR496-201ENST00000385226 102 ntBASIC-0.36□□□□□ -2.47
KRT9P35527 RNU6-258P-201ENST00000390884 101 ntBASIC-0.36□□□□□ -2.47
KRT9P35527 RNU6-400P-201ENST00000391173 106 ntBASIC-0.36□□□□□ -2.47
KRT9P35527 HLA-S-202ENST00000425174 53 ntBASIC-0.36□□□□□ -2.47
KRT9P35527 AC120024.2-201ENST00000576526 175 ntBASIC-0.36□□□□□ -2.47
KRT9P35527 MIR5591-201ENST00000578248 65 ntBASIC-0.36□□□□□ -2.47
KRT9P35527 MIR4770-201ENST00000579149 58 ntBASIC-0.36□□□□□ -2.47
KRT9P35527 MIR4520-1-201ENST00000582609 70 ntBASIC-0.36□□□□□ -2.47
KRT9P35527 MTRNR2L9-201ENST00000622562 75 ntBASIC-0.36□□□□□ -2.47
KRT9P35527 Y_RNA.232-201ENST00000364369 96 ntBASIC-0.37□□□□□ -2.47
KRT9P35527 RNU6-119P-201ENST00000364882 107 ntBASIC-0.37□□□□□ -2.47
KRT9P35527 Y_RNA.403-201ENST00000383977 101 ntBASIC-0.37□□□□□ -2.47
KRT9P35527 RNU6-936P-201ENST00000384005 107 ntBASIC-0.37□□□□□ -2.47
KRT9P35527 RNU6-974P-201ENST00000384099 108 ntBASIC-0.37□□□□□ -2.47
KRT9P35527 AL451105.1-201ENST00000450005 189 ntBASIC-0.37□□□□□ -2.47
KRT9P35527 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-0.37□□□□□ -2.47
KRT9P35527 Y_RNA.204-201ENST00000364112 102 ntBASIC-0.38□□□□□ -2.47
KRT9P35527 RNU4-33P-201ENST00000364316 85 ntBASIC-0.38□□□□□ -2.47
KRT9P35527 RNU6-563P-201ENST00000364872 108 ntBASIC-0.38□□□□□ -2.47
KRT9P35527 Y_RNA.543-201ENST00000384649 107 ntBASIC-0.38□□□□□ -2.47
KRT9P35527 RNU4-37P-201ENST00000410214 84 ntBASIC-0.38□□□□□ -2.47
KRT9P35527 RNU6-1247P-201ENST00000516622 98 ntBASIC-0.38□□□□□ -2.47
KRT9P35527 Y_RNA.781-201ENST00000620301 103 ntBASIC-0.38□□□□□ -2.47
KRT9P35527 Y_RNA.175-201ENST00000363794 111 ntBASIC-0.39□□□□□ -2.47
KRT9P35527 RNU6-987P-201ENST00000384759 104 ntBASIC-0.39□□□□□ -2.47
KRT9P35527 RNA5SP86-201ENST00000390869 98 ntBASIC-0.39□□□□□ -2.47
KRT9P35527 RNU6-695P-201ENST00000391157 104 ntBASIC-0.39□□□□□ -2.47
KRT9P35527 Y_RNA.103-201ENST00000363171 102 ntBASIC-0.4□□□□□ -2.47
KRT9P35527 MIR548H1-201ENST00000408610 102 ntBASIC-0.4□□□□□ -2.47
KRT9P35527 RNY3P8-201ENST00000411366 126 ntBASIC-0.4□□□□□ -2.47
KRT9P35527 Y_RNA.678-201ENST00000516408 96 ntBASIC-0.4□□□□□ -2.47
KRT9P35527 AC013734.1-201ENST00000619329 111 ntBASIC-0.4□□□□□ -2.47
KRT9P35527 RNU6-983P-201ENST00000516004 103 ntBASIC-0.41□□□□□ -2.48
KRT9P35527 RNU6-980P-201ENST00000516925 103 ntBASIC-0.41□□□□□ -2.48
KRT9P35527 MIR3123-201ENST00000583417 75 ntBASIC-0.41□□□□□ -2.48
KRT9P35527 U6.97-201ENST00000636904 101 ntBASIC-0.41□□□□□ -2.48
KRT9P35527 Y_RNA.225-201ENST00000364326 97 ntBASIC-0.42□□□□□ -2.48
KRT9P35527 RNU6-1034P-201ENST00000365335 101 ntBASIC-0.42□□□□□ -2.48
KRT9P35527 RNU6-841P-201ENST00000383872 107 ntBASIC-0.42□□□□□ -2.48
KRT9P35527 Y_RNA.449-201ENST00000384187 102 ntBASIC-0.42□□□□□ -2.48
KRT9P35527 MIR487B-201ENST00000385021 84 ntBASIC-0.42□□□□□ -2.48
KRT9P35527 SNORD19B.1-201ENST00000630615 80 ntBASIC-0.42□□□□□ -2.48
KRT9P35527 RNA5SP93-201ENST00000362525 114 ntBASIC-0.43□□□□□ -2.48
KRT9P35527 SNORD18C-201ENST00000362704 69 ntBASIC-0.43□□□□□ -2.48
KRT9P35527 Y_RNA.223-201ENST00000364290 113 ntBASIC-0.43□□□□□ -2.48
