Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 Y_RNA.345-201ENST00000365384 92 ntBASIC0.26□□□□□ -2.37
NOTCH3Q9UM47 AC244250.2-201ENST00000418731 148 ntBASIC0.26□□□□□ -2.37
NOTCH3Q9UM47 MIR4667-201ENST00000578933 66 ntBASIC0.26□□□□□ -2.37
NOTCH3Q9UM47 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
NOTCH3Q9UM47 RNU6-973P-201ENST00000364690 107 ntBASIC0.25□□□□□ -2.37
NOTCH3Q9UM47 RNU6-1111P-201ENST00000391118 107 ntBASIC0.25□□□□□ -2.37
NOTCH3Q9UM47 SNORD19-201ENST00000391191 68 ntBASIC0.25□□□□□ -2.37
NOTCH3Q9UM47 RNA5SP169-201ENST00000517268 117 ntBASIC0.25□□□□□ -2.37
NOTCH3Q9UM47 MIR610-201ENST00000385139 96 ntBASIC0.25□□□□□ -2.37
NOTCH3Q9UM47 MIR214-201ENST00000385214 110 ntBASIC0.25□□□□□ -2.37
NOTCH3Q9UM47 AC069113.3-201ENST00000521019 150 ntBASIC0.25□□□□□ -2.37
NOTCH3Q9UM47 RNA5SP214-201ENST00000363378 118 ntBASIC0.24□□□□□ -2.37
NOTCH3Q9UM47 AL353691.2-201ENST00000443795 59 ntBASIC0.24□□□□□ -2.37
NOTCH3Q9UM47 RNU6-127P-201ENST00000390897 107 ntBASIC0.23□□□□□ -2.37
NOTCH3Q9UM47 MIR4280-201ENST00000582178 76 ntBASIC0.23□□□□□ -2.37
NOTCH3Q9UM47 SNORA50A-201ENST00000384225 134 ntBASIC0.22□□□□□ -2.37
NOTCH3Q9UM47 MIR593-201ENST00000384856 100 ntBASIC0.22□□□□□ -2.37
NOTCH3Q9UM47 MIR496-201ENST00000385226 102 ntBASIC0.22□□□□□ -2.37
NOTCH3Q9UM47 RNU7-165P-201ENST00000458864 60 ntBASIC0.22□□□□□ -2.37
NOTCH3Q9UM47 SNORD114-28-201ENST00000363610 72 ntBASIC0.22□□□□□ -2.37
NOTCH3Q9UM47 MIR587-201ENST00000384845 96 ntBASIC0.22□□□□□ -2.37
NOTCH3Q9UM47 SNORA26.4-201ENST00000391188 123 ntBASIC0.22□□□□□ -2.37
NOTCH3Q9UM47 MIR520D-201ENST00000385002 87 ntBASIC0.21□□□□□ -2.38
NOTCH3Q9UM47 RNU6-258P-201ENST00000390884 101 ntBASIC0.21□□□□□ -2.38
NOTCH3Q9UM47 MIR3681-201ENST00000580089 72 ntBASIC0.21□□□□□ -2.38
NOTCH3Q9UM47 MIR6514-201ENST00000622549 70 ntBASIC0.21□□□□□ -2.38
NOTCH3Q9UM47 AC090625.1-201ENST00000357130 210 ntBASIC0.21□□□□□ -2.38
NOTCH3Q9UM47 RNU6-1327P-201ENST00000365302 105 ntBASIC0.21□□□□□ -2.38
NOTCH3Q9UM47 SNORD22.1-201ENST00000516331 125 ntBASIC0.21□□□□□ -2.38
NOTCH3Q9UM47 MIR4743-201ENST00000584576 69 ntBASIC0.21□□□□□ -2.38
NOTCH3Q9UM47 AC138207.3-201ENST00000585289 166 ntBASIC0.21□□□□□ -2.38
NOTCH3Q9UM47 MIR6851-201ENST00000617060 67 ntBASIC0.21□□□□□ -2.38
NOTCH3Q9UM47 RNA5SP451-201ENST00000410588 110 ntBASIC0.2□□□□□ -2.38
