Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 MIR520D-201ENST00000385002 87 ntBASIC-0.06□□□□□ -2.42
YBX1P67809 AL353691.2-201ENST00000443795 59 ntBASIC-0.06□□□□□ -2.42
YBX1P67809 SNORD4A-201ENST00000459174 72 ntBASIC-0.06□□□□□ -2.42
YBX1P67809 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.07□□□□□ -2.42
YBX1P67809 SNORD75.1-201ENST00000408373 60 ntBASIC-0.07□□□□□ -2.42
YBX1P67809 MIR548F3-201ENST00000408509 87 ntBASIC-0.07□□□□□ -2.42
YBX1P67809 RNA5SP169-201ENST00000517268 117 ntBASIC-0.07□□□□□ -2.42
YBX1P67809 AP002795.1-201ENST00000534879 84 ntBASIC-0.07□□□□□ -2.42
YBX1P67809 MIR3179-1-201ENST00000578940 84 ntBASIC-0.07□□□□□ -2.42
YBX1P67809 MIR3179-2-201ENST00000579107 84 ntBASIC-0.07□□□□□ -2.42
YBX1P67809 MIR3179-3-201ENST00000579566 84 ntBASIC-0.07□□□□□ -2.42
YBX1P67809 MIR3179-4-201ENST00000617599 84 ntBASIC-0.07□□□□□ -2.42
YBX1P67809 MIR5683-201ENST00000636514 76 ntBASIC-0.07□□□□□ -2.42
YBX1P67809 SNORD115-33-201ENST00000363723 82 ntBASIC-0.08□□□□□ -2.42
YBX1P67809 RNU6-258P-201ENST00000390884 101 ntBASIC-0.08□□□□□ -2.42
YBX1P67809 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.08□□□□□ -2.42
YBX1P67809 AP000533.3-201ENST00000447704 118 ntBASIC-0.08□□□□□ -2.42
YBX1P67809 SNORD114-11-201ENST00000363738 75 ntBASIC-0.09□□□□□ -2.42
YBX1P67809 SNORD114-17-201ENST00000364699 75 ntBASIC-0.09□□□□□ -2.42
YBX1P67809 MIR1468-201ENST00000410600 86 ntBASIC-0.09□□□□□ -2.42
YBX1P67809 RNU6-530P-201ENST00000391180 107 ntBASIC-0.1□□□□□ -2.43
YBX1P67809 MIR4723-201ENST00000585070 81 ntBASIC-0.1□□□□□ -2.43
YBX1P67809 RNA5SP451-201ENST00000410588 110 ntBASIC-0.11□□□□□ -2.43
YBX1P67809 SNORA13-201ENST00000458790 133 ntBASIC-0.11□□□□□ -2.43
YBX1P67809 SNORA27.2-201ENST00000363365 126 ntBASIC-0.12□□□□□ -2.43
YBX1P67809 SNORD114-28-201ENST00000363610 72 ntBASIC-0.12□□□□□ -2.43
YBX1P67809 RNA5SP300-201ENST00000391197 107 ntBASIC-0.12□□□□□ -2.43
YBX1P67809 MIR548AL-201ENST00000578416 97 ntBASIC-0.12□□□□□ -2.43
YBX1P67809 MIR224-201ENST00000384889 81 ntBASIC-0.13□□□□□ -2.43
YBX1P67809 MIR29B1-201ENST00000385015 81 ntBASIC-0.13□□□□□ -2.43
YBX1P67809 SNORA32.1-201ENST00000364514 115 ntBASIC-0.14□□□□□ -2.43
YBX1P67809 MIR545-201ENST00000385085 106 ntBASIC-0.14□□□□□ -2.43
YBX1P67809 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.15□□□□□ -2.43
YBX1P67809 RNU6-721P-201ENST00000410155 105 ntBASIC-0.15□□□□□ -2.43
YBX1P67809 SNX3P1X-201ENST00000414887 175 ntBASIC-0.16□□□□□ -2.44
YBX1P67809 MIR8064-201ENST00000612863 90 ntBASIC-0.16□□□□□ -2.44
YBX1P67809 RNU6-608P-201ENST00000383927 104 ntBASIC-0.17□□□□□ -2.44
YBX1P67809 RNY1P9-201ENST00000532431 109 ntBASIC-0.19□□□□□ -2.44
YBX1P67809 RNU6-1204P-201ENST00000363948 107 ntBASIC-0.2□□□□□ -2.44
YBX1P67809 RNU6-742P-201ENST00000365289 107 ntBASIC-0.2□□□□□ -2.44
YBX1P67809 MIR507-201ENST00000385234 94 ntBASIC-0.2□□□□□ -2.44
YBX1P67809 RPL35AP4-201ENST00000412007 102 ntBASIC-0.2□□□□□ -2.44
YBX1P67809 AC021146.6-201ENST00000514659 117 ntBASIC-0.21□□□□□ -2.44
YBX1P67809 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.21□□□□□ -2.44
YBX1P67809 MIR548AX-201ENST00000580117 73 ntBASIC-0.22□□□□□ -2.44
YBX1P67809 RNU6-986P-201ENST00000363133 102 ntBASIC-0.25□□□□□ -2.45
YBX1P67809 MIR4426-201ENST00000640330 63 ntBASIC-0.25□□□□□ -2.45
YBX1P67809 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.26□□□□□ -2.45
YBX1P67809 RNY3P8-201ENST00000411366 126 ntBASIC-0.26□□□□□ -2.45
YBX1P67809 Y_RNA.603-201ENST00000410571 108 ntBASIC-0.27□□□□□ -2.45
