Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 RNU6-815P-201ENST00000384080 113 ntBASIC0.75□□□□□ -2.29
COL9A1P20849 RNU6-901P-201ENST00000384593 106 ntBASIC0.75□□□□□ -2.29
COL9A1P20849 AC023932.2-201ENST00000603176 175 ntBASIC0.75□□□□□ -2.29
COL9A1P20849 MIR6866-201ENST00000638146 69 ntBASIC0.74□□□□□ -2.29
COL9A1P20849 SNORD18C-201ENST00000362704 69 ntBASIC0.73□□□□□ -2.29
COL9A1P20849 RNU6-695P-201ENST00000391157 104 ntBASIC0.73□□□□□ -2.29
COL9A1P20849 RNA5SP163-201ENST00000410304 99 ntBASIC0.73□□□□□ -2.29
COL9A1P20849 U6.97-201ENST00000636904 101 ntBASIC0.73□□□□□ -2.29
COL9A1P20849 MIR656-201ENST00000385224 78 ntBASIC0.72□□□□□ -2.29
COL9A1P20849 SNX3P1X-201ENST00000414887 175 ntBASIC0.72□□□□□ -2.29
COL9A1P20849 AC069113.3-201ENST00000521019 150 ntBASIC0.72□□□□□ -2.29
COL9A1P20849 Y_RNA.603-201ENST00000410571 108 ntBASIC0.71□□□□□ -2.3
COL9A1P20849 AC090625.1-201ENST00000357130 210 ntBASIC0.7□□□□□ -2.3
COL9A1P20849 RNU6-912P-201ENST00000363800 104 ntBASIC0.7□□□□□ -2.3
COL9A1P20849 SNORD56B-201ENST00000384713 71 ntBASIC0.7□□□□□ -2.3
COL9A1P20849 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC0.7□□□□□ -2.3
COL9A1P20849 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC0.7□□□□□ -2.3
COL9A1P20849 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
COL9A1P20849 RNU6-620P-201ENST00000384017 96 ntBASIC0.69□□□□□ -2.3
COL9A1P20849 RNU6-284P-201ENST00000411105 106 ntBASIC0.69□□□□□ -2.3
COL9A1P20849 RNA5SP499-201ENST00000363982 119 ntBASIC0.68□□□□□ -2.3
COL9A1P20849 RNU6-563P-201ENST00000364872 108 ntBASIC0.68□□□□□ -2.3
COL9A1P20849 AC120024.2-201ENST00000576526 175 ntBASIC0.68□□□□□ -2.3
COL9A1P20849 MIR4743-201ENST00000584576 69 ntBASIC0.68□□□□□ -2.3
COL9A1P20849 MIR548H2-201ENST00000408874 88 ntBASIC0.67□□□□□ -2.3
COL9A1P20849 Y_RNA.781-201ENST00000620301 103 ntBASIC0.67□□□□□ -2.3
COL9A1P20849 MIR146A-201ENST00000385201 99 ntBASIC0.66□□□□□ -2.3
COL9A1P20849 SNORD18.2-201ENST00000459604 70 ntBASIC0.66□□□□□ -2.3
COL9A1P20849 SNORD74.6-201ENST00000364796 70 ntBASIC0.65□□□□□ -2.31
COL9A1P20849 MIR4280-201ENST00000582178 76 ntBASIC0.65□□□□□ -2.31
COL9A1P20849 MIR610-201ENST00000385139 96 ntBASIC0.64□□□□□ -2.31
COL9A1P20849 RNU6-1327P-201ENST00000365302 105 ntBASIC0.62□□□□□ -2.31
COL9A1P20849 RNU6-1024P-201ENST00000384199 107 ntBASIC0.62□□□□□ -2.31
COL9A1P20849 MIR507-201ENST00000385234 94 ntBASIC0.62□□□□□ -2.31
COL9A1P20849 AC090616.4-201ENST00000448026 115 ntBASIC0.62□□□□□ -2.31
COL9A1P20849 AC104692.1-201ENST00000472406 90 ntBASIC0.62□□□□□ -2.31
COL9A1P20849 RNU6-345P-201ENST00000517001 107 ntBASIC0.62□□□□□ -2.31
COL9A1P20849 MIR4493-201ENST00000584016 73 ntBASIC0.62□□□□□ -2.31
COL9A1P20849 RNU6-1340P-201ENST00000384438 107 ntBASIC0.61□□□□□ -2.31
COL9A1P20849 MIR604-201ENST00000384880 94 ntBASIC0.61□□□□□ -2.31
COL9A1P20849 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.61□□□□□ -2.31
COL9A1P20849 AC244250.2-201ENST00000418731 148 ntBASIC0.61□□□□□ -2.31
COL9A1P20849 MIR4315-1-201ENST00000636800 73 ntBASIC0.61□□□□□ -2.31
COL9A1P20849 MIR4315-2-201ENST00000640925 73 ntBASIC0.61□□□□□ -2.31
COL9A1P20849 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.6□□□□□ -2.31
COL9A1P20849 SNORD95.1-201ENST00000364099 68 ntBASIC0.59□□□□□ -2.31
COL9A1P20849 MIR6851-201ENST00000617060 67 ntBASIC0.59□□□□□ -2.31
COL9A1P20849 RNU7-165P-201ENST00000458864 60 ntBASIC0.58□□□□□ -2.32
COL9A1P20849 SNORD114-17-201ENST00000364699 75 ntBASIC0.57□□□□□ -2.32
COL9A1P20849 Y_RNA.610-201ENST00000410681 103 ntBASIC0.57□□□□□ -2.32
COL9A1P20849 AL445193.1-201ENST00000441183 141 ntBASIC0.57□□□□□ -2.32
COL9A1P20849 SNORD38.3-201ENST00000516599 73 ntBASIC0.57□□□□□ -2.32
COL9A1P20849 MIR655-201ENST00000362159 97 ntBASIC0.56□□□□□ -2.32
COL9A1P20849 AC114737.2-201ENST00000421583 173 ntBASIC0.56□□□□□ -2.32
COL9A1P20849 RNU7-159P-201ENST00000459284 62 ntBASIC0.56□□□□□ -2.32
COL9A1P20849 Y_RNA.434-201ENST00000384090 100 ntBASIC0.55□□□□□ -2.32
COL9A1P20849 MIR593-201ENST00000384856 100 ntBASIC0.55□□□□□ -2.32
COL9A1P20849 MIR1254-1-201ENST00000408257 97 ntBASIC0.55□□□□□ -2.32
COL9A1P20849 RNU6-1043P-201ENST00000410355 99 ntBASIC0.55□□□□□ -2.32
COL9A1P20849 RNA5SP26-201ENST00000362406 119 ntBASIC0.54□□□□□ -2.32
COL9A1P20849 RNU6-1324P-201ENST00000384222 107 ntBASIC0.54□□□□□ -2.32
COL9A1P20849 MIR518B-201ENST00000385127 83 ntBASIC0.54□□□□□ -2.32
COL9A1P20849 SNORD22.1-201ENST00000516331 125 ntBASIC0.54□□□□□ -2.32
COL9A1P20849 AP001180.6-201ENST00000584918 159 ntBASIC0.54□□□□□ -2.32
COL9A1P20849 MIR5190-201ENST00000581537 80 ntBASIC0.53□□□□□ -2.32
COL9A1P20849 SNORD75.1-201ENST00000408373 60 ntBASIC0.52□□□□□ -2.33
COL9A1P20849 MIR6718-201ENST00000616153 80 ntBASIC0.52□□□□□ -2.33
COL9A1P20849 SNORD114-31-201ENST00000363219 75 ntBASIC0.51□□□□□ -2.33
COL9A1P20849 MIR92A1-201ENST00000385233 78 ntBASIC0.51□□□□□ -2.33
COL9A1P20849 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
COL9A1P20849 MIR1207-201ENST00000408249 87 ntBASIC0.51□□□□□ -2.33
COL9A1P20849 Y_RNA.189-201ENST00000363959 112 ntBASIC0.5□□□□□ -2.33
COL9A1P20849 RNU6-46P-201ENST00000383860 107 ntBASIC0.5□□□□□ -2.33
COL9A1P20849 MIR145-201ENST00000384967 88 ntBASIC0.5□□□□□ -2.33
COL9A1P20849 Y_RNA.59-201ENST00000362828 102 ntBASIC0.49□□□□□ -2.33
COL9A1P20849 SNORA50A-201ENST00000384225 134 ntBASIC0.49□□□□□ -2.33
COL9A1P20849 AL500527.2-201ENST00000454105 95 ntBASIC0.49□□□□□ -2.33
COL9A1P20849 SNORA32.1-201ENST00000364514 115 ntBASIC0.48□□□□□ -2.33
COL9A1P20849 AP000533.3-201ENST00000447704 118 ntBASIC0.48□□□□□ -2.33
COL9A1P20849 AC018880.2-201ENST00000414265 201 ntBASIC0.47□□□□□ -2.33
COL9A1P20849 MIR4645-201ENST00000583158 77 ntBASIC0.47□□□□□ -2.33
COL9A1P20849 U4.2-201ENST00000618561 85 ntBASIC0.47□□□□□ -2.33
COL9A1P20849 SNORD19B.1-201ENST00000630615 80 ntBASIC0.47□□□□□ -2.33
COL9A1P20849 RNU6-79P-201ENST00000362511 107 ntBASIC0.46□□□□□ -2.34
COL9A1P20849 RNU6-854P-201ENST00000364036 107 ntBASIC0.46□□□□□ -2.34
COL9A1P20849 SNORA13-201ENST00000458790 133 ntBASIC0.46□□□□□ -2.34
COL9A1P20849 Y_RNA.349-201ENST00000365406 102 ntBASIC0.45□□□□□ -2.34
COL9A1P20849 MIR3179-1-201ENST00000578940 84 ntBASIC0.45□□□□□ -2.34
COL9A1P20849 MIR3179-2-201ENST00000579107 84 ntBASIC0.45□□□□□ -2.34
COL9A1P20849 MIR3179-3-201ENST00000579566 84 ntBASIC0.45□□□□□ -2.34
COL9A1P20849 MIR3179-4-201ENST00000617599 84 ntBASIC0.45□□□□□ -2.34
COL9A1P20849 RNA5SP214-201ENST00000363378 118 ntBASIC0.44□□□□□ -2.34
COL9A1P20849 RNU6-422P-201ENST00000384632 107 ntBASIC0.44□□□□□ -2.34
COL9A1P20849 RNA5SP66-201ENST00000517178 101 ntBASIC0.44□□□□□ -2.34
COL9A1P20849 SNORD49B-201ENST00000365172 72 ntBASIC0.43□□□□□ -2.34
COL9A1P20849 MIR548H1-201ENST00000408610 102 ntBASIC0.43□□□□□ -2.34
COL9A1P20849 AC093726.3-201ENST00000637588 150 ntBASIC0.43□□□□□ -2.34
COL9A1P20849 MIR601-201ENST00000385256 79 ntBASIC0.42□□□□□ -2.34
COL9A1P20849 RNU6-627P-201ENST00000364032 102 ntBASIC0.41□□□□□ -2.34
COL9A1P20849 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 195.8 ms