Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 RNU6-194P-201ENST00000363862 105 ntBASIC-1.55□□□□□ -2.66
RFX4Q33E94 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.55□□□□□ -2.66
RFX4Q33E94 MIR154-201ENST00000385243 84 ntBASIC-1.55□□□□□ -2.66
RFX4Q33E94 MIR548AI-201ENST00000579940 88 ntBASIC-1.55□□□□□ -2.66
RFX4Q33E94 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.56□□□□□ -2.66
RFX4Q33E94 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.56□□□□□ -2.66
RFX4Q33E94 RNU6-995P-201ENST00000391244 107 ntBASIC-1.56□□□□□ -2.66
RFX4Q33E94 RNU7-171P-201ENST00000459581 62 ntBASIC-1.56□□□□□ -2.66
RFX4Q33E94 RNU6-70P-201ENST00000516438 60 ntBASIC-1.56□□□□□ -2.66
RFX4Q33E94 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.56□□□□□ -2.66
RFX4Q33E94 RNU6-247P-201ENST00000362636 107 ntBASIC-1.57□□□□□ -2.66
RFX4Q33E94 RNU6-258P-201ENST00000390884 101 ntBASIC-1.57□□□□□ -2.66
RFX4Q33E94 RNU6-406P-201ENST00000516470 107 ntBASIC-1.57□□□□□ -2.66
RFX4Q33E94 MIR548W-201ENST00000581970 74 ntBASIC-1.57□□□□□ -2.66
RFX4Q33E94 MIR3170-201ENST00000582699 77 ntBASIC-1.57□□□□□ -2.66
RFX4Q33E94 MIR4712-201ENST00000583750 82 ntBASIC-1.57□□□□□ -2.66
RFX4Q33E94 MIR1245B-201ENST00000636115 69 ntBASIC-1.57□□□□□ -2.66
RFX4Q33E94 SNORD115-31-201ENST00000365318 82 ntBASIC-1.58□□□□□ -2.66
RFX4Q33E94 SNORA41B-201ENST00000384785 128 ntBASIC-1.58□□□□□ -2.66
RFX4Q33E94 MIR496-201ENST00000385226 102 ntBASIC-1.58□□□□□ -2.66
RFX4Q33E94 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.58□□□□□ -2.66
RFX4Q33E94 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.59□□□□□ -2.66
RFX4Q33E94 RNU6-242P-201ENST00000384359 107 ntBASIC-1.59□□□□□ -2.66
RFX4Q33E94 MT-TM-201ENST00000387377 68 ntBASIC-1.59□□□□□ -2.66
RFX4Q33E94 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.59□□□□□ -2.66
RFX4Q33E94 MIR4748-201ENST00000578076 82 ntBASIC-1.59□□□□□ -2.66
RFX4Q33E94 RNY4P30-201ENST00000410216 95 ntBASIC-1.6□□□□□ -2.67
RFX4Q33E94 MIR4723-201ENST00000585070 81 ntBASIC-1.6□□□□□ -2.67
RFX4Q33E94 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.6□□□□□ -2.67
RFX4Q33E94 SNORD1B-201ENST00000363091 84 ntBASIC-1.61□□□□□ -2.67
RFX4Q33E94 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.61□□□□□ -2.67
RFX4Q33E94 SNORD116-24-201ENST00000384549 92 ntBASIC-1.62□□□□□ -2.67
RFX4Q33E94 snoU13.10-201ENST00000459301 103 ntBASIC-1.62□□□□□ -2.67
RFX4Q33E94 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.62□□□□□ -2.67
RFX4Q33E94 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.62□□□□□ -2.67
RFX4Q33E94 MIR466-201ENST00000580653 84 ntBASIC-1.63□□□□□ -2.67
RFX4Q33E94 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.63□□□□□ -2.67
RFX4Q33E94 AC013734.1-201ENST00000619329 111 ntBASIC-1.63□□□□□ -2.67
RFX4Q33E94 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.63□□□□□ -2.67
RFX4Q33E94 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.64□□□□□ -2.67
RFX4Q33E94 MIR1207-201ENST00000408249 87 ntBASIC-1.64□□□□□ -2.67
RFX4Q33E94 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.64□□□□□ -2.67
RFX4Q33E94 MIR494-201ENST00000349529 81 ntBASIC-1.65□□□□□ -2.67
RFX4Q33E94 MIR450A2-201ENST00000385022 100 ntBASIC-1.65□□□□□ -2.67
RFX4Q33E94 RNU6-542P-201ENST00000516405 103 ntBASIC-1.65□□□□□ -2.67
RFX4Q33E94 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.65□□□□□ -2.67
RFX4Q33E94 RNU6-153P-201ENST00000364422 104 ntBASIC-1.66□□□□□ -2.68
RFX4Q33E94 RNU6-119P-201ENST00000364882 107 ntBASIC-1.66□□□□□ -2.68
RFX4Q33E94 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.66□□□□□ -2.68
RFX4Q33E94 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.66□□□□□ -2.68
RFX4Q33E94 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.66□□□□□ -2.68
RFX4Q33E94 RNU7-151P-201ENST00000516930 53 ntBASIC-1.66□□□□□ -2.68
RFX4Q33E94 AC005520.4-201ENST00000604337 90 ntBASIC-1.66□□□□□ -2.68
RFX4Q33E94 RNU6-172P-201ENST00000411000 93 ntBASIC-1.67□□□□□ -2.68
RFX4Q33E94 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.67□□□□□ -2.68
RFX4Q33E94 MIR3134-201ENST00000579433 74 ntBASIC-1.68□□□□□ -2.68
RFX4Q33E94 FTX_4.1-201ENST00000616291 147 ntBASIC-1.68□□□□□ -2.68
RFX4Q33E94 SNORA27.2-201ENST00000363365 126 ntBASIC-1.69□□□□□ -2.68
RFX4Q33E94 MIR4666B-201ENST00000578142 81 ntBASIC-1.69□□□□□ -2.68
RFX4Q33E94 RNU6-92P-201ENST00000605893 104 ntBASIC-1.69□□□□□ -2.68
RFX4Q33E94 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.69□□□□□ -2.68
RFX4Q33E94 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.7□□□□□ -2.68
RFX4Q33E94 SNORD63.2-201ENST00000516303 64 ntBASIC-1.7□□□□□ -2.68
RFX4Q33E94 RNU6-294P-201ENST00000364999 102 ntBASIC-1.71□□□□□ -2.68
RFX4Q33E94 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.71□□□□□ -2.68
RFX4Q33E94 RNU6-411P-201ENST00000384451 107 ntBASIC-1.71□□□□□ -2.68
RFX4Q33E94 MIR579-201ENST00000385221 98 ntBASIC-1.71□□□□□ -2.68
RFX4Q33E94 RNU6-687P-201ENST00000516443 89 ntBASIC-1.71□□□□□ -2.68
RFX4Q33E94 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.72□□□□□ -2.68
RFX4Q33E94 RNU6-787P-201ENST00000384032 107 ntBASIC-1.72□□□□□ -2.68
RFX4Q33E94 SNORD54-201ENST00000459159 67 ntBASIC-1.72□□□□□ -2.68
RFX4Q33E94 AC097484.2-201ENST00000509147 251 ntBASIC-1.72□□□□□ -2.68
RFX4Q33E94 U2.22-201ENST00000636441 106 ntBASIC-1.72□□□□□ -2.68
RFX4Q33E94 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.73□□□□□ -2.69
RFX4Q33E94 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.73□□□□□ -2.69
RFX4Q33E94 MIR7978-201ENST00000636158 59 ntBASIC-1.73□□□□□ -2.69
RFX4Q33E94 RNU6-669P-201ENST00000365575 107 ntBASIC-1.74□□□□□ -2.69
RFX4Q33E94 RNU6-820P-201ENST00000384273 107 ntBASIC-1.74□□□□□ -2.69
RFX4Q33E94 U6.97-201ENST00000636904 101 ntBASIC-1.74□□□□□ -2.69
RFX4Q33E94 MIR581-201ENST00000384895 96 ntBASIC-1.75□□□□□ -2.69
RFX4Q33E94 U7.4-201ENST00000614961 63 ntBASIC-1.75□□□□□ -2.69
RFX4Q33E94 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.76□□□□□ -2.69
RFX4Q33E94 MIR125B1-201ENST00000385236 88 ntBASIC-1.76□□□□□ -2.69
RFX4Q33E94 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.76□□□□□ -2.69
RFX4Q33E94 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.76□□□□□ -2.69
RFX4Q33E94 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.76□□□□□ -2.69
RFX4Q33E94 RNU7-160P-201ENST00000516660 62 ntBASIC-1.76□□□□□ -2.69
RFX4Q33E94 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.76□□□□□ -2.69
RFX4Q33E94 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.76□□□□□ -2.69
RFX4Q33E94 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.76□□□□□ -2.69
RFX4Q33E94 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.76□□□□□ -2.69
RFX4Q33E94 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.77□□□□□ -2.69
RFX4Q33E94 RNU6-141P-201ENST00000410499 105 ntBASIC-1.77□□□□□ -2.69
RFX4Q33E94 RNY3P8-201ENST00000411366 126 ntBASIC-1.77□□□□□ -2.69
RFX4Q33E94 RNU6-523P-201ENST00000516304 54 ntBASIC-1.78□□□□□ -2.69
RFX4Q33E94 MIR7110-201ENST00000612638 86 ntBASIC-1.78□□□□□ -2.69
RFX4Q33E94 RNA5SP93-201ENST00000362525 114 ntBASIC-1.79□□□□□ -2.7
RFX4Q33E94 SNORD18C-201ENST00000362704 69 ntBASIC-1.79□□□□□ -2.7
RFX4Q33E94 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.79□□□□□ -2.7
RFX4Q33E94 SNORD60.1-201ENST00000362451 73 ntBASIC-1.8□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 211.8 ms