Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 RNU6-829P-201ENST00000363700 112 ntBASIC-1.56□□□□□ -2.66
CCDC163A0A0D9SF12 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.57□□□□□ -2.66
CCDC163A0A0D9SF12 RNU6-499P-201ENST00000365615 107 ntBASIC-1.6□□□□□ -2.67
CCDC163A0A0D9SF12 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.6□□□□□ -2.67
CCDC163A0A0D9SF12 SNORD18.1-201ENST00000363807 70 ntBASIC-1.61□□□□□ -2.67
CCDC163A0A0D9SF12 RNU6-419P-201ENST00000517030 63 ntBASIC-1.61□□□□□ -2.67
CCDC163A0A0D9SF12 AC120024.2-201ENST00000576526 175 ntBASIC-1.61□□□□□ -2.67
CCDC163A0A0D9SF12 AC091912.2-201ENST00000624798 167 ntBASIC-1.61□□□□□ -2.67
CCDC163A0A0D9SF12 MIR6874-201ENST00000635894 71 ntBASIC-1.61□□□□□ -2.67
CCDC163A0A0D9SF12 RNY3P8-201ENST00000411366 126 ntBASIC-1.62□□□□□ -2.67
CCDC163A0A0D9SF12 AL451105.1-201ENST00000450005 189 ntBASIC-1.62□□□□□ -2.67
CCDC163A0A0D9SF12 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.63□□□□□ -2.67
CCDC163A0A0D9SF12 RNU6-530P-201ENST00000391180 107 ntBASIC-1.63□□□□□ -2.67
CCDC163A0A0D9SF12 MIR548H1-201ENST00000408610 102 ntBASIC-1.65□□□□□ -2.67
CCDC163A0A0D9SF12 AC079150.2-201ENST00000443733 78 ntBASIC-1.65□□□□□ -2.67
CCDC163A0A0D9SF12 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.65□□□□□ -2.67
CCDC163A0A0D9SF12 SNORD113-4-201ENST00000364802 75 ntBASIC-1.66□□□□□ -2.68
CCDC163A0A0D9SF12 RNY4P27-201ENST00000363341 96 ntBASIC-1.68□□□□□ -2.68
CCDC163A0A0D9SF12 MIR548X-201ENST00000580069 75 ntBASIC-1.68□□□□□ -2.68
CCDC163A0A0D9SF12 RNU6-563P-201ENST00000364872 108 ntBASIC-1.69□□□□□ -2.68
CCDC163A0A0D9SF12 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.7□□□□□ -2.68
CCDC163A0A0D9SF12 U6.97-201ENST00000636904 101 ntBASIC-1.72□□□□□ -2.68
CCDC163A0A0D9SF12 MIR202-201ENST00000362219 110 ntBASIC-1.73□□□□□ -2.69
CCDC163A0A0D9SF12 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.73□□□□□ -2.69
CCDC163A0A0D9SF12 MIR487B-201ENST00000385021 84 ntBASIC-1.73□□□□□ -2.69
CCDC163A0A0D9SF12 AC013734.1-201ENST00000619329 111 ntBASIC-1.73□□□□□ -2.69
CCDC163A0A0D9SF12 RNU6-400P-201ENST00000391173 106 ntBASIC-1.74□□□□□ -2.69
CCDC163A0A0D9SF12 AC108019.1-201ENST00000512540 175 ntBASIC-1.74□□□□□ -2.69
CCDC163A0A0D9SF12 RNU6-79P-201ENST00000362511 107 ntBASIC-1.75□□□□□ -2.69
CCDC163A0A0D9SF12 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.76□□□□□ -2.69
CCDC163A0A0D9SF12 SNORD60-201ENST00000383903 83 ntBASIC-1.77□□□□□ -2.69
CCDC163A0A0D9SF12 MIR664B-201ENST00000626756 61 ntBASIC-1.77□□□□□ -2.69
CCDC163A0A0D9SF12 MIR4756-201ENST00000577874 78 ntBASIC-1.78□□□□□ -2.69
CCDC163A0A0D9SF12 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.8□□□□□ -2.7