NOTCH3Q9UM47 RNA5SP461-201ENST00000516451 104 ntBASIC0.2□□□□□ -2.38
NOTCH3Q9UM47 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC0.2□□□□□ -2.38
NOTCH3Q9UM47 MIRLET7D-201ENST00000362263 87 ntBASIC0.2□□□□□ -2.38
NOTCH3Q9UM47 SNORA27.2-201ENST00000363365 126 ntBASIC0.2□□□□□ -2.38
NOTCH3Q9UM47 SNORD114-9-201ENST00000364370 72 ntBASIC0.2□□□□□ -2.38
NOTCH3Q9UM47 RNU6-300P-201ENST00000459080 104 ntBASIC0.2□□□□□ -2.38
NOTCH3Q9UM47 MIR4768-201ENST00000585270 74 ntBASIC0.2□□□□□ -2.38
NOTCH3Q9UM47 MIR145-201ENST00000384967 88 ntBASIC0.19□□□□□ -2.38
NOTCH3Q9UM47 MIR548N-201ENST00000408742 75 ntBASIC0.19□□□□□ -2.38
NOTCH3Q9UM47 RNU4-63P-201ENST00000411313 118 ntBASIC0.19□□□□□ -2.38
NOTCH3Q9UM47 RNA5SP180-201ENST00000516181 101 ntBASIC0.19□□□□□ -2.38
NOTCH3Q9UM47 MIR6507-201ENST00000613630 70 ntBASIC0.19□□□□□ -2.38
NOTCH3Q9UM47 RNU6-1233P-201ENST00000362922 102 ntBASIC0.18□□□□□ -2.38
NOTCH3Q9UM47 RNU6-485P-201ENST00000363475 107 ntBASIC0.18□□□□□ -2.38
NOTCH3Q9UM47 RNU6-608P-201ENST00000383927 104 ntBASIC0.18□□□□□ -2.38
NOTCH3Q9UM47 Y_RNA.421-201ENST00000384052 101 ntBASIC0.18□□□□□ -2.38
NOTCH3Q9UM47 RNU6-929P-201ENST00000384429 107 ntBASIC0.18□□□□□ -2.38
NOTCH3Q9UM47 RNY3P8-201ENST00000411366 126 ntBASIC0.18□□□□□ -2.38
NOTCH3Q9UM47 Y_RNA.699-201ENST00000516803 93 ntBASIC0.18□□□□□ -2.38
NOTCH3Q9UM47 MIR379-201ENST00000362218 67 ntBASIC0.18□□□□□ -2.38
NOTCH3Q9UM47 SNORD114-5-201ENST00000362928 70 ntBASIC0.18□□□□□ -2.38
NOTCH3Q9UM47 SNORA42.1-201ENST00000363515 137 ntBASIC0.18□□□□□ -2.38
NOTCH3Q9UM47 RNU6-10P-201ENST00000384036 107 ntBASIC0.18□□□□□ -2.38
NOTCH3Q9UM47 SNORD54-201ENST00000459159 67 ntBASIC0.18□□□□□ -2.38
NOTCH3Q9UM47 RNU6-176P-201ENST00000517196 105 ntBASIC0.18□□□□□ -2.38
NOTCH3Q9UM47 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.18□□□□□ -2.38
NOTCH3Q9UM47 MIR202-201ENST00000362219 110 ntBASIC0.16□□□□□ -2.38
NOTCH3Q9UM47 RNA5SP93-201ENST00000362525 114 ntBASIC0.16□□□□□ -2.38
NOTCH3Q9UM47 SNORD60-201ENST00000383903 83 ntBASIC0.16□□□□□ -2.38
NOTCH3Q9UM47 AC120024.2-201ENST00000576526 175 ntBASIC0.16□□□□□ -2.38
NOTCH3Q9UM47 RNU6-815P-201ENST00000384080 113 ntBASIC0.15□□□□□ -2.38
NOTCH3Q9UM47 RNU6-1326P-201ENST00000391262 107 ntBASIC0.15□□□□□ -2.38
NOTCH3Q9UM47 RNU6-732P-201ENST00000516033 103 ntBASIC0.15□□□□□ -2.38
NOTCH3Q9UM47 MIR371B-201ENST00000638082 66 ntBASIC0.15□□□□□ -2.39
