Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.28□□□□□ -2.77
SCN1BQ07699 RNU6-1241P-201ENST00000384536 107 ntBASIC-2.29□□□□□ -2.78
SCN1BQ07699 MIR4712-201ENST00000583750 82 ntBASIC-2.29□□□□□ -2.78
SCN1BQ07699 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.29□□□□□ -2.78
SCN1BQ07699 MIR548AM-201ENST00000584298 74 ntBASIC-2.29□□□□□ -2.78
SCN1BQ07699 RNU6-841P-201ENST00000383872 107 ntBASIC-2.3□□□□□ -2.78
SCN1BQ07699 MT-TM-201ENST00000387377 68 ntBASIC-2.3□□□□□ -2.78
SCN1BQ07699 RNU7-171P-201ENST00000459581 62 ntBASIC-2.3□□□□□ -2.78
SCN1BQ07699 MIR3123-201ENST00000583417 75 ntBASIC-2.3□□□□□ -2.78
SCN1BQ07699 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.31□□□□□ -2.78
SCN1BQ07699 MIR154-201ENST00000385243 84 ntBASIC-2.31□□□□□ -2.78
SCN1BQ07699 RNU6-1111P-201ENST00000391118 107 ntBASIC-2.31□□□□□ -2.78
SCN1BQ07699 RNY4P30-201ENST00000410216 95 ntBASIC-2.31□□□□□ -2.78
SCN1BQ07699 RNU6-70P-201ENST00000516438 60 ntBASIC-2.31□□□□□ -2.78
SCN1BQ07699 RNU6-895P-201ENST00000384125 103 ntBASIC-2.32□□□□□ -2.78
SCN1BQ07699 SNORA41B-201ENST00000384785 128 ntBASIC-2.32□□□□□ -2.78
SCN1BQ07699 MIR548AA1-201ENST00000384971 97 ntBASIC-2.32□□□□□ -2.78
SCN1BQ07699 MIR548AI-201ENST00000579940 88 ntBASIC-2.32□□□□□ -2.78
SCN1BQ07699 RNU6-1267P-201ENST00000410747 107 ntBASIC-2.33□□□□□ -2.78
SCN1BQ07699 MIR1245B-201ENST00000636115 69 ntBASIC-2.33□□□□□ -2.78
SCN1BQ07699 RNU6-406P-201ENST00000516470 107 ntBASIC-2.34□□□□□ -2.78
SCN1BQ07699 RNA5SP405-201ENST00000363059 114 ntBASIC-2.35□□□□□ -2.79
SCN1BQ07699 SNORD1B-201ENST00000363091 84 ntBASIC-2.35□□□□□ -2.79
SCN1BQ07699 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.35□□□□□ -2.79
SCN1BQ07699 RNU4-88P-201ENST00000411220 86 ntBASIC-2.35□□□□□ -2.79
SCN1BQ07699 MIR3170-201ENST00000582699 77 ntBASIC-2.35□□□□□ -2.79
SCN1BQ07699 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.36□□□□□ -2.79
SCN1BQ07699 MIR494-201ENST00000349529 81 ntBASIC-2.38□□□□□ -2.79
SCN1BQ07699 RNU6-247P-201ENST00000362636 107 ntBASIC-2.38□□□□□ -2.79
SCN1BQ07699 Y_RNA.291-201ENST00000364886 113 ntBASIC-2.38□□□□□ -2.79
SCN1BQ07699 RNU6-242P-201ENST00000384359 107 ntBASIC-2.38□□□□□ -2.79
SCN1BQ07699 SNORD116-24-201ENST00000384549 92 ntBASIC-2.4□□□□□ -2.79
SCN1BQ07699 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.4□□□□□ -2.79
SCN1BQ07699 MIR23C-201ENST00000579846 100 ntBASIC-2.4□□□□□ -2.79
SCN1BQ07699 RNU6-194P-201ENST00000363862 105 ntBASIC-2.41□□□□□ -2.8
SCN1BQ07699 RNU6-995P-201ENST00000391244 107 ntBASIC-2.41□□□□□ -2.8
SCN1BQ07699 AC120024.2-201ENST00000576526 175 ntBASIC-2.41□□□□□ -2.8
SCN1BQ07699 RNU6-563P-201ENST00000364872 108 ntBASIC-2.42□□□□□ -2.8
SCN1BQ07699 Y_RNA.788-201ENST00000622394 112 ntBASIC-2.42□□□□□ -2.8
SCN1BQ07699 Y_RNA.94-201ENST00000363068 106 ntBASIC-2.44□□□□□ -2.8
SCN1BQ07699 SNORD115-31-201ENST00000365318 82 ntBASIC-2.44□□□□□ -2.8
SCN1BQ07699 RNU6-1276P-201ENST00000365372 104 ntBASIC-2.44□□□□□ -2.8
SCN1BQ07699 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-2.44□□□□□ -2.8
SCN1BQ07699 MIR450A2-201ENST00000385022 100 ntBASIC-2.45□□□□□ -2.8
SCN1BQ07699 RNU6-258P-201ENST00000390884 101 ntBASIC-2.45□□□□□ -2.8
SCN1BQ07699 Y_RNA.699-201ENST00000516803 93 ntBASIC-2.46□□□□□ -2.8
SCN1BQ07699 MIR3134-201ENST00000579433 74 ntBASIC-2.46□□□□□ -2.8
SCN1BQ07699 RNU6-153P-201ENST00000364422 104 ntBASIC-2.47□□□□□ -2.8
SCN1BQ07699 RNU7-151P-201ENST00000516930 53 ntBASIC-2.47□□□□□ -2.8
SCN1BQ07699 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.48□□□□□ -2.81
SCN1BQ07699 MIR579-201ENST00000385221 98 ntBASIC-2.48□□□□□ -2.81
SCN1BQ07699 RNU6-172P-201ENST00000411000 93 ntBASIC-2.48□□□□□ -2.81
SCN1BQ07699 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-2.48□□□□□ -2.81
SCN1BQ07699 RNU6-1191P-201ENST00000516799 107 ntBASIC-2.48□□□□□ -2.81
SCN1BQ07699 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.48□□□□□ -2.81
SCN1BQ07699 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.48□□□□□ -2.81
SCN1BQ07699 RNU6-294P-201ENST00000364999 102 ntBASIC-2.49□□□□□ -2.81
SCN1BQ07699 Y_RNA.694-201ENST00000516677 117 ntBASIC-2.49□□□□□ -2.81
SCN1BQ07699 MIR4666B-201ENST00000578142 81 ntBASIC-2.49□□□□□ -2.81
SCN1BQ07699 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.49□□□□□ -2.81
SCN1BQ07699 RNU6-542P-201ENST00000516405 103 ntBASIC-2.52□□□□□ -2.81
SCN1BQ07699 RNU6-687P-201ENST00000516443 89 ntBASIC-2.52□□□□□ -2.81
SCN1BQ07699 MIR4748-201ENST00000578076 82 ntBASIC-2.52□□□□□ -2.81
SCN1BQ07699 SNORD63.2-201ENST00000516303 64 ntBASIC-2.53□□□□□ -2.81
SCN1BQ07699 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-2.53□□□□□ -2.81
SCN1BQ07699 MIR466-201ENST00000580653 84 ntBASIC-2.53□□□□□ -2.81
SCN1BQ07699 MIR548W-201ENST00000581970 74 ntBASIC-2.54□□□□□ -2.82
SCN1BQ07699 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.55□□□□□ -2.82
SCN1BQ07699 U2.22-201ENST00000636441 106 ntBASIC-2.55□□□□□ -2.82
SCN1BQ07699 RNU6-92P-201ENST00000605893 104 ntBASIC-2.56□□□□□ -2.82
SCN1BQ07699 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.56□□□□□ -2.82
SCN1BQ07699 MTRNR2L9-201ENST00000622562 75 ntBASIC-2.56□□□□□ -2.82
SCN1BQ07699 MIR7978-201ENST00000636158 59 ntBASIC-2.56□□□□□ -2.82
SCN1BQ07699 RNU6-411P-201ENST00000384451 107 ntBASIC-2.57□□□□□ -2.82
SCN1BQ07699 Y_RNA.186-201ENST00000363899 92 ntBASIC-2.58□□□□□ -2.82
SCN1BQ07699 RNU6-669P-201ENST00000365575 107 ntBASIC-2.58□□□□□ -2.82
SCN1BQ07699 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-2.58□□□□□ -2.82
SCN1BQ07699 snoU13.10-201ENST00000459301 103 ntBASIC-2.58□□□□□ -2.82
SCN1BQ07699 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-2.6□□□□□ -2.83
SCN1BQ07699 SNORA27.2-201ENST00000363365 126 ntBASIC-2.61□□□□□ -2.83
SCN1BQ07699 RNU6-787P-201ENST00000384032 107 ntBASIC-2.61□□□□□ -2.83
SCN1BQ07699 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.61□□□□□ -2.83
SCN1BQ07699 AC013734.1-201ENST00000619329 111 ntBASIC-2.61□□□□□ -2.83
SCN1BQ07699 RNU6-820P-201ENST00000384273 107 ntBASIC-2.62□□□□□ -2.83
SCN1BQ07699 RNU6-1015P-201ENST00000517121 99 ntBASIC-2.62□□□□□ -2.83
SCN1BQ07699 MIR125B1-201ENST00000385236 88 ntBASIC-2.63□□□□□ -2.83
SCN1BQ07699 MIR5582-201ENST00000579697 68 ntBASIC-2.63□□□□□ -2.83
SCN1BQ07699 FTX_4.1-201ENST00000616291 147 ntBASIC-2.64□□□□□ -2.83
SCN1BQ07699 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.65□□□□□ -2.83
SCN1BQ07699 U7.4-201ENST00000614961 63 ntBASIC-2.65□□□□□ -2.83
SCN1BQ07699 SNORD60.1-201ENST00000362451 73 ntBASIC-2.66□□□□□ -2.84
SCN1BQ07699 Y_RNA.369-201ENST00000365568 117 ntBASIC-2.66□□□□□ -2.84
SCN1BQ07699 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.66□□□□□ -2.84
SCN1BQ07699 RNU6-523P-201ENST00000516304 54 ntBASIC-2.66□□□□□ -2.84
SCN1BQ07699 Y_RNA.443-201ENST00000384135 111 ntBASIC-2.67□□□□□ -2.84
SCN1BQ07699 AC062037.1-201ENST00000605302 128 ntBASIC-2.67□□□□□ -2.84
SCN1BQ07699 AC005520.4-201ENST00000604337 90 ntBASIC-2.68□□□□□ -2.84
SCN1BQ07699 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.69□□□□□ -2.84
SCN1BQ07699 U6.97-201ENST00000636904 101 ntBASIC-2.69□□□□□ -2.84
SCN1BQ07699 Y_RNA.321-201ENST00000365149 102 ntBASIC-2.7□□□□□ -2.84
Retrieved 100 of 98,524 protein–RNA pairs in 220.1 ms