Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 SNORD14C-201ENST00000365382 88 ntBASIC-0.21□□□□□ -2.44
COL3A1P02461 RNU6-59P-201ENST00000384787 107 ntBASIC-0.21□□□□□ -2.44
COL3A1P02461 U6.103-201ENST00000637085 61 ntBASIC-0.21□□□□□ -2.44
COL3A1P02461 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.22□□□□□ -2.44
COL3A1P02461 Y_RNA.475-201ENST00000384345 101 ntBASIC-0.22□□□□□ -2.44
COL3A1P02461 SNORD114-14-201ENST00000362723 75 ntBASIC-0.22□□□□□ -2.45
COL3A1P02461 SNORA3B-201ENST00000391305 131 ntBASIC-0.22□□□□□ -2.45
COL3A1P02461 MIR548N-201ENST00000408742 75 ntBASIC-0.22□□□□□ -2.45
COL3A1P02461 RNA5SP26-201ENST00000362406 119 ntBASIC-0.23□□□□□ -2.45
COL3A1P02461 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.23□□□□□ -2.45
COL3A1P02461 MIR4324-201ENST00000584846 72 ntBASIC-0.23□□□□□ -2.45
COL3A1P02461 Y_RNA.345-201ENST00000365384 92 ntBASIC-0.24□□□□□ -2.45
COL3A1P02461 MIR147A-201ENST00000385079 72 ntBASIC-0.24□□□□□ -2.45
COL3A1P02461 SNORD126-201ENST00000459475 77 ntBASIC-0.24□□□□□ -2.45
COL3A1P02461 MIR196A2-201ENST00000385189 110 ntBASIC-0.25□□□□□ -2.45
COL3A1P02461 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.25□□□□□ -2.45
COL3A1P02461 AC120024.2-201ENST00000576526 175 ntBASIC-0.25□□□□□ -2.45
COL3A1P02461 RNU6-284P-201ENST00000411105 106 ntBASIC-0.26□□□□□ -2.45
COL3A1P02461 RNA5SP180-201ENST00000516181 101 ntBASIC-0.26□□□□□ -2.45
COL3A1P02461 AC013734.1-201ENST00000619329 111 ntBASIC-0.26□□□□□ -2.45
COL3A1P02461 RNU6-431P-201ENST00000383874 107 ntBASIC-0.27□□□□□ -2.45
COL3A1P02461 Y_RNA.403-201ENST00000383977 101 ntBASIC-0.27□□□□□ -2.45
COL3A1P02461 Y_RNA.781-201ENST00000620301 103 ntBASIC-0.27□□□□□ -2.45
COL3A1P02461 SNORD64-201ENST00000386683 67 ntBASIC-0.28□□□□□ -2.45
COL3A1P02461 AC018880.2-201ENST00000414265 201 ntBASIC-0.28□□□□□ -2.45
COL3A1P02461 Y_RNA.129-201ENST00000363392 110 ntBASIC-0.29□□□□□ -2.46
COL3A1P02461 RNU6-724P-201ENST00000390958 105 ntBASIC-0.29□□□□□ -2.46
COL3A1P02461 MIR4436A-201ENST00000585278 85 ntBASIC-0.29□□□□□ -2.46
COL3A1P02461 U6.97-201ENST00000636904 101 ntBASIC-0.29□□□□□ -2.46
COL3A1P02461 snoU83B.1-201ENST00000517136 88 ntBASIC-0.3□□□□□ -2.46
COL3A1P02461 MIR379-201ENST00000362218 67 ntBASIC-0.32□□□□□ -2.46
COL3A1P02461 SNORD18C-201ENST00000362704 69 ntBASIC-0.32□□□□□ -2.46
COL3A1P02461 Y_RNA.223-201ENST00000364290 113 ntBASIC-0.32□□□□□ -2.46
COL3A1P02461 RNU6ATAC14P-201ENST00000516218 91 ntBASIC-0.32□□□□□ -2.46
COL3A1P02461 MIR6818-201ENST00000621576 65 ntBASIC-0.32□□□□□ -2.46
COL3A1P02461 RNU6-563P-201ENST00000364872 108 ntBASIC-0.33□□□□□ -2.46
COL3A1P02461 SCARNA17-201ENST00000516183 144 ntBASIC-0.33□□□□□ -2.46
COL3A1P02461 RNU6-164P-201ENST00000364604 103 ntBASIC-0.34□□□□□ -2.46
COL3A1P02461 MIR581-201ENST00000384895 96 ntBASIC-0.34□□□□□ -2.46
COL3A1P02461 RNY4-201ENST00000516507 96 ntBASIC-0.34□□□□□ -2.46
COL3A1P02461 MIR382-201ENST00000637119 76 ntBASIC-0.34□□□□□ -2.46
COL3A1P02461 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.34□□□□□ -2.46
COL3A1P02461 SNORD114-25-201ENST00000363742 72 ntBASIC-0.35□□□□□ -2.46
COL3A1P02461 Y_RNA.206-201ENST00000364136 102 ntBASIC-0.35□□□□□ -2.46
COL3A1P02461 MIR3115-201ENST00000577915 68 ntBASIC-0.35□□□□□ -2.46
COL3A1P02461 MIR3165-201ENST00000579874 75 ntBASIC-0.35□□□□□ -2.47
COL3A1P02461 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.35□□□□□ -2.47
COL3A1P02461 RNU6-119P-201ENST00000364882 107 ntBASIC-0.36□□□□□ -2.47
COL3A1P02461 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-0.36□□□□□ -2.47
COL3A1P02461 RNU6-79P-201ENST00000362511 107 ntBASIC-0.37□□□□□ -2.47