KRT9P35527 Y_RNA.379-201ENST00000365653 102 ntBASIC-0.43□□□□□ -2.48
KRT9P35527 RNU6-530P-201ENST00000391180 107 ntBASIC-0.43□□□□□ -2.48
KRT9P35527 MIR548N-201ENST00000408742 75 ntBASIC-0.43□□□□□ -2.48
KRT9P35527 RNU6-141P-201ENST00000410499 105 ntBASIC-0.43□□□□□ -2.48
KRT9P35527 SNORD54-201ENST00000459159 67 ntBASIC-0.43□□□□□ -2.48
KRT9P35527 RNY4-201ENST00000516507 96 ntBASIC-0.43□□□□□ -2.48
KRT9P35527 MIR548AM-201ENST00000584298 74 ntBASIC-0.43□□□□□ -2.48
KRT9P35527 MIR202-201ENST00000362219 110 ntBASIC-0.44□□□□□ -2.48
KRT9P35527 SNORD18.1-201ENST00000363807 70 ntBASIC-0.44□□□□□ -2.48
KRT9P35527 RNU6-753P-201ENST00000363926 107 ntBASIC-0.44□□□□□ -2.48
KRT9P35527 RNU6-361P-201ENST00000364454 107 ntBASIC-0.44□□□□□ -2.48
KRT9P35527 SNORD60-201ENST00000383903 83 ntBASIC-0.44□□□□□ -2.48
KRT9P35527 MIR581-201ENST00000384895 96 ntBASIC-0.44□□□□□ -2.48
KRT9P35527 SNORA17.4-201ENST00000391287 132 ntBASIC-0.44□□□□□ -2.48
KRT9P35527 Y_RNA.53-201ENST00000362765 102 ntBASIC-0.45□□□□□ -2.48
KRT9P35527 Y_RNA.421-201ENST00000384052 101 ntBASIC-0.45□□□□□ -2.48
KRT9P35527 Y_RNA.502-201ENST00000384478 113 ntBASIC-0.45□□□□□ -2.48
KRT9P35527 AC108019.1-201ENST00000512540 175 ntBASIC-0.45□□□□□ -2.48
KRT9P35527 RNU6-118P-201ENST00000516552 102 ntBASIC-0.45□□□□□ -2.48
KRT9P35527 RNU4-88P-201ENST00000411220 86 ntBASIC-0.46□□□□□ -2.48
KRT9P35527 snoU13.10-201ENST00000459301 103 ntBASIC-0.46□□□□□ -2.48
KRT9P35527 MIR4756-201ENST00000577874 78 ntBASIC-0.46□□□□□ -2.48
KRT9P35527 MIR548W-201ENST00000581970 74 ntBASIC-0.46□□□□□ -2.48
KRT9P35527 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-0.46□□□□□ -2.48
KRT9P35527 MIR4426-201ENST00000640330 63 ntBASIC-0.46□□□□□ -2.48
KRT9P35527 MIR664B-201ENST00000626756 61 ntBASIC-0.47□□□□□ -2.48
KRT9P35527 MIR379-201ENST00000362218 67 ntBASIC-0.48□□□□□ -2.49
KRT9P35527 Y_RNA.349-201ENST00000365406 102 ntBASIC-0.48□□□□□ -2.49
KRT9P35527 Y_RNA.591-201ENST00000410228 104 ntBASIC-0.48□□□□□ -2.49
KRT9P35527 RNU6-300P-201ENST00000459080 104 ntBASIC-0.48□□□□□ -2.49
KRT9P35527 RNU6-68P-201ENST00000516576 104 ntBASIC-0.48□□□□□ -2.49
KRT9P35527 RNU6-176P-201ENST00000517196 105 ntBASIC-0.48□□□□□ -2.49
KRT9P35527 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-0.48□□□□□ -2.49
KRT9P35527 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-0.48□□□□□ -2.49
KRT9P35527 Y_RNA.129-201ENST00000363392 110 ntBASIC-0.49□□□□□ -2.49
KRT9P35527 RNU6-1047P-201ENST00000364418 107 ntBASIC-0.49□□□□□ -2.49
KRT9P35527 Y_RNA.284-201ENST00000364806 102 ntBASIC-0.49□□□□□ -2.49
KRT9P35527 RNU6-742P-201ENST00000365289 107 ntBASIC-0.49□□□□□ -2.49
KRT9P35527 AC097484.2-201ENST00000509147 251 ntBASIC-0.49□□□□□ -2.49
KRT9P35527 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-0.49□□□□□ -2.49
KRT9P35527 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-0.49□□□□□ -2.49
KRT9P35527 RNU6-912P-201ENST00000363800 104 ntBASIC-0.5□□□□□ -2.49
KRT9P35527 RNU6-1324P-201ENST00000384222 107 ntBASIC-0.5□□□□□ -2.49
KRT9P35527 MIR548AJ2-201ENST00000408539 92 ntBASIC-0.5□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms