Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 RNU6-164P-201ENST00000364604 103 ntBASIC-1.17□□□□□ -2.6
RAI1Q7Z5J4 RNU6-411P-201ENST00000384451 107 ntBASIC-1.17□□□□□ -2.6
RAI1Q7Z5J4 SNORD116-24-201ENST00000384549 92 ntBASIC-1.17□□□□□ -2.6
RAI1Q7Z5J4 RNU6-573P-201ENST00000383938 106 ntBASIC-1.18□□□□□ -2.6
RAI1Q7Z5J4 RNU6-242P-201ENST00000384359 107 ntBASIC-1.18□□□□□ -2.6
RAI1Q7Z5J4 RNU6-857P-201ENST00000515893 110 ntBASIC-1.18□□□□□ -2.6
RAI1Q7Z5J4 RNA5SP180-201ENST00000516181 101 ntBASIC-1.18□□□□□ -2.6
RAI1Q7Z5J4 RNU6-92P-201ENST00000605893 104 ntBASIC-1.18□□□□□ -2.6
RAI1Q7Z5J4 SNORD60.1-201ENST00000362451 73 ntBASIC-1.19□□□□□ -2.6
RAI1Q7Z5J4 RNU6-634P-201ENST00000459134 106 ntBASIC-1.2□□□□□ -2.6
RAI1Q7Z5J4 RNU6-687P-201ENST00000516443 89 ntBASIC-1.2□□□□□ -2.6
RAI1Q7Z5J4 RNU6-247P-201ENST00000362636 107 ntBASIC-1.21□□□□□ -2.6
RAI1Q7Z5J4 MIR23C-201ENST00000579846 100 ntBASIC-1.21□□□□□ -2.6
RAI1Q7Z5J4 MIR3170-201ENST00000582699 77 ntBASIC-1.21□□□□□ -2.6
RAI1Q7Z5J4 AC091912.2-201ENST00000624798 167 ntBASIC-1.21□□□□□ -2.6
RAI1Q7Z5J4 AC090616.4-201ENST00000448026 115 ntBASIC-1.22□□□□□ -2.6
RAI1Q7Z5J4 RNU6-732P-201ENST00000516033 103 ntBASIC-1.22□□□□□ -2.6
RAI1Q7Z5J4 RNA5SP26-201ENST00000362406 119 ntBASIC-1.23□□□□□ -2.61
RAI1Q7Z5J4 RNU6-79P-201ENST00000362511 107 ntBASIC-1.23□□□□□ -2.61
RAI1Q7Z5J4 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.23□□□□□ -2.61
RAI1Q7Z5J4 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.23□□□□□ -2.61
RAI1Q7Z5J4 AC120024.2-201ENST00000576526 175 ntBASIC-1.23□□□□□ -2.61
RAI1Q7Z5J4 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.24□□□□□ -2.61
RAI1Q7Z5J4 RNU6-119P-201ENST00000364882 107 ntBASIC-1.24□□□□□ -2.61
RAI1Q7Z5J4 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.24□□□□□ -2.61
RAI1Q7Z5J4 RNU6-895P-201ENST00000384125 103 ntBASIC-1.24□□□□□ -2.61
RAI1Q7Z5J4 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.25□□□□□ -2.61
RAI1Q7Z5J4 MIR7978-201ENST00000636158 59 ntBASIC-1.25□□□□□ -2.61
RAI1Q7Z5J4 RNY4P27-201ENST00000363341 96 ntBASIC-1.26□□□□□ -2.61
RAI1Q7Z5J4 RNU6-669P-201ENST00000365575 107 ntBASIC-1.26□□□□□ -2.61
RAI1Q7Z5J4 RNU6-540P-201ENST00000384622 101 ntBASIC-1.26□□□□□ -2.61
RAI1Q7Z5J4 SNORA25.4-201ENST00000363666 124 ntBASIC-1.27□□□□□ -2.61
RAI1Q7Z5J4 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.27□□□□□ -2.61
RAI1Q7Z5J4 RNU6-695P-201ENST00000391157 104 ntBASIC-1.27□□□□□ -2.61
RAI1Q7Z5J4 MIR548H1-201ENST00000408610 102 ntBASIC-1.27□□□□□ -2.61
RAI1Q7Z5J4 MIR3938-201ENST00000582157 103 ntBASIC-1.28□□□□□ -2.61
RAI1Q7Z5J4 MIR6874-201ENST00000635894 71 ntBASIC-1.28□□□□□ -2.61
RAI1Q7Z5J4 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.28□□□□□ -2.62
RAI1Q7Z5J4 RNU6-983P-201ENST00000516004 103 ntBASIC-1.28□□□□□ -2.62
RAI1Q7Z5J4 MIR4511-201ENST00000582784 87 ntBASIC-1.28□□□□□ -2.62
RAI1Q7Z5J4 MIR4679-1-201ENST00000637619 75 ntBASIC-1.28□□□□□ -2.62
RAI1Q7Z5J4 SNORD78.1-201ENST00000390866 65 ntBASIC-1.29□□□□□ -2.62
RAI1Q7Z5J4 MIR664B-201ENST00000626756 61 ntBASIC-1.29□□□□□ -2.62
RAI1Q7Z5J4 MIR4662A-201ENST00000637499 67 ntBASIC-1.29□□□□□ -2.62
RAI1Q7Z5J4 RNU6-608P-201ENST00000383927 104 ntBASIC-1.3□□□□□ -2.62
RAI1Q7Z5J4 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.3□□□□□ -2.62
RAI1Q7Z5J4 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.3□□□□□ -2.62
RAI1Q7Z5J4 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.3□□□□□ -2.62
RAI1Q7Z5J4 RNU6-471P-201ENST00000383944 106 ntBASIC-1.3□□□□□ -2.62
RAI1Q7Z5J4 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.3□□□□□ -2.62
RAI1Q7Z5J4 RNU6-523P-201ENST00000516304 54 ntBASIC-1.3□□□□□ -2.62
RAI1Q7Z5J4 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.31□□□□□ -2.62
RAI1Q7Z5J4 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.31□□□□□ -2.62
RAI1Q7Z5J4 RNA5SP86-201ENST00000390869 98 ntBASIC-1.31□□□□□ -2.62
RAI1Q7Z5J4 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.31□□□□□ -2.62
RAI1Q7Z5J4 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.31□□□□□ -2.62
RAI1Q7Z5J4 RNU6-871P-201ENST00000516122 100 ntBASIC-1.31□□□□□ -2.62
RAI1Q7Z5J4 SNORD18.1-201ENST00000363807 70 ntBASIC-1.32□□□□□ -2.62
RAI1Q7Z5J4 SNORD60-201ENST00000383903 83 ntBASIC-1.32□□□□□ -2.62
RAI1Q7Z5J4 MIR487B-201ENST00000385021 84 ntBASIC-1.32□□□□□ -2.62
RAI1Q7Z5J4 Y_RNA.685-201ENST00000516532 108 ntBASIC-1.32□□□□□ -2.62
RAI1Q7Z5J4 SNORA27.2-201ENST00000363365 126 ntBASIC-1.33□□□□□ -2.62
RAI1Q7Z5J4 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.33□□□□□ -2.62
RAI1Q7Z5J4 RPL35AP4-201ENST00000412007 102 ntBASIC-1.33□□□□□ -2.62
RAI1Q7Z5J4 AC108019.1-201ENST00000512540 175 ntBASIC-1.33□□□□□ -2.62
RAI1Q7Z5J4 RNU6-539P-201ENST00000516665 103 ntBASIC-1.33□□□□□ -2.62
RAI1Q7Z5J4 MIR4756-201ENST00000577874 78 ntBASIC-1.34□□□□□ -2.62
RAI1Q7Z5J4 RNU6-995P-201ENST00000391244 107 ntBASIC-1.34□□□□□ -2.62
RAI1Q7Z5J4 SNORD30.1-201ENST00000391309 70 ntBASIC-1.34□□□□□ -2.62
RAI1Q7Z5J4 RNU6-598P-201ENST00000364017 105 ntBASIC-1.35□□□□□ -2.63
RAI1Q7Z5J4 MIR520D-201ENST00000385002 87 ntBASIC-1.35□□□□□ -2.63
RAI1Q7Z5J4 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.36□□□□□ -2.63
RAI1Q7Z5J4 MIR579-201ENST00000385221 98 ntBASIC-1.36□□□□□ -2.63
RAI1Q7Z5J4 RNU6-400P-201ENST00000391173 106 ntBASIC-1.36□□□□□ -2.63
RAI1Q7Z5J4 AC110620.1-201ENST00000416042 228 ntBASIC-1.36□□□□□ -2.63
RAI1Q7Z5J4 RNU6-520P-201ENST00000384717 104 ntBASIC-1.37□□□□□ -2.63
RAI1Q7Z5J4 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.38□□□□□ -2.63
RAI1Q7Z5J4 SNORA40B-201ENST00000385573 128 ntBASIC-1.38□□□□□ -2.63
RAI1Q7Z5J4 RNU6-1275P-201ENST00000391087 107 ntBASIC-1.38□□□□□ -2.63
RAI1Q7Z5J4 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.38□□□□□ -2.63
RAI1Q7Z5J4 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.38□□□□□ -2.63
RAI1Q7Z5J4 RNU6-974P-201ENST00000384099 108 ntBASIC-1.38□□□□□ -2.63
RAI1Q7Z5J4 SNORD116.2-201ENST00000391251 93 ntBASIC-1.38□□□□□ -2.63
RAI1Q7Z5J4 RNU6-172P-201ENST00000411000 93 ntBASIC-1.38□□□□□ -2.63
RAI1Q7Z5J4 SNORD45.2-201ENST00000363552 72 ntBASIC-1.39□□□□□ -2.63
RAI1Q7Z5J4 RNU6-810P-201ENST00000364001 107 ntBASIC-1.4□□□□□ -2.63
RAI1Q7Z5J4 RNU6-776P-201ENST00000364403 104 ntBASIC-1.4□□□□□ -2.63
RAI1Q7Z5J4 RNU6-1022P-201ENST00000365049 104 ntBASIC-1.4□□□□□ -2.63
RAI1Q7Z5J4 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.4□□□□□ -2.63
RAI1Q7Z5J4 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.4□□□□□ -2.63
RAI1Q7Z5J4 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.4□□□□□ -2.63
RAI1Q7Z5J4 RNU6-841P-201ENST00000383872 107 ntBASIC-1.4□□□□□ -2.63
RAI1Q7Z5J4 RNU7-119P-201ENST00000459279 63 ntBASIC-1.4□□□□□ -2.63
RAI1Q7Z5J4 AC103706.3-201ENST00000636297 85 ntBASIC-1.4□□□□□ -2.63
RAI1Q7Z5J4 RNU7-160P-201ENST00000516660 62 ntBASIC-1.42□□□□□ -2.64
RAI1Q7Z5J4 MIR7110-201ENST00000612638 86 ntBASIC-1.42□□□□□ -2.64
RAI1Q7Z5J4 RNU6-649P-201ENST00000384463 107 ntBASIC-1.43□□□□□ -2.64
RAI1Q7Z5J4 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.43□□□□□ -2.64
RAI1Q7Z5J4 MIR548AM-201ENST00000584298 74 ntBASIC-1.43□□□□□ -2.64
RAI1Q7Z5J4 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.43□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 8.6 ms