COL3A1P02461 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.37□□□□□ -2.47
COL3A1P02461 Y_RNA.382-201ENST00000365672 114 ntBASIC-0.4□□□□□ -2.47
COL3A1P02461 RNU6-576P-201ENST00000390854 102 ntBASIC-0.4□□□□□ -2.47
COL3A1P02461 RNU6-695P-201ENST00000391157 104 ntBASIC-0.41□□□□□ -2.47
COL3A1P02461 RNU6-68P-201ENST00000516576 104 ntBASIC-0.42□□□□□ -2.48
COL3A1P02461 MIR196A1-201ENST00000388006 70 ntBASIC-0.43□□□□□ -2.48
COL3A1P02461 SNORD115.2-201ENST00000391126 59 ntBASIC-0.43□□□□□ -2.48
COL3A1P02461 MIR1246-201ENST00000636535 73 ntBASIC-0.43□□□□□ -2.48
COL3A1P02461 Y_RNA.320-201ENST00000365144 102 ntBASIC-0.44□□□□□ -2.48
COL3A1P02461 MIR496-201ENST00000385226 102 ntBASIC-0.44□□□□□ -2.48
COL3A1P02461 MIR548AJ2-201ENST00000408539 92 ntBASIC-0.46□□□□□ -2.48
COL3A1P02461 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.47□□□□□ -2.48
COL3A1P02461 RNU6-1247P-201ENST00000516622 98 ntBASIC-0.47□□□□□ -2.48
COL3A1P02461 Y_RNA.134-201ENST00000363435 105 ntBASIC-0.48□□□□□ -2.49
COL3A1P02461 RNU6-912P-201ENST00000363800 104 ntBASIC-0.48□□□□□ -2.49
COL3A1P02461 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.48□□□□□ -2.49
COL3A1P02461 SNORD83B-201ENST00000386745 93 ntBASIC-0.48□□□□□ -2.49
COL3A1P02461 AC091912.2-201ENST00000624798 167 ntBASIC-0.48□□□□□ -2.49
COL3A1P02461 SNORD19B.1-201ENST00000630615 80 ntBASIC-0.48□□□□□ -2.49
COL3A1P02461 RNU6-400P-201ENST00000391173 106 ntBASIC-0.49□□□□□ -2.49
COL3A1P02461 AL500527.2-201ENST00000454105 95 ntBASIC-0.49□□□□□ -2.49
COL3A1P02461 RNU6-836P-201ENST00000362920 107 ntBASIC-0.5□□□□□ -2.49
COL3A1P02461 Y_RNA.421-201ENST00000384052 101 ntBASIC-0.5□□□□□ -2.49
COL3A1P02461 RNU7-134P-201ENST00000458997 64 ntBASIC-0.5□□□□□ -2.49
COL3A1P02461 MIR6874-201ENST00000635894 71 ntBASIC-0.5□□□□□ -2.49
COL3A1P02461 RNA5SP93-201ENST00000362525 114 ntBASIC-0.51□□□□□ -2.49
COL3A1P02461 RNU6-1034P-201ENST00000365335 101 ntBASIC-0.51□□□□□ -2.49
COL3A1P02461 AC138207.3-201ENST00000585289 166 ntBASIC-0.53□□□□□ -2.49
COL3A1P02461 SNORD111B-201ENST00000408587 80 ntBASIC-0.54□□□□□ -2.5
COL3A1P02461 RNU6-133P-201ENST00000383989 107 ntBASIC-0.54□□□□□ -2.5
COL3A1P02461 Y_RNA.543-201ENST00000384649 107 ntBASIC-0.54□□□□□ -2.5
COL3A1P02461 Y_RNA.53-201ENST00000362765 102 ntBASIC-0.55□□□□□ -2.5
COL3A1P02461 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.56□□□□□ -2.5
COL3A1P02461 SNORD54-201ENST00000459159 67 ntBASIC-0.56□□□□□ -2.5
COL3A1P02461 MIR4499-201ENST00000584834 69 ntBASIC-0.56□□□□□ -2.5
COL3A1P02461 uc_338.19-201ENST00000616808 99 ntBASIC-0.56□□□□□ -2.5
COL3A1P02461 RNU6-485P-201ENST00000363475 107 ntBASIC-0.57□□□□□ -2.5
COL3A1P02461 RNA5SP224-201ENST00000365069 126 ntBASIC-0.58□□□□□ -2.5
COL3A1P02461 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.59□□□□□ -2.5
COL3A1P02461 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-0.59□□□□□ -2.5
COL3A1P02461 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-0.59□□□□□ -2.5
COL3A1P02461 Y_RNA.260-201ENST00000364628 101 ntBASIC-0.6□□□□□ -2.5
COL3A1P02461 RNU6-345P-201ENST00000517001 107 ntBASIC-0.6□□□□□ -2.5
COL3A1P02461 FTX_4.1-201ENST00000616291 147 ntBASIC-0.6□□□□□ -2.5
COL3A1P02461 RNU6-1169P-201ENST00000363537 103 ntBASIC-0.61□□□□□ -2.51
COL3A1P02461 Y_RNA.335-201ENST00000365299 96 ntBASIC-0.61□□□□□ -2.51
COL3A1P02461 RNU6-1324P-201ENST00000384222 107 ntBASIC-0.61□□□□□ -2.51
COL3A1P02461 MIR548H1-201ENST00000408610 102 ntBASIC-0.61□□□□□ -2.51
COL3A1P02461 Y_RNA.449-201ENST00000384187 102 ntBASIC-0.62□□□□□ -2.51
COL3A1P02461 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-0.62□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 227 ms