CCDC163A0A0D9SF12 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.8□□□□□ -2.7
CCDC163A0A0D9SF12 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.81□□□□□ -2.7
CCDC163A0A0D9SF12 SNORA17.4-201ENST00000391287 132 ntBASIC-1.81□□□□□ -2.7
CCDC163A0A0D9SF12 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.82□□□□□ -2.7
CCDC163A0A0D9SF12 MIR4426-201ENST00000640330 63 ntBASIC-1.83□□□□□ -2.7
CCDC163A0A0D9SF12 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.84□□□□□ -2.7
CCDC163A0A0D9SF12 RNU4-33P-201ENST00000364316 85 ntBASIC-1.84□□□□□ -2.7
CCDC163A0A0D9SF12 MIR496-201ENST00000385226 102 ntBASIC-1.84□□□□□ -2.7
CCDC163A0A0D9SF12 RNU6-118P-201ENST00000516552 102 ntBASIC-1.84□□□□□ -2.7
CCDC163A0A0D9SF12 RNU6-980P-201ENST00000516925 103 ntBASIC-1.84□□□□□ -2.7
CCDC163A0A0D9SF12 RNU6-614P-201ENST00000384369 107 ntBASIC-1.85□□□□□ -2.71
CCDC163A0A0D9SF12 U6.59-201ENST00000615686 107 ntBASIC-1.85□□□□□ -2.71
CCDC163A0A0D9SF12 RNU6-361P-201ENST00000364454 107 ntBASIC-1.86□□□□□ -2.71
CCDC163A0A0D9SF12 RNU6-119P-201ENST00000364882 107 ntBASIC-1.88□□□□□ -2.71
CCDC163A0A0D9SF12 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.89□□□□□ -2.71
CCDC163A0A0D9SF12 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.9□□□□□ -2.71
CCDC163A0A0D9SF12 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.91□□□□□ -2.72
CCDC163A0A0D9SF12 MIR3139-201ENST00000579145 76 ntBASIC-1.91□□□□□ -2.72
CCDC163A0A0D9SF12 RNA5SP405-201ENST00000363059 114 ntBASIC-1.92□□□□□ -2.72
CCDC163A0A0D9SF12 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.92□□□□□ -2.72
CCDC163A0A0D9SF12 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.92□□□□□ -2.72
CCDC163A0A0D9SF12 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.92□□□□□ -2.72
CCDC163A0A0D9SF12 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.92□□□□□ -2.72
CCDC163A0A0D9SF12 RNU6-300P-201ENST00000459080 104 ntBASIC-1.93□□□□□ -2.72
CCDC163A0A0D9SF12 RNU6-742P-201ENST00000365289 107 ntBASIC-1.94□□□□□ -2.72
CCDC163A0A0D9SF12 RNU6-936P-201ENST00000384005 107 ntBASIC-1.94□□□□□ -2.72
CCDC163A0A0D9SF12 RNU6-695P-201ENST00000391157 104 ntBASIC-1.94□□□□□ -2.72
CCDC163A0A0D9SF12 RNU6-841P-201ENST00000383872 107 ntBASIC-1.96□□□□□ -2.72
CCDC163A0A0D9SF12 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.97□□□□□ -2.72
CCDC163A0A0D9SF12 Y_RNA.722-201ENST00000517279 114 ntBASIC-1.97□□□□□ -2.72
CCDC163A0A0D9SF12 MTND4LP19-201ENST00000403051 166 ntBASIC-1.98□□□□□ -2.73
CCDC163A0A0D9SF12 MIR548N-201ENST00000408742 75 ntBASIC-1.98□□□□□ -2.73
CCDC163A0A0D9SF12 SNORD18C-201ENST00000362704 69 ntBASIC-1.99□□□□□ -2.73