YBX1P67809 MIR4436A-201ENST00000585278 85 ntBASIC-0.27□□□□□ -2.45
YBX1P67809 MIR202-201ENST00000362219 110 ntBASIC-0.28□□□□□ -2.45
YBX1P67809 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.28□□□□□ -2.45
YBX1P67809 MIR196A2-201ENST00000385189 110 ntBASIC-0.28□□□□□ -2.45
YBX1P67809 SNORA3B-201ENST00000391305 131 ntBASIC-0.29□□□□□ -2.46
YBX1P67809 RNU6-320P-201ENST00000516511 106 ntBASIC-0.3□□□□□ -2.46
YBX1P67809 RNU6-361P-201ENST00000364454 107 ntBASIC-0.31□□□□□ -2.46
YBX1P67809 RNU6-1008P-201ENST00000384160 104 ntBASIC-0.32□□□□□ -2.46
YBX1P67809 RNU4-63P-201ENST00000411313 118 ntBASIC-0.32□□□□□ -2.46
YBX1P67809 SNORD126-201ENST00000459475 77 ntBASIC-0.32□□□□□ -2.46
YBX1P67809 RNU6-822P-201ENST00000362707 106 ntBASIC-0.33□□□□□ -2.46
YBX1P67809 RNA5SP275-201ENST00000363936 118 ntBASIC-0.33□□□□□ -2.46
YBX1P67809 SNORA17.4-201ENST00000391287 132 ntBASIC-0.33□□□□□ -2.46
YBX1P67809 RNU6-284P-201ENST00000411105 106 ntBASIC-0.34□□□□□ -2.46
YBX1P67809 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.34□□□□□ -2.46
YBX1P67809 RNU6-431P-201ENST00000383874 107 ntBASIC-0.35□□□□□ -2.47
YBX1P67809 AC090616.4-201ENST00000448026 115 ntBASIC-0.35□□□□□ -2.47
YBX1P67809 RNU6-300P-201ENST00000459080 104 ntBASIC-0.35□□□□□ -2.47
YBX1P67809 MIR23C-201ENST00000579846 100 ntBASIC-0.35□□□□□ -2.47
YBX1P67809 MIR4317-201ENST00000637586 65 ntBASIC-0.35□□□□□ -2.47
YBX1P67809 SNORD64-201ENST00000386683 67 ntBASIC-0.36□□□□□ -2.47
YBX1P67809 MIR548AZ-201ENST00000616567 95 ntBASIC-0.36□□□□□ -2.47
YBX1P67809 RNA5SP26-201ENST00000362406 119 ntBASIC-0.37□□□□□ -2.47
YBX1P67809 SNORD14C-201ENST00000365382 88 ntBASIC-0.37□□□□□ -2.47
YBX1P67809 SNORD60-201ENST00000383903 83 ntBASIC-0.37□□□□□ -2.47
YBX1P67809 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.37□□□□□ -2.47
YBX1P67809 MIR3681-201ENST00000580089 72 ntBASIC-0.37□□□□□ -2.47
YBX1P67809 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-0.37□□□□□ -2.47
YBX1P67809 SNORD114-14-201ENST00000362723 75 ntBASIC-0.38□□□□□ -2.47
YBX1P67809 MIR548H4-201ENST00000408689 111 ntBASIC-0.38□□□□□ -2.47
YBX1P67809 MIR147A-201ENST00000385079 72 ntBASIC-0.39□□□□□ -2.47
YBX1P67809 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.39□□□□□ -2.47
YBX1P67809 SNORD114-25-201ENST00000363742 72 ntBASIC-0.4□□□□□ -2.47
YBX1P67809 RNU6-1047P-201ENST00000364418 107 ntBASIC-0.4□□□□□ -2.47
YBX1P67809 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.41□□□□□ -2.48
YBX1P67809 RNU6-176P-201ENST00000517196 105 ntBASIC-0.41□□□□□ -2.48
YBX1P67809 MIR601-201ENST00000385256 79 ntBASIC-0.42□□□□□ -2.48
YBX1P67809 MT-TQ-201ENST00000387372 72 ntBASIC-0.43□□□□□ -2.48
YBX1P67809 AC120024.2-201ENST00000576526 175 ntBASIC-0.43□□□□□ -2.48
YBX1P67809 AC013734.1-201ENST00000619329 111 ntBASIC-0.43□□□□□ -2.48
YBX1P67809 SNORA32.3-201ENST00000384772 121 ntBASIC-0.44□□□□□ -2.48
YBX1P67809 AL500527.2-201ENST00000454105 95 ntBASIC-0.44□□□□□ -2.48
YBX1P67809 RNU6-1326P-201ENST00000391262 107 ntBASIC-0.45□□□□□ -2.48
YBX1P67809 RNU6-563P-201ENST00000364872 108 ntBASIC-0.46□□□□□ -2.48
YBX1P67809 U6.97-201ENST00000636904 101 ntBASIC-0.46□□□□□ -2.48
YBX1P67809 MIR382-201ENST00000637119 76 ntBASIC-0.46□□□□□ -2.48
YBX1P67809 MIR548N-201ENST00000408742 75 ntBASIC-0.47□□□□□ -2.48
YBX1P67809 RNU6-59P-201ENST00000384787 107 ntBASIC-0.48□□□□□ -2.49
YBX1P67809 snoU83B.1-201ENST00000517136 88 ntBASIC-0.48□□□□□ -2.49
YBX1P67809 MIR198-201ENST00000637333 62 ntBASIC-0.48□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 269.3 ms