Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 Y_RNA.703-201ENST00000516846 111 ntBASIC-1.52□□□□□ -2.65
IRX3P78415 RNU6-303P-201ENST00000517091 106 ntBASIC-1.52□□□□□ -2.65
IRX3P78415 MIR4668-201ENST00000582284 70 ntBASIC-1.52□□□□□ -2.65
IRX3P78415 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.52□□□□□ -2.65
IRX3P78415 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.52□□□□□ -2.65
IRX3P78415 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.52□□□□□ -2.65
IRX3P78415 MIR429-201ENST00000362106 83 ntBASIC-1.53□□□□□ -2.65
IRX3P78415 RNU6-834P-201ENST00000362367 110 ntBASIC-1.53□□□□□ -2.65
IRX3P78415 SNORD115-37-201ENST00000363768 82 ntBASIC-1.53□□□□□ -2.65
IRX3P78415 RNU6-668P-201ENST00000364180 107 ntBASIC-1.53□□□□□ -2.65
IRX3P78415 RNU6-119P-201ENST00000364882 107 ntBASIC-1.53□□□□□ -2.65
IRX3P78415 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.53□□□□□ -2.65
IRX3P78415 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.53□□□□□ -2.65
IRX3P78415 SNX3P1Y-201ENST00000615757 176 ntBASIC-1.53□□□□□ -2.65
IRX3P78415 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.54□□□□□ -2.66
IRX3P78415 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.54□□□□□ -2.66
IRX3P78415 MIR548BB-201ENST00000626714 66 ntBASIC-1.54□□□□□ -2.66
IRX3P78415 MIR1207-201ENST00000408249 87 ntBASIC-1.55□□□□□ -2.66
IRX3P78415 AC093729.1-201ENST00000513074 128 ntBASIC-1.55□□□□□ -2.66
IRX3P78415 MIR5693-201ENST00000577722 73 ntBASIC-1.55□□□□□ -2.66
IRX3P78415 RNU6-1169P-201ENST00000363537 103 ntBASIC-1.56□□□□□ -2.66
IRX3P78415 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.56□□□□□ -2.66
IRX3P78415 AC090425.1-201ENST00000610007 140 ntBASIC-1.56□□□□□ -2.66
IRX3P78415 RNU6-686P-201ENST00000364839 107 ntBASIC-1.57□□□□□ -2.66
IRX3P78415 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.57□□□□□ -2.66
IRX3P78415 SNORA17.4-201ENST00000391287 132 ntBASIC-1.57□□□□□ -2.66
IRX3P78415 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.57□□□□□ -2.66
IRX3P78415 SNORD54-201ENST00000459159 67 ntBASIC-1.57□□□□□ -2.66
IRX3P78415 RNY4P9-201ENST00000363194 97 ntBASIC-1.58□□□□□ -2.66
IRX3P78415 RNY1P1-201ENST00000364372 112 ntBASIC-1.58□□□□□ -2.66
IRX3P78415 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.58□□□□□ -2.66
IRX3P78415 RNU6-742P-201ENST00000365289 107 ntBASIC-1.58□□□□□ -2.66
IRX3P78415 RNU6-800P-201ENST00000384473 103 ntBASIC-1.58□□□□□ -2.66
IRX3P78415 RNU6-959P-201ENST00000384671 107 ntBASIC-1.58□□□□□ -2.66
IRX3P78415 SNORD116.2-201ENST00000391251 93 ntBASIC-1.58□□□□□ -2.66
IRX3P78415 Y_RNA.134-201ENST00000363435 105 ntBASIC-1.59□□□□□ -2.66
IRX3P78415 RNA5SP215-201ENST00000363440 122 ntBASIC-1.59□□□□□ -2.66
IRX3P78415 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.59□□□□□ -2.66
IRX3P78415 MTND4LP1-201ENST00000446263 157 ntBASIC-1.59□□□□□ -2.66
IRX3P78415 RNU6-557P-201ENST00000516842 110 ntBASIC-1.59□□□□□ -2.66
IRX3P78415 SNORA40.16-201ENST00000517238 121 ntBASIC-1.59□□□□□ -2.66
IRX3P78415 SNORD60.1-201ENST00000362451 73 ntBASIC-1.6□□□□□ -2.67
IRX3P78415 RNU6-828P-201ENST00000364876 107 ntBASIC-1.6□□□□□ -2.67
IRX3P78415 RNU6-231P-201ENST00000517122 103 ntBASIC-1.6□□□□□ -2.67
IRX3P78415 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.6□□□□□ -2.67
IRX3P78415 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.61□□□□□ -2.67
IRX3P78415 Y_RNA.519-201ENST00000384553 102 ntBASIC-1.61□□□□□ -2.67
IRX3P78415 MIR4426-201ENST00000640330 63 ntBASIC-1.61□□□□□ -2.67
IRX3P78415 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.62□□□□□ -2.67
IRX3P78415 RNU6-361P-201ENST00000364454 107 ntBASIC-1.62□□□□□ -2.67
