Protein–RNA interactions for Protein: P49917

LIG4, DNA ligase 4, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4P49917 Y_RNA.139-201ENST00000363464 102 ntBASIC-0.9□□□□□ -2.55
LIG4P49917 RNU6-1111P-201ENST00000391118 107 ntBASIC-0.9□□□□□ -2.55
LIG4P49917 AC018880.2-201ENST00000414265 201 ntBASIC-0.9□□□□□ -2.55
LIG4P49917 SNORD63.2-201ENST00000516303 64 ntBASIC-0.9□□□□□ -2.55
LIG4P49917 RNU6-231P-201ENST00000517122 103 ntBASIC-0.9□□□□□ -2.55
LIG4P49917 RNU6-706P-201ENST00000517229 104 ntBASIC-0.9□□□□□ -2.55
LIG4P49917 MIR5591-201ENST00000578248 65 ntBASIC-0.9□□□□□ -2.55
LIG4P49917 MIR3202-2-201ENST00000635980 79 ntBASIC-0.9□□□□□ -2.55
LIG4P49917 Y_RNA.69-201ENST00000362885 109 ntBASIC-0.91□□□□□ -2.56
LIG4P49917 RNA5SP192-201ENST00000364404 120 ntBASIC-0.91□□□□□ -2.56
LIG4P49917 MIR581-201ENST00000384895 96 ntBASIC-0.91□□□□□ -2.56
LIG4P49917 SNORA40.16-201ENST00000517238 121 ntBASIC-0.91□□□□□ -2.56
LIG4P49917 Y_RNA.43-201ENST00000362670 111 ntBASIC-0.92□□□□□ -2.56
LIG4P49917 SNORA27.2-201ENST00000363365 126 ntBASIC-0.92□□□□□ -2.56
LIG4P49917 RNU6-226P-201ENST00000363778 107 ntBASIC-0.92□□□□□ -2.56
LIG4P49917 RNU6-810P-201ENST00000364001 107 ntBASIC-0.92□□□□□ -2.56
LIG4P49917 MIR487B-201ENST00000385021 84 ntBASIC-0.92□□□□□ -2.56
LIG4P49917 SNORD78.1-201ENST00000390866 65 ntBASIC-0.92□□□□□ -2.56
LIG4P49917 SNORA26.2-201ENST00000390922 122 ntBASIC-0.92□□□□□ -2.56
LIG4P49917 RNY3P8-201ENST00000411366 126 ntBASIC-0.92□□□□□ -2.56
LIG4P49917 RNU6-122P-201ENST00000516818 107 ntBASIC-0.92□□□□□ -2.56
LIG4P49917 MIR4679-1-201ENST00000637619 75 ntBASIC-0.92□□□□□ -2.56
LIG4P49917 SNORA25.5-201ENST00000363782 126 ntBASIC-0.93□□□□□ -2.56
LIG4P49917 Y_RNA.386-201ENST00000383913 105 ntBASIC-0.93□□□□□ -2.56
LIG4P49917 RNU6-400P-201ENST00000391173 106 ntBASIC-0.93□□□□□ -2.56
LIG4P49917 Y_RNA.678-201ENST00000516408 96 ntBASIC-0.93□□□□□ -2.56
LIG4P49917 SNORA25.4-201ENST00000363666 124 ntBASIC-0.94□□□□□ -2.56
LIG4P49917 RNU6-10P-201ENST00000384036 107 ntBASIC-0.94□□□□□ -2.56
LIG4P49917 Y_RNA.449-201ENST00000384187 102 ntBASIC-0.94□□□□□ -2.56
LIG4P49917 Y_RNA.545-201ENST00000384652 105 ntBASIC-0.94□□□□□ -2.56
LIG4P49917 Y_RNA.699-201ENST00000516803 93 ntBASIC-0.94□□□□□ -2.56
LIG4P49917 MIR4770-201ENST00000579149 58 ntBASIC-0.94□□□□□ -2.56
LIG4P49917 MIR4511-201ENST00000582784 87 ntBASIC-0.94□□□□□ -2.56
LIG4P49917 MIR7110-201ENST00000612638 86 ntBASIC-0.94□□□□□ -2.56
LIG4P49917 U6.111-201ENST00000636093 83 ntBASIC-0.94□□□□□ -2.56
LIG4P49917 Y_RNA.175-201ENST00000363794 111 ntBASIC-0.95□□□□□ -2.56
LIG4P49917 HLA-S-202ENST00000425174 53 ntBASIC-0.95□□□□□ -2.56
LIG4P49917 RNU7-160P-201ENST00000516660 62 ntBASIC-0.95□□□□□ -2.56
LIG4P49917 MIR23C-201ENST00000579846 100 ntBASIC-0.95□□□□□ -2.56
LIG4P49917 RNU6-247P-201ENST00000362636 107 ntBASIC-0.96□□□□□ -2.56
LIG4P49917 RNU6-695P-201ENST00000391157 104 ntBASIC-0.96□□□□□ -2.56
LIG4P49917 RNU6-995P-201ENST00000391244 107 ntBASIC-0.96□□□□□ -2.56
LIG4P49917 RNA5SP266-201ENST00000410273 108 ntBASIC-0.96□□□□□ -2.56
LIG4P49917 MIR1468-201ENST00000410600 86 ntBASIC-0.96□□□□□ -2.56
LIG4P49917 AL627230.5-201ENST00000619807 58 ntBASIC-0.96□□□□□ -2.56
LIG4P49917 Y_RNA.103-201ENST00000363171 102 ntBASIC-0.97□□□□□ -2.56
LIG4P49917 SNORA40B-201ENST00000385573 128 ntBASIC-0.97□□□□□ -2.56
LIG4P49917 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-0.97□□□□□ -2.56
LIG4P49917 Y_RNA.781-201ENST00000620301 103 ntBASIC-0.97□□□□□ -2.56
LIG4P49917 SNORD30.1-201ENST00000391309 70 ntBASIC-0.98□□□□□ -2.57
LIG4P49917 RNU6-1206P-201ENST00000516339 103 ntBASIC-0.98□□□□□ -2.57
LIG4P49917 MIR3123-201ENST00000583417 75 ntBASIC-0.98□□□□□ -2.57
LIG4P49917 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.99□□□□□ -2.57
LIG4P49917 Y_RNA.565-201ENST00000384719 101 ntBASIC-0.99□□□□□ -2.57
LIG4P49917 SNORD116.2-201ENST00000391251 93 ntBASIC-0.99□□□□□ -2.57
LIG4P49917 MIR1302-4-201ENST00000408701 150 ntBASIC-0.99□□□□□ -2.57
LIG4P49917 AC110620.1-201ENST00000416042 228 ntBASIC-0.99□□□□□ -2.57
LIG4P49917 RNU6-539P-201ENST00000516665 103 ntBASIC-0.99□□□□□ -2.57
LIG4P49917 RNU6-649P-201ENST00000384463 107 ntBASIC-1□□□□□ -2.57
LIG4P49917 RNU6-800P-201ENST00000384473 103 ntBASIC-1□□□□□ -2.57
LIG4P49917 RNU6-68P-201ENST00000516576 104 ntBASIC-1□□□□□ -2.57
LIG4P49917 RNU6-828P-201ENST00000364876 107 ntBASIC-1.01□□□□□ -2.57
LIG4P49917 MIR548H1-201ENST00000408610 102 ntBASIC-1.01□□□□□ -2.57
LIG4P49917 MIR548W-201ENST00000581970 74 ntBASIC-1.01□□□□□ -2.57
LIG4P49917 AC103706.3-201ENST00000636297 85 ntBASIC-1.01□□□□□ -2.57
LIG4P49917 U6.97-201ENST00000636904 101 ntBASIC-1.01□□□□□ -2.57
LIG4P49917 RNU6-776P-201ENST00000364403 104 ntBASIC-1.02□□□□□ -2.57
LIG4P49917 RNU6-1022P-201ENST00000365049 104 ntBASIC-1.02□□□□□ -2.57
LIG4P49917 RNU6-520P-201ENST00000384717 104 ntBASIC-1.02□□□□□ -2.57
LIG4P49917 RNU6-1275P-201ENST00000391087 107 ntBASIC-1.02□□□□□ -2.57
LIG4P49917 MIR548N-201ENST00000408742 75 ntBASIC-1.02□□□□□ -2.57
LIG4P49917 MIR3165-201ENST00000579874 75 ntBASIC-1.02□□□□□ -2.57
LIG4P49917 MIR3938-201ENST00000582157 103 ntBASIC-1.02□□□□□ -2.57
LIG4P49917 MIR202-201ENST00000362219 110 ntBASIC-1.03□□□□□ -2.57
LIG4P49917 RNU6-446P-201ENST00000362827 106 ntBASIC-1.03□□□□□ -2.57
LIG4P49917 RNU6-361P-201ENST00000364454 107 ntBASIC-1.03□□□□□ -2.57
LIG4P49917 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.03□□□□□ -2.57
LIG4P49917 MIR587-201ENST00000384845 96 ntBASIC-1.03□□□□□ -2.57
LIG4P49917 MIR548AM-201ENST00000584298 74 ntBASIC-1.03□□□□□ -2.57
LIG4P49917 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.04□□□□□ -2.58
LIG4P49917 RNA5SP331-201ENST00000364986 107 ntBASIC-1.04□□□□□ -2.58
LIG4P49917 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.04□□□□□ -2.58
LIG4P49917 RNU6-841P-201ENST00000383872 107 ntBASIC-1.04□□□□□ -2.58
LIG4P49917 AC108019.1-201ENST00000512540 175 ntBASIC-1.04□□□□□ -2.58
LIG4P49917 RNU6-871P-201ENST00000516122 100 ntBASIC-1.04□□□□□ -2.58
LIG4P49917 Y_RNA.685-201ENST00000516532 108 ntBASIC-1.04□□□□□ -2.58
LIG4P49917 MIR466-201ENST00000580653 84 ntBASIC-1.04□□□□□ -2.58
LIG4P49917 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.04□□□□□ -2.58
LIG4P49917 RNU6-940P-201ENST00000363433 104 ntBASIC-1.05□□□□□ -2.58
LIG4P49917 RNA5SP461-201ENST00000516451 104 ntBASIC-1.05□□□□□ -2.58
LIG4P49917 MIR4756-201ENST00000577874 78 ntBASIC-1.05□□□□□ -2.58
LIG4P49917 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.06□□□□□ -2.58
LIG4P49917 AL451105.1-201ENST00000450005 189 ntBASIC-1.06□□□□□ -2.58
LIG4P49917 snoU13.10-201ENST00000459301 103 ntBASIC-1.06□□□□□ -2.58
LIG4P49917 RNU6-419P-201ENST00000517030 63 ntBASIC-1.06□□□□□ -2.58
LIG4P49917 RNU6-742P-201ENST00000365289 107 ntBASIC-1.07□□□□□ -2.58
LIG4P49917 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.07□□□□□ -2.58
LIG4P49917 SNORD18.1-201ENST00000363807 70 ntBASIC-1.08□□□□□ -2.58
LIG4P49917 SNORD113-4-201ENST00000364802 75 ntBASIC-1.08□□□□□ -2.58
LIG4P49917 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.08□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 721.3 ms