Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 RNU6-608P-201ENST00000383927 104 ntBASIC-1.01□□□□□ -2.57
HLA-DOBP13765 RNU6-810P-201ENST00000364001 107 ntBASIC-1.02□□□□□ -2.57
HLA-DOBP13765 RNU6-520P-201ENST00000384717 104 ntBASIC-1.02□□□□□ -2.57
HLA-DOBP13765 SNORA40B-201ENST00000385573 128 ntBASIC-1.02□□□□□ -2.57
HLA-DOBP13765 RPL35AP4-201ENST00000412007 102 ntBASIC-1.02□□□□□ -2.57
HLA-DOBP13765 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.03□□□□□ -2.57
HLA-DOBP13765 MIR23C-201ENST00000579846 100 ntBASIC-1.03□□□□□ -2.57
HLA-DOBP13765 RNU7-134P-201ENST00000458997 64 ntBASIC-1.04□□□□□ -2.58
HLA-DOBP13765 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.04□□□□□ -2.58
HLA-DOBP13765 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.05□□□□□ -2.58
HLA-DOBP13765 RNA5SP368-201ENST00000364298 116 ntBASIC-1.05□□□□□ -2.58
HLA-DOBP13765 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.05□□□□□ -2.58
HLA-DOBP13765 RNU6-576P-201ENST00000390854 102 ntBASIC-1.05□□□□□ -2.58
HLA-DOBP13765 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.05□□□□□ -2.58
HLA-DOBP13765 AC090616.4-201ENST00000448026 115 ntBASIC-1.05□□□□□ -2.58
HLA-DOBP13765 SNORD63.2-201ENST00000516303 64 ntBASIC-1.05□□□□□ -2.58
HLA-DOBP13765 MIR378F-201ENST00000578143 78 ntBASIC-1.05□□□□□ -2.58
HLA-DOBP13765 RNU6-828P-201ENST00000364876 107 ntBASIC-1.06□□□□□ -2.58
HLA-DOBP13765 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.06□□□□□ -2.58
HLA-DOBP13765 AC125388.1-201ENST00000459631 156 ntBASIC-1.06□□□□□ -2.58
HLA-DOBP13765 MIR1265-201ENST00000408444 86 ntBASIC-1.07□□□□□ -2.58
HLA-DOBP13765 SNORA40.16-201ENST00000517238 121 ntBASIC-1.07□□□□□ -2.58
HLA-DOBP13765 SNORA27.2-201ENST00000363365 126 ntBASIC-1.08□□□□□ -2.58
HLA-DOBP13765 RNU6-164P-201ENST00000364604 103 ntBASIC-1.08□□□□□ -2.58
HLA-DOBP13765 RNA5SP25-201ENST00000410815 110 ntBASIC-1.08□□□□□ -2.58
HLA-DOBP13765 Y_RNA.433-201ENST00000384089 102 ntBASIC-1.09□□□□□ -2.58
HLA-DOBP13765 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.09□□□□□ -2.58
HLA-DOBP13765 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.1□□□□□ -2.59
HLA-DOBP13765 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-1.11□□□□□ -2.59
HLA-DOBP13765 RNU6-258P-201ENST00000390884 101 ntBASIC-1.11□□□□□ -2.59
HLA-DOBP13765 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.12□□□□□ -2.59
HLA-DOBP13765 MIR1468-201ENST00000410600 86 ntBASIC-1.12□□□□□ -2.59
HLA-DOBP13765 AC018880.2-201ENST00000414265 201 ntBASIC-1.13□□□□□ -2.59
HLA-DOBP13765 AC139453.2-201ENST00000487255 133 ntBASIC-1.15□□□□□ -2.59
HLA-DOBP13765 MIR4324-201ENST00000584846 72 ntBASIC-1.15□□□□□ -2.59
HLA-DOBP13765 MIR4306-201ENST00000583390 91 ntBASIC-1.16□□□□□ -2.6
HLA-DOBP13765 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.17□□□□□ -2.6
HLA-DOBP13765 RNU6-974P-201ENST00000384099 108 ntBASIC-1.17□□□□□ -2.6
HLA-DOBP13765 MIR8485-201ENST00000401372 91 ntBASIC-1.17□□□□□ -2.6
HLA-DOBP13765 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.18□□□□□ -2.6
HLA-DOBP13765 MIR6738-201ENST00000619620 64 ntBASIC-1.18□□□□□ -2.6
HLA-DOBP13765 SNORD45.2-201ENST00000363552 72 ntBASIC-1.19□□□□□ -2.6
HLA-DOBP13765 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.19□□□□□ -2.6
HLA-DOBP13765 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.2□□□□□ -2.6
HLA-DOBP13765 AC091912.2-201ENST00000624798 167 ntBASIC-1.2□□□□□ -2.6
HLA-DOBP13765 MIR548AX-201ENST00000580117 73 ntBASIC-1.21□□□□□ -2.6
HLA-DOBP13765 RNU6-79P-201ENST00000362511 107 ntBASIC-1.22□□□□□ -2.6
HLA-DOBP13765 AL451105.1-201ENST00000450005 189 ntBASIC-1.22□□□□□ -2.6
HLA-DOBP13765 MIR6086-201ENST00000638065 55 ntBASIC-1.22□□□□□ -2.6
HLA-DOBP13765 RNU6-446P-201ENST00000362827 106 ntBASIC-1.23□□□□□ -2.61
HLA-DOBP13765 RNU6-419P-201ENST00000517030 63 ntBASIC-1.23□□□□□ -2.61
HLA-DOBP13765 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.23□□□□□ -2.61
HLA-DOBP13765 MIR6874-201ENST00000635894 71 ntBASIC-1.23□□□□□ -2.61
HLA-DOBP13765 AC120024.2-201ENST00000576526 175 ntBASIC-1.24□□□□□ -2.61
HLA-DOBP13765 SNORD114-15-201ENST00000364687 72 ntBASIC-1.25□□□□□ -2.61
HLA-DOBP13765 RNU6-400P-201ENST00000391173 106 ntBASIC-1.25□□□□□ -2.61
HLA-DOBP13765 MIR633-201ENST00000384821 98 ntBASIC-1.26□□□□□ -2.61
HLA-DOBP13765 RNU6-10P-201ENST00000384036 107 ntBASIC-1.28□□□□□ -2.61
HLA-DOBP13765 RNY3P8-201ENST00000411366 126 ntBASIC-1.28□□□□□ -2.61
HLA-DOBP13765 MIR3115-201ENST00000577915 68 ntBASIC-1.28□□□□□ -2.61
HLA-DOBP13765 RNU6-829P-201ENST00000363700 112 ntBASIC-1.29□□□□□ -2.62
HLA-DOBP13765 RNU6-788P-201ENST00000390967 104 ntBASIC-1.29□□□□□ -2.62
HLA-DOBP13765 RNU6-1312P-201ENST00000362425 108 ntBASIC-1.3□□□□□ -2.62
HLA-DOBP13765 RNU6-563P-201ENST00000364872 108 ntBASIC-1.3□□□□□ -2.62
HLA-DOBP13765 RNU6-706P-201ENST00000517229 104 ntBASIC-1.3□□□□□ -2.62
HLA-DOBP13765 MIR548X-201ENST00000580069 75 ntBASIC-1.3□□□□□ -2.62
HLA-DOBP13765 RNU6-530P-201ENST00000391180 107 ntBASIC-1.31□□□□□ -2.62
HLA-DOBP13765 AC079150.2-201ENST00000443733 78 ntBASIC-1.31□□□□□ -2.62
HLA-DOBP13765 MIR6502-201ENST00000617296 76 ntBASIC-1.31□□□□□ -2.62
HLA-DOBP13765 RNA5SP476-201ENST00000516613 103 ntBASIC-1.32□□□□□ -2.62
HLA-DOBP13765 RNU6-361P-201ENST00000364454 107 ntBASIC-1.33□□□□□ -2.62
HLA-DOBP13765 RNU6-499P-201ENST00000365615 107 ntBASIC-1.33□□□□□ -2.62
HLA-DOBP13765 SNORD60-201ENST00000383903 83 ntBASIC-1.33□□□□□ -2.62
HLA-DOBP13765 MIR4520-1-201ENST00000582609 70 ntBASIC-1.33□□□□□ -2.62
HLA-DOBP13765 AC138207.3-201ENST00000585289 166 ntBASIC-1.33□□□□□ -2.62
HLA-DOBP13765 AC013734.1-201ENST00000619329 111 ntBASIC-1.34□□□□□ -2.62
HLA-DOBP13765 MIR3165-201ENST00000579874 75 ntBASIC-1.35□□□□□ -2.63
HLA-DOBP13765 MIR202-201ENST00000362219 110 ntBASIC-1.36□□□□□ -2.63
HLA-DOBP13765 SNORD113-4-201ENST00000364802 75 ntBASIC-1.36□□□□□ -2.63
HLA-DOBP13765 SNORA17.4-201ENST00000391287 132 ntBASIC-1.37□□□□□ -2.63
HLA-DOBP13765 MIR5591-201ENST00000578248 65 ntBASIC-1.37□□□□□ -2.63
HLA-DOBP13765 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.38□□□□□ -2.63
HLA-DOBP13765 HLA-S-202ENST00000425174 53 ntBASIC-1.38□□□□□ -2.63
HLA-DOBP13765 Y_RNA.722-201ENST00000517279 114 ntBASIC-1.38□□□□□ -2.63
HLA-DOBP13765 MIR587-201ENST00000384845 96 ntBASIC-1.39□□□□□ -2.63
HLA-DOBP13765 RNU6-695P-201ENST00000391157 104 ntBASIC-1.4□□□□□ -2.63
HLA-DOBP13765 MIR4426-201ENST00000640330 63 ntBASIC-1.4□□□□□ -2.63
HLA-DOBP13765 RNU6-30P-201ENST00000384561 107 ntBASIC-1.41□□□□□ -2.64
HLA-DOBP13765 MIR548N-201ENST00000408742 75 ntBASIC-1.41□□□□□ -2.64
HLA-DOBP13765 snoU13.19-201ENST00000459148 104 ntBASIC-1.41□□□□□ -2.64
HLA-DOBP13765 U6.97-201ENST00000636904 101 ntBASIC-1.41□□□□□ -2.64
HLA-DOBP13765 SNORD18C-201ENST00000362704 69 ntBASIC-1.42□□□□□ -2.64
HLA-DOBP13765 MIR4770-201ENST00000579149 58 ntBASIC-1.43□□□□□ -2.64
HLA-DOBP13765 RNU6-176P-201ENST00000517196 105 ntBASIC-1.44□□□□□ -2.64
HLA-DOBP13765 RNU6-226P-201ENST00000363778 107 ntBASIC-1.45□□□□□ -2.64
HLA-DOBP13765 RNU4-33P-201ENST00000364316 85 ntBASIC-1.45□□□□□ -2.64
HLA-DOBP13765 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.46□□□□□ -2.64
HLA-DOBP13765 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.46□□□□□ -2.64
HLA-DOBP13765 RNA5SP86-201ENST00000390869 98 ntBASIC-1.46□□□□□ -2.64
HLA-DOBP13765 RNA5SP67-201ENST00000516422 131 ntBASIC-1.46□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 259.6 ms