NOTCH3Q9UM47 RNU6-133P-201ENST00000383989 107 ntBASIC0.14□□□□□ -2.39
NOTCH3Q9UM47 SNORA32.3-201ENST00000384772 121 ntBASIC0.14□□□□□ -2.39
NOTCH3Q9UM47 SNORD38.3-201ENST00000516599 73 ntBASIC0.14□□□□□ -2.39
NOTCH3Q9UM47 SNORD115-33-201ENST00000363723 82 ntBASIC0.14□□□□□ -2.39
NOTCH3Q9UM47 SNORA17.4-201ENST00000391287 132 ntBASIC0.14□□□□□ -2.39
NOTCH3Q9UM47 MIR5093-201ENST00000583199 100 ntBASIC0.14□□□□□ -2.39
NOTCH3Q9UM47 MIR148A-201ENST00000362215 68 ntBASIC0.13□□□□□ -2.39
NOTCH3Q9UM47 SNORD114-11-201ENST00000363738 75 ntBASIC0.13□□□□□ -2.39
NOTCH3Q9UM47 SNORD114-12-201ENST00000365400 75 ntBASIC0.13□□□□□ -2.39
NOTCH3Q9UM47 SNORD75.1-201ENST00000408373 60 ntBASIC0.13□□□□□ -2.39
NOTCH3Q9UM47 MIR5683-201ENST00000636514 76 ntBASIC0.13□□□□□ -2.39
NOTCH3Q9UM47 MIR655-201ENST00000362159 97 ntBASIC0.12□□□□□ -2.39
NOTCH3Q9UM47 MIR3179-1-201ENST00000578940 84 ntBASIC0.12□□□□□ -2.39
NOTCH3Q9UM47 MIR3179-2-201ENST00000579107 84 ntBASIC0.12□□□□□ -2.39
NOTCH3Q9UM47 MIR3179-3-201ENST00000579566 84 ntBASIC0.12□□□□□ -2.39
NOTCH3Q9UM47 MIR3179-4-201ENST00000617599 84 ntBASIC0.12□□□□□ -2.39
NOTCH3Q9UM47 Y_RNA.189-201ENST00000363959 112 ntBASIC0.12□□□□□ -2.39
NOTCH3Q9UM47 MIR518B-201ENST00000385127 83 ntBASIC0.12□□□□□ -2.39
NOTCH3Q9UM47 RNU6-894P-201ENST00000517094 105 ntBASIC0.12□□□□□ -2.39
NOTCH3Q9UM47 AC093726.3-201ENST00000637588 150 ntBASIC0.12□□□□□ -2.39
NOTCH3Q9UM47 SNORD74.6-201ENST00000364796 70 ntBASIC0.11□□□□□ -2.39
NOTCH3Q9UM47 AL445193.1-201ENST00000441183 141 ntBASIC0.11□□□□□ -2.39
NOTCH3Q9UM47 AP000533.3-201ENST00000447704 118 ntBASIC0.11□□□□□ -2.39
NOTCH3Q9UM47 SNORA13-201ENST00000458790 133 ntBASIC0.11□□□□□ -2.39
NOTCH3Q9UM47 MIR4290-201ENST00000583807 95 ntBASIC0.11□□□□□ -2.39
NOTCH3Q9UM47 MIR4263-201ENST00000584745 83 ntBASIC0.11□□□□□ -2.39
NOTCH3Q9UM47 RNU6-1047P-201ENST00000364418 107 ntBASIC0.1□□□□□ -2.39
NOTCH3Q9UM47 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC0.1□□□□□ -2.39
NOTCH3Q9UM47 Y_RNA.382-201ENST00000365672 114 ntBASIC0.09□□□□□ -2.39
NOTCH3Q9UM47 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.09□□□□□ -2.39
NOTCH3Q9UM47 AL590491.3-201ENST00000610731 82 ntBASIC0.09□□□□□ -2.4
NOTCH3Q9UM47 SNORD114-16-201ENST00000363044 70 ntBASIC0.08□□□□□ -2.4
NOTCH3Q9UM47 SNORD114-17-201ENST00000364699 75 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms