Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 RNA5SP461-201ENST00000516451 104 ntBASIC0.1□□□□□ -2.39
RARAP10276 SNORD38.3-201ENST00000516599 73 ntBASIC0.1□□□□□ -2.39
RARAP10276 MIR378F-201ENST00000578143 78 ntBASIC0.1□□□□□ -2.39
RARAP10276 MIR3170-201ENST00000582699 77 ntBASIC0.1□□□□□ -2.39
RARAP10276 RNU6-1233P-201ENST00000362922 102 ntBASIC0.09□□□□□ -2.4
RARAP10276 RNU6-930P-201ENST00000390938 100 ntBASIC0.08□□□□□ -2.4
RARAP10276 AL451105.1-201ENST00000450005 189 ntBASIC0.08□□□□□ -2.4
RARAP10276 MIR3681-201ENST00000580089 72 ntBASIC0.08□□□□□ -2.4
RARAP10276 AL590491.3-201ENST00000610731 82 ntBASIC0.08□□□□□ -2.4
RARAP10276 RNA5SP66-201ENST00000517178 101 ntBASIC0.07□□□□□ -2.4
RARAP10276 MIR4667-201ENST00000578933 66 ntBASIC0.07□□□□□ -2.4
RARAP10276 Y_RNA.403-201ENST00000383977 101 ntBASIC0.06□□□□□ -2.4
RARAP10276 SNORD19-201ENST00000391191 68 ntBASIC0.06□□□□□ -2.4
RARAP10276 MIR4441-201ENST00000582623 100 ntBASIC0.06□□□□□ -2.4
RARAP10276 DLEU2_4.2-201ENST00000616613 58 ntBASIC0.06□□□□□ -2.4
RARAP10276 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.06□□□□□ -2.4
RARAP10276 RNU6-974P-201ENST00000384099 108 ntBASIC0.05□□□□□ -2.4
RARAP10276 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
RARAP10276 RNU6-1111P-201ENST00000391118 107 ntBASIC0.05□□□□□ -2.4
RARAP10276 SNORD63.2-201ENST00000516303 64 ntBASIC0.05□□□□□ -2.4
RARAP10276 RNU6-247P-201ENST00000362636 107 ntBASIC0.04□□□□□ -2.4
RARAP10276 SNORD74.6-201ENST00000364796 70 ntBASIC0.04□□□□□ -2.4
RARAP10276 MIR548Q-201ENST00000408404 100 ntBASIC0.04□□□□□ -2.4
RARAP10276 RNU6-838P-201ENST00000363399 108 ntBASIC0.03□□□□□ -2.4
RARAP10276 AC093726.3-201ENST00000637588 150 ntBASIC0.03□□□□□ -2.4
RARAP10276 MIR548F3-201ENST00000408509 87 ntBASIC0.02□□□□□ -2.41
RARAP10276 SNORD18.2-201ENST00000459604 70 ntBASIC0.02□□□□□ -2.41
RARAP10276 RNY4-201ENST00000516507 96 ntBASIC0.02□□□□□ -2.41
RARAP10276 RNU6-10P-201ENST00000384036 107 ntBASIC0.01□□□□□ -2.41
RARAP10276 Y_RNA.475-201ENST00000384345 101 ntBASIC0.01□□□□□ -2.41
RARAP10276 MIR4263-201ENST00000584745 83 ntBASIC0.01□□□□□ -2.41
RARAP10276 SNORA18.1-201ENST00000363418 128 ntBASIC0□□□□□ -2.41
RARAP10276 SNORD114-12-201ENST00000365400 75 ntBASIC0□□□□□ -2.41
RARAP10276 MIR518B-201ENST00000385127 83 ntBASIC-0.01□□□□□ -2.41
RARAP10276 RNA5SP180-201ENST00000516181 101 ntBASIC-0.01□□□□□ -2.41
RARAP10276 SNORD45.2-201ENST00000363552 72 ntBASIC-0.02□□□□□ -2.41
RARAP10276 Y_RNA.321-201ENST00000365149 102 ntBASIC-0.02□□□□□ -2.41
RARAP10276 MIR520D-201ENST00000385002 87 ntBASIC-0.02□□□□□ -2.41
RARAP10276 SNORD22.1-201ENST00000516331 125 ntBASIC-0.02□□□□□ -2.41
RARAP10276 MIR1295B-201ENST00000636144 60 ntBASIC-0.02□□□□□ -2.41
RARAP10276 SNORA26.4-201ENST00000391188 123 ntBASIC-0.03□□□□□ -2.41
RARAP10276 MIR1285-2-201ENST00000408311 88 ntBASIC-0.03□□□□□ -2.41
RARAP10276 MT-TQ-201ENST00000387372 72 ntBASIC-0.04□□□□□ -2.42
RARAP10276 SNORD75.1-201ENST00000408373 60 ntBASIC-0.04□□□□□ -2.42
RARAP10276 MIR3666-201ENST00000607845 111 ntBASIC-0.04□□□□□ -2.42
RARAP10276 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
RARAP10276 RNU6-258P-201ENST00000390884 101 ntBASIC-0.05□□□□□ -2.42
RARAP10276 AP002795.1-201ENST00000534879 84 ntBASIC-0.05□□□□□ -2.42
RARAP10276 MIR6738-201ENST00000619620 64 ntBASIC-0.05□□□□□ -2.42
RARAP10276 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.06□□□□□ -2.42
RARAP10276 SNORD115-33-201ENST00000363723 82 ntBASIC-0.08□□□□□ -2.42