CCDC163A0A0D9SF12 MT-TM-201ENST00000387377 68 ntBASIC-2□□□□□ -2.73
CCDC163A0A0D9SF12 SNORD54-201ENST00000459159 67 ntBASIC-2.01□□□□□ -2.73
CCDC163A0A0D9SF12 RNU6-176P-201ENST00000517196 105 ntBASIC-2.01□□□□□ -2.73
CCDC163A0A0D9SF12 MIR3123-201ENST00000583417 75 ntBASIC-2.01□□□□□ -2.73
CCDC163A0A0D9SF12 Y_RNA.228-201ENST00000364346 98 ntBASIC-2.02□□□□□ -2.73
CCDC163A0A0D9SF12 MIR581-201ENST00000384895 96 ntBASIC-2.02□□□□□ -2.73
CCDC163A0A0D9SF12 RNU6-194P-201ENST00000363862 105 ntBASIC-2.04□□□□□ -2.74
CCDC163A0A0D9SF12 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.04□□□□□ -2.74
CCDC163A0A0D9SF12 MIR548AM-201ENST00000584298 74 ntBASIC-2.05□□□□□ -2.74
CCDC163A0A0D9SF12 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.07□□□□□ -2.74
CCDC163A0A0D9SF12 RNU4-88P-201ENST00000411220 86 ntBASIC-2.07□□□□□ -2.74
CCDC163A0A0D9SF12 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.07□□□□□ -2.74
CCDC163A0A0D9SF12 RNU6-753P-201ENST00000363926 107 ntBASIC-2.08□□□□□ -2.74
CCDC163A0A0D9SF12 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.08□□□□□ -2.74
CCDC163A0A0D9SF12 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.08□□□□□ -2.74
CCDC163A0A0D9SF12 RNA5SP93-201ENST00000362525 114 ntBASIC-2.09□□□□□ -2.74
CCDC163A0A0D9SF12 Y_RNA.379-201ENST00000365653 102 ntBASIC-2.09□□□□□ -2.74
CCDC163A0A0D9SF12 RNU6-808P-201ENST00000391233 108 ntBASIC-2.09□□□□□ -2.74
CCDC163A0A0D9SF12 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.1□□□□□ -2.75
CCDC163A0A0D9SF12 MIR548AL-201ENST00000578416 97 ntBASIC-2.13□□□□□ -2.75
CCDC163A0A0D9SF12 MIR4317-201ENST00000637586 65 ntBASIC-2.15□□□□□ -2.75
CCDC163A0A0D9SF12 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.16□□□□□ -2.76
CCDC163A0A0D9SF12 Y_RNA.403-201ENST00000383977 101 ntBASIC-2.16□□□□□ -2.76
CCDC163A0A0D9SF12 MIR4748-201ENST00000578076 82 ntBASIC-2.16□□□□□ -2.76
CCDC163A0A0D9SF12 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.19□□□□□ -2.76
CCDC163A0A0D9SF12 Y_RNA.129-201ENST00000363392 110 ntBASIC-2.2□□□□□ -2.76
CCDC163A0A0D9SF12 RNU6-1047P-201ENST00000364418 107 ntBASIC-2.2□□□□□ -2.76
CCDC163A0A0D9SF12 MIR379-201ENST00000362218 67 ntBASIC-2.21□□□□□ -2.76
CCDC163A0A0D9SF12 RNU6-838P-201ENST00000363399 108 ntBASIC-2.21□□□□□ -2.76
CCDC163A0A0D9SF12 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-2.21□□□□□ -2.76
CCDC163A0A0D9SF12 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.22□□□□□ -2.76
CCDC163A0A0D9SF12 RNU6-1204P-201ENST00000363948 107 ntBASIC-2.24□□□□□ -2.77
CCDC163A0A0D9SF12 RNY4P7-201ENST00000364600 96 ntBASIC-2.25□□□□□ -2.77
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms