Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 RNU6-361P-201ENST00000364454 107 ntBASIC-3.91□□□□□ -3.04
HMGB3O15347 MIR379-201ENST00000362218 67 ntBASIC-3.92□□□□□ -3.04
HMGB3O15347 Y_RNA.69-201ENST00000362885 109 ntBASIC-3.92□□□□□ -3.04
HMGB3O15347 RNU6-912P-201ENST00000363800 104 ntBASIC-3.92□□□□□ -3.04
HMGB3O15347 RNU6-828P-201ENST00000364876 107 ntBASIC-3.92□□□□□ -3.04
HMGB3O15347 RNA5SP106-201ENST00000517274 100 ntBASIC-3.92□□□□□ -3.04
HMGB3O15347 MIRLET7A3-201ENST00000362116 74 ntBASIC-3.93□□□□□ -3.04
HMGB3O15347 RNU6-554P-201ENST00000410466 106 ntBASIC-3.93□□□□□ -3.04
HMGB3O15347 Y_RNA.266-201ENST00000364678 96 ntBASIC-3.94□□□□□ -3.04
HMGB3O15347 MIR548BB-201ENST00000626714 66 ntBASIC-3.94□□□□□ -3.04
HMGB3O15347 RNU6-219P-201ENST00000364728 107 ntBASIC-3.95□□□□□ -3.04
HMGB3O15347 SNORD116-22-201ENST00000384430 92 ntBASIC-3.95□□□□□ -3.04
HMGB3O15347 AL731768.1-201ENST00000603124 139 ntBASIC-3.95□□□□□ -3.04
HMGB3O15347 Y_RNA.218-201ENST00000364218 104 ntBASIC-3.96□□□□□ -3.04
HMGB3O15347 RNU6-380P-201ENST00000410207 107 ntBASIC-3.96□□□□□ -3.04
HMGB3O15347 RNU6-789P-201ENST00000517105 102 ntBASIC-3.96□□□□□ -3.04
HMGB3O15347 MIR4503-201ENST00000582187 83 ntBASIC-3.96□□□□□ -3.04
HMGB3O15347 RNU6-530P-201ENST00000391180 107 ntBASIC-3.97□□□□□ -3.04
HMGB3O15347 RNU7-200P-201ENST00000516105 62 ntBASIC-3.97□□□□□ -3.04
HMGB3O15347 RNY4P10-201ENST00000365571 96 ntBASIC-3.98□□□□□ -3.05
HMGB3O15347 RNU6-1044P-201ENST00000384755 107 ntBASIC-3.98□□□□□ -3.05
HMGB3O15347 MIR548AJ2-201ENST00000408539 92 ntBASIC-3.98□□□□□ -3.05
HMGB3O15347 RNU6-68P-201ENST00000516576 104 ntBASIC-3.98□□□□□ -3.05
HMGB3O15347 Y_RNA.544-201ENST00000384650 113 ntBASIC-4□□□□□ -3.05
HMGB3O15347 AP001318.4-201ENST00000616637 121 ntBASIC-4□□□□□ -3.05
HMGB3O15347 Y_RNA.657-201ENST00000515983 102 ntBASIC-4.01□□□□□ -3.05
HMGB3O15347 MIR2052-201ENST00000636055 55 ntBASIC-4.01□□□□□ -3.05
HMGB3O15347 MIR7110-201ENST00000612638 86 ntBASIC-4.02□□□□□ -3.05
HMGB3O15347 RNU6-267P-201ENST00000516714 103 ntBASIC-4.03□□□□□ -3.05
HMGB3O15347 Y_RNA.129-201ENST00000363392 110 ntBASIC-4.04□□□□□ -3.06
HMGB3O15347 MIR664A-201ENST00000626086 82 ntBASIC-4.04□□□□□ -3.06
HMGB3O15347 RNU6-886P-201ENST00000384319 105 ntBASIC-4.05□□□□□ -3.06
HMGB3O15347 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-4.05□□□□□ -3.06
HMGB3O15347 RNU6-379P-201ENST00000363813 104 ntBASIC-4.06□□□□□ -3.06
HMGB3O15347 SNORD116-24-201ENST00000384549 92 ntBASIC-4.06□□□□□ -3.06
HMGB3O15347 SNORD114-13-201ENST00000364377 74 ntBASIC-4.07□□□□□ -3.06
HMGB3O15347 SNORD116-14-201ENST00000383894 92 ntBASIC-4.07□□□□□ -3.06
HMGB3O15347 SNORD116-17-201ENST00000383929 92 ntBASIC-4.07□□□□□ -3.06