RARAP10276 MIR29B1-201ENST00000385015 81 ntBASIC-0.08□□□□□ -2.42
RARAP10276 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.08□□□□□ -2.42
RARAP10276 AL353691.2-201ENST00000443795 59 ntBASIC-0.08□□□□□ -2.42
RARAP10276 SNORD4A-201ENST00000459174 72 ntBASIC-0.08□□□□□ -2.42
RARAP10276 MIR4324-201ENST00000584846 72 ntBASIC-0.08□□□□□ -2.42
RARAP10276 MIR5683-201ENST00000636514 76 ntBASIC-0.08□□□□□ -2.42
RARAP10276 MIR204-201ENST00000385200 110 ntBASIC-0.09□□□□□ -2.42
RARAP10276 MIR548AL-201ENST00000578416 97 ntBASIC-0.09□□□□□ -2.42
RARAP10276 MIR4788-201ENST00000639104 80 ntBASIC-0.09□□□□□ -2.42
RARAP10276 SNORA32.3-201ENST00000384772 121 ntBASIC-0.1□□□□□ -2.43
RARAP10276 Y_RNA.699-201ENST00000516803 93 ntBASIC-0.1□□□□□ -2.43
RARAP10276 MIR3179-1-201ENST00000578940 84 ntBASIC-0.1□□□□□ -2.43
RARAP10276 MIR3179-2-201ENST00000579107 84 ntBASIC-0.1□□□□□ -2.43
RARAP10276 MIR3179-3-201ENST00000579566 84 ntBASIC-0.1□□□□□ -2.43
RARAP10276 MIR3179-4-201ENST00000617599 84 ntBASIC-0.1□□□□□ -2.43
RARAP10276 SNORA13-201ENST00000458790 133 ntBASIC-0.11□□□□□ -2.43
RARAP10276 RNA5SP169-201ENST00000517268 117 ntBASIC-0.11□□□□□ -2.43
RARAP10276 SNORA27.2-201ENST00000363365 126 ntBASIC-0.12□□□□□ -2.43
RARAP10276 SNORD114-11-201ENST00000363738 75 ntBASIC-0.12□□□□□ -2.43
RARAP10276 RNA5SP300-201ENST00000391197 107 ntBASIC-0.12□□□□□ -2.43
RARAP10276 AP000533.3-201ENST00000447704 118 ntBASIC-0.12□□□□□ -2.43
RARAP10276 SNORD114-17-201ENST00000364699 75 ntBASIC-0.13□□□□□ -2.43
RARAP10276 RNU6-530P-201ENST00000391180 107 ntBASIC-0.13□□□□□ -2.43
RARAP10276 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.14□□□□□ -2.43
RARAP10276 RNA5SP275-201ENST00000363936 118 ntBASIC-0.15□□□□□ -2.43
RARAP10276 MIR545-201ENST00000385085 106 ntBASIC-0.15□□□□□ -2.43
RARAP10276 MIR496-201ENST00000385226 102 ntBASIC-0.15□□□□□ -2.43
RARAP10276 RNU6-608P-201ENST00000383927 104 ntBASIC-0.16□□□□□ -2.44
RARAP10276 MIR548AZ-201ENST00000616567 95 ntBASIC-0.16□□□□□ -2.44
RARAP10276 SCARNA17-201ENST00000516183 144 ntBASIC-0.17□□□□□ -2.44
RARAP10276 MIR3115-201ENST00000577915 68 ntBASIC-0.17□□□□□ -2.44
RARAP10276 RNU6-721P-201ENST00000410155 105 ntBASIC-0.18□□□□□ -2.44
RARAP10276 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.18□□□□□ -2.44
RARAP10276 RNU6-320P-201ENST00000516511 106 ntBASIC-0.19□□□□□ -2.44
RARAP10276 RNU6-742P-201ENST00000365289 107 ntBASIC-0.22□□□□□ -2.44
RARAP10276 RNA5SP93-201ENST00000362525 114 ntBASIC-0.23□□□□□ -2.45
RARAP10276 RNU6-986P-201ENST00000363133 102 ntBASIC-0.24□□□□□ -2.45
RARAP10276 RNU6-119P-201ENST00000364882 107 ntBASIC-0.24□□□□□ -2.45
RARAP10276 RNU6-1204P-201ENST00000363948 107 ntBASIC-0.25□□□□□ -2.45
RARAP10276 Y_RNA.421-201ENST00000384052 101 ntBASIC-0.25□□□□□ -2.45
RARAP10276 SNORD126-201ENST00000459475 77 ntBASIC-0.25□□□□□ -2.45
RARAP10276 MIR507-201ENST00000385234 94 ntBASIC-0.28□□□□□ -2.45
RARAP10276 RNU6-1247P-201ENST00000516622 98 ntBASIC-0.28□□□□□ -2.45
RARAP10276 RPL35AP4-201ENST00000412007 102 ntBASIC-0.29□□□□□ -2.46
RARAP10276 AC021146.6-201ENST00000514659 117 ntBASIC-0.29□□□□□ -2.46
RARAP10276 MIR4426-201ENST00000640330 63 ntBASIC-0.29□□□□□ -2.46
RARAP10276 RNY3P8-201ENST00000411366 126 ntBASIC-0.3□□□□□ -2.46
RARAP10276 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-0.31□□□□□ -2.46
RARAP10276 RNU6-361P-201ENST00000364454 107 ntBASIC-0.32□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms