Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 AC120024.2-201ENST00000576526 175 ntBASIC-1.3□□□□□ -2.62
PRPF40AO75400 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.31□□□□□ -2.62
PRPF40AO75400 RNU6-79P-201ENST00000362511 107 ntBASIC-1.32□□□□□ -2.62
PRPF40AO75400 MIR1207-201ENST00000408249 87 ntBASIC-1.32□□□□□ -2.62
PRPF40AO75400 RNY3P8-201ENST00000411366 126 ntBASIC-1.33□□□□□ -2.62
PRPF40AO75400 MIR1246-201ENST00000636535 73 ntBASIC-1.33□□□□□ -2.62
PRPF40AO75400 RNU6-530P-201ENST00000391180 107 ntBASIC-1.35□□□□□ -2.63
PRPF40AO75400 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.35□□□□□ -2.63
PRPF40AO75400 MIR6502-201ENST00000617296 76 ntBASIC-1.35□□□□□ -2.63
PRPF40AO75400 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.35□□□□□ -2.63
PRPF40AO75400 RNU4-33P-201ENST00000364316 85 ntBASIC-1.36□□□□□ -2.63
PRPF40AO75400 AC013734.1-201ENST00000619329 111 ntBASIC-1.36□□□□□ -2.63
PRPF40AO75400 RNY4P27-201ENST00000363341 96 ntBASIC-1.37□□□□□ -2.63
PRPF40AO75400 MIR4520-1-201ENST00000582609 70 ntBASIC-1.37□□□□□ -2.63
PRPF40AO75400 RNU6-936P-201ENST00000384005 107 ntBASIC-1.38□□□□□ -2.63
PRPF40AO75400 AC138207.3-201ENST00000585289 166 ntBASIC-1.38□□□□□ -2.63
PRPF40AO75400 HLA-S-202ENST00000425174 53 ntBASIC-1.4□□□□□ -2.63
PRPF40AO75400 Y_RNA.722-201ENST00000517279 114 ntBASIC-1.4□□□□□ -2.63
PRPF40AO75400 RNU6-980P-201ENST00000516925 103 ntBASIC-1.41□□□□□ -2.64
PRPF40AO75400 U6.97-201ENST00000636904 101 ntBASIC-1.41□□□□□ -2.64
PRPF40AO75400 RNU6-400P-201ENST00000391173 106 ntBASIC-1.42□□□□□ -2.64
PRPF40AO75400 RNU6-226P-201ENST00000363778 107 ntBASIC-1.44□□□□□ -2.64
PRPF40AO75400 RNU6-808P-201ENST00000391233 108 ntBASIC-1.44□□□□□ -2.64
PRPF40AO75400 MIR202-201ENST00000362219 110 ntBASIC-1.46□□□□□ -2.64
PRPF40AO75400 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.48□□□□□ -2.65
PRPF40AO75400 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.48□□□□□ -2.65
PRPF40AO75400 MIR5591-201ENST00000578248 65 ntBASIC-1.48□□□□□ -2.65
PRPF40AO75400 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.48□□□□□ -2.65
PRPF40AO75400 Y_RNA.379-201ENST00000365653 102 ntBASIC-1.5□□□□□ -2.65
PRPF40AO75400 RNU6-695P-201ENST00000391157 104 ntBASIC-1.5□□□□□ -2.65
PRPF40AO75400 MIR581-201ENST00000384895 96 ntBASIC-1.51□□□□□ -2.65
PRPF40AO75400 RNU6-361P-201ENST00000364454 107 ntBASIC-1.52□□□□□ -2.65
PRPF40AO75400 SNORD60-201ENST00000383903 83 ntBASIC-1.52□□□□□ -2.65
PRPF40AO75400 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.52□□□□□ -2.65
PRPF40AO75400 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.52□□□□□ -2.65
PRPF40AO75400 MIR4426-201ENST00000640330 63 ntBASIC-1.52□□□□□ -2.65
PRPF40AO75400 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.55□□□□□ -2.66
PRPF40AO75400 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.55□□□□□ -2.66
PRPF40AO75400 SNORA17.4-201ENST00000391287 132 ntBASIC-1.55□□□□□ -2.66
PRPF40AO75400 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.56□□□□□ -2.66
PRPF40AO75400 MIR487B-201ENST00000385021 84 ntBASIC-1.56□□□□□ -2.66
PRPF40AO75400 RNA5SP86-201ENST00000390869 98 ntBASIC-1.56□□□□□ -2.66
PRPF40AO75400 MIR4770-201ENST00000579149 58 ntBASIC-1.56□□□□□ -2.66
PRPF40AO75400 MIR3123-201ENST00000583417 75 ntBASIC-1.56□□□□□ -2.66
PRPF40AO75400 RNU6-753P-201ENST00000363926 107 ntBASIC-1.57□□□□□ -2.66
PRPF40AO75400 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.58□□□□□ -2.66
PRPF40AO75400 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.58□□□□□ -2.66
PRPF40AO75400 MIR548H1-201ENST00000408610 102 ntBASIC-1.59□□□□□ -2.66
PRPF40AO75400 MIR548N-201ENST00000408742 75 ntBASIC-1.59□□□□□ -2.66
PRPF40AO75400 RNU6-742P-201ENST00000365289 107 ntBASIC-1.61□□□□□ -2.67
PRPF40AO75400 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.61□□□□□ -2.67
PRPF40AO75400 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.61□□□□□ -2.67
PRPF40AO75400 RNU6-983P-201ENST00000516004 103 ntBASIC-1.61□□□□□ -2.67
PRPF40AO75400 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.62□□□□□ -2.67
PRPF40AO75400 SNORD18C-201ENST00000362704 69 ntBASIC-1.63□□□□□ -2.67
PRPF40AO75400 RNU6-987P-201ENST00000384759 104 ntBASIC-1.63□□□□□ -2.67
PRPF40AO75400 RNU6-119P-201ENST00000364882 107 ntBASIC-1.64□□□□□ -2.67
PRPF40AO75400 RNU6-300P-201ENST00000459080 104 ntBASIC-1.64□□□□□ -2.67
PRPF40AO75400 RNU4-37P-201ENST00000410214 84 ntBASIC-1.65□□□□□ -2.67
PRPF40AO75400 RNU6-176P-201ENST00000517196 105 ntBASIC-1.66□□□□□ -2.68
PRPF40AO75400 RNU6-141P-201ENST00000410499 105 ntBASIC-1.67□□□□□ -2.68
PRPF40AO75400 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.67□□□□□ -2.68
PRPF40AO75400 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.68□□□□□ -2.68
PRPF40AO75400 RNU6-841P-201ENST00000383872 107 ntBASIC-1.68□□□□□ -2.68
PRPF40AO75400 MIR548AL-201ENST00000578416 97 ntBASIC-1.68□□□□□ -2.68
PRPF40AO75400 MIR548AM-201ENST00000584298 74 ntBASIC-1.68□□□□□ -2.68
PRPF40AO75400 MIR496-201ENST00000385226 102 ntBASIC-1.69□□□□□ -2.68
PRPF40AO75400 snoU13.10-201ENST00000459301 103 ntBASIC-1.69□□□□□ -2.68
PRPF40AO75400 MIR548W-201ENST00000581970 74 ntBASIC-1.69□□□□□ -2.68
PRPF40AO75400 RNU6-838P-201ENST00000363399 108 ntBASIC-1.7□□□□□ -2.68
PRPF40AO75400 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.72□□□□□ -2.68
PRPF40AO75400 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.72□□□□□ -2.68
PRPF40AO75400 RNU6-68P-201ENST00000516576 104 ntBASIC-1.72□□□□□ -2.68
PRPF40AO75400 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.72□□□□□ -2.68
PRPF40AO75400 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.74□□□□□ -2.69
PRPF40AO75400 RNU6-930P-201ENST00000390938 100 ntBASIC-1.76□□□□□ -2.69
PRPF40AO75400 SNORD18.1-201ENST00000363807 70 ntBASIC-1.78□□□□□ -2.69
PRPF40AO75400 RNU6-1204P-201ENST00000363948 107 ntBASIC-1.78□□□□□ -2.69
PRPF40AO75400 RNU4-88P-201ENST00000411220 86 ntBASIC-1.78□□□□□ -2.69
PRPF40AO75400 AC108019.1-201ENST00000512540 175 ntBASIC-1.78□□□□□ -2.69
PRPF40AO75400 RNU6-912P-201ENST00000363800 104 ntBASIC-1.79□□□□□ -2.7
PRPF40AO75400 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.79□□□□□ -2.7
PRPF40AO75400 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.79□□□□□ -2.7
PRPF40AO75400 RNY4P7-201ENST00000364600 96 ntBASIC-1.81□□□□□ -2.7
PRPF40AO75400 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.81□□□□□ -2.7
PRPF40AO75400 MIR4756-201ENST00000577874 78 ntBASIC-1.81□□□□□ -2.7
PRPF40AO75400 MIR4317-201ENST00000637586 65 ntBASIC-1.81□□□□□ -2.7
PRPF40AO75400 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.82□□□□□ -2.7
PRPF40AO75400 RNU6-118P-201ENST00000516552 102 ntBASIC-1.83□□□□□ -2.7
PRPF40AO75400 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.83□□□□□ -2.7
PRPF40AO75400 MIR379-201ENST00000362218 67 ntBASIC-1.84□□□□□ -2.7
PRPF40AO75400 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.84□□□□□ -2.7
PRPF40AO75400 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.84□□□□□ -2.7
PRPF40AO75400 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.85□□□□□ -2.71
PRPF40AO75400 SNORD54-201ENST00000459159 67 ntBASIC-1.86□□□□□ -2.71
PRPF40AO75400 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.87□□□□□ -2.71
PRPF40AO75400 SNORD113-3-201ENST00000364830 72 ntBASIC-1.91□□□□□ -2.72
PRPF40AO75400 MIR548H4-201ENST00000408689 111 ntBASIC-1.92□□□□□ -2.72
PRPF40AO75400 AC097484.2-201ENST00000509147 251 ntBASIC-1.92□□□□□ -2.72
PRPF40AO75400 MIR548F3-201ENST00000408509 87 ntBASIC-1.93□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 248.2 ms