HMGB3O15347 Y_RNA.434-201ENST00000384090 100 ntBASIC-4.07□□□□□ -3.06
HMGB3O15347 SNORD116-15-201ENST00000384445 92 ntBASIC-4.07□□□□□ -3.06
HMGB3O15347 SNORD116-19-201ENST00000384729 92 ntBASIC-4.07□□□□□ -3.06
HMGB3O15347 Y_RNA.612-201ENST00000410717 95 ntBASIC-4.07□□□□□ -3.06
HMGB3O15347 RNU6-1206P-201ENST00000516339 103 ntBASIC-4.07□□□□□ -3.06
HMGB3O15347 RNU6-92P-201ENST00000605893 104 ntBASIC-4.07□□□□□ -3.06
HMGB3O15347 RNU6-810P-201ENST00000364001 107 ntBASIC-4.08□□□□□ -3.06
HMGB3O15347 RNU6-196P-201ENST00000384315 107 ntBASIC-4.08□□□□□ -3.06
HMGB3O15347 Y_RNA.611-201ENST00000410682 108 ntBASIC-4.08□□□□□ -3.06
HMGB3O15347 RNU6-1047P-201ENST00000364418 107 ntBASIC-4.09□□□□□ -3.06
HMGB3O15347 MIR1254-1-201ENST00000408257 97 ntBASIC-4.09□□□□□ -3.06
HMGB3O15347 RNU6-542P-201ENST00000516405 103 ntBASIC-4.1□□□□□ -3.07
HMGB3O15347 Y_RNA.604-201ENST00000410574 102 ntBASIC-4.11□□□□□ -3.07
HMGB3O15347 MIR548AI-201ENST00000579940 88 ntBASIC-4.11□□□□□ -3.07
HMGB3O15347 MIR4426-201ENST00000640330 63 ntBASIC-4.11□□□□□ -3.07
HMGB3O15347 RNU6-797P-201ENST00000363101 109 ntBASIC-4.12□□□□□ -3.07
HMGB3O15347 SNORA63-201ENST00000363450 132 ntBASIC-4.12□□□□□ -3.07
HMGB3O15347 AC006160.2-201ENST00000637708 154 ntBASIC-4.12□□□□□ -3.07
HMGB3O15347 RNU6-1241P-201ENST00000384536 107 ntBASIC-4.13□□□□□ -3.07
HMGB3O15347 RNU6-388P-201ENST00000517012 105 ntBASIC-4.13□□□□□ -3.07
HMGB3O15347 RNU6-389P-201ENST00000517048 105 ntBASIC-4.13□□□□□ -3.07
HMGB3O15347 RNU6-231P-201ENST00000517122 103 ntBASIC-4.13□□□□□ -3.07
HMGB3O15347 RNU6-590P-201ENST00000365039 107 ntBASIC-4.14□□□□□ -3.07
HMGB3O15347 RNU6-315P-201ENST00000362666 107 ntBASIC-4.15□□□□□ -3.07
HMGB3O15347 RNU6-1296P-201ENST00000383879 107 ntBASIC-4.15□□□□□ -3.07
HMGB3O15347 RNY1P5-201ENST00000383890 115 ntBASIC-4.15□□□□□ -3.07
HMGB3O15347 TMSB4XP3-201ENST00000445144 114 ntBASIC-4.15□□□□□ -3.07
HMGB3O15347 RNU6-300P-201ENST00000459080 104 ntBASIC-4.15□□□□□ -3.07
HMGB3O15347 RNU6-346P-201ENST00000516288 111 ntBASIC-4.15□□□□□ -3.07
HMGB3O15347 SNORD60.1-201ENST00000362451 73 ntBASIC-4.16□□□□□ -3.08
HMGB3O15347 RNU6-895P-201ENST00000384125 103 ntBASIC-4.16□□□□□ -3.08
HMGB3O15347 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-4.16□□□□□ -3.08
HMGB3O15347 RNU6-907P-201ENST00000390924 102 ntBASIC-4.16□□□□□ -3.08
HMGB3O15347 RNU6-176P-201ENST00000517196 105 ntBASIC-4.16□□□□□ -3.08
HMGB3O15347 SNORD45.2-201ENST00000363552 72 ntBASIC-4.17□□□□□ -3.08
HMGB3O15347 Y_RNA.320-201ENST00000365144 102 ntBASIC-4.17□□□□□ -3.08
HMGB3O15347 Y_RNA.506-201ENST00000384494 102 ntBASIC-4.17□□□□□ -3.08
HMGB3O15347 RNU6-345P-201ENST00000517001 107 ntBASIC-4.17□□□□□ -3.08
HMGB3O15347 AL359920.1-201ENST00000618332 176 ntBASIC-4.17□□□□□ -3.08
HMGB3O15