IRX3P78415 MIR488-201ENST00000365739 83 ntBASIC-1.62□□□□□ -2.67
IRX3P78415 SNORD60-201ENST00000383903 83 ntBASIC-1.62□□□□□ -2.67
IRX3P78415 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.62□□□□□ -2.67
IRX3P78415 RNU6-129P-201ENST00000391022 107 ntBASIC-1.62□□□□□ -2.67
IRX3P78415 MIR548AI-201ENST00000579940 88 ntBASIC-1.62□□□□□ -2.67
IRX3P78415 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.63□□□□□ -2.67
IRX3P78415 RNU6-1056P-201ENST00000383996 107 ntBASIC-1.63□□□□□ -2.67
IRX3P78415 MIR7110-201ENST00000612638 86 ntBASIC-1.63□□□□□ -2.67
IRX3P78415 SNORA63.4-201ENST00000362763 126 ntBASIC-1.64□□□□□ -2.67
IRX3P78415 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.64□□□□□ -2.67
IRX3P78415 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.64□□□□□ -2.67
IRX3P78415 MIR3133-201ENST00000583157 78 ntBASIC-1.64□□□□□ -2.67
IRX3P78415 AC006160.2-201ENST00000637708 154 ntBASIC-1.64□□□□□ -2.67
IRX3P78415 MIR450A1-201ENST00000362262 91 ntBASIC-1.65□□□□□ -2.67
IRX3P78415 RNU6-755P-201ENST00000364400 103 ntBASIC-1.65□□□□□ -2.67
IRX3P78415 RNU6-81P-201ENST00000365608 104 ntBASIC-1.65□□□□□ -2.67
IRX3P78415 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.65□□□□□ -2.67
IRX3P78415 RNU6-209P-201ENST00000384118 107 ntBASIC-1.65□□□□□ -2.67
IRX3P78415 RNU6-789P-201ENST00000517105 102 ntBASIC-1.65□□□□□ -2.67
IRX3P78415 RNU6-590P-201ENST00000365039 107 ntBASIC-1.66□□□□□ -2.68
IRX3P78415 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.66□□□□□ -2.68
IRX3P78415 MIR3134-201ENST00000579433 74 ntBASIC-1.66□□□□□ -2.68
IRX3P78415 AL731768.1-201ENST00000603124 139 ntBASIC-1.66□□□□□ -2.68
IRX3P78415 RNU6-92P-201ENST00000605893 104 ntBASIC-1.66□□□□□ -2.68
IRX3P78415 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.67□□□□□ -2.68
IRX3P78415 RNU6-589P-201ENST00000516485 107 ntBASIC-1.67□□□□□ -2.68
IRX3P78415 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.68□□□□□ -2.68
IRX3P78415 SNORA40B-201ENST00000385573 128 ntBASIC-1.68□□□□□ -2.68
IRX3P78415 SNORD115-45-201ENST00000391078 81 ntBASIC-1.68□□□□□ -2.68
IRX3P78415 RNU6-300P-201ENST00000459080 104 ntBASIC-1.68□□□□□ -2.68
IRX3P78415 MIR8053-201ENST00000613344 75 ntBASIC-1.68□□□□□ -2.68
IRX3P78415 MALAT1.1-201ENST00000618249 95 ntBASIC-1.68□□□□□ -2.68
IRX3P78415 RNU6-854P-201ENST00000364036 107 ntBASIC-1.69□□□□□ -2.68
IRX3P78415 RNU6-737P-201ENST00000365370 107 ntBASIC-1.69□□□□□ -2.68
IRX3P78415 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.69□□□□□ -2.68
IRX3P78415 SNORD116-22-201ENST00000384430 92 ntBASIC-1.69□□□□□ -2.68
IRX3P78415 RNU6-70P-201ENST00000516438 60 ntBASIC-1.69□□□□□ -2.68
IRX3P78415 RNU7-160P-201ENST00000516660 62 ntBASIC-1.69□□□□□ -2.68
IRX3P78415 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.69□□□□□ -2.68
IRX3P78415 MIRLET7A3-201ENST00000362116 74 ntBASIC-1.7□□□□□ -2.68
IRX3P78415 RNY4P25-201ENST00000459254 96 ntBASIC-1.7□□□□□ -2.68
IRX3P78415 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.71□□□□□ -2.68
IRX3P78415 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.71□□□□□ -2.68
IRX3P78415 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.71□□□□□ -2.68
IRX3P78415 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.71□□□□□ -2.68
IRX3P78415 Y_RNA.652-201ENST00000458902 102 ntBASIC-1.71□□□□□ -2.68
IRX3P78415 RNA5SP173-201ENST00000364857 136 ntBASIC-1.72□□□□□ -2.68
IRX3P78415 MIR154-201ENST00000385243 84 ntBASIC-1.72□□□□□ -2.68
IRX3P78415 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.72□□□□□ -2.68
IRX3P78415 AL451105.1-201ENST00000450005 189 ntBASIC-1.72□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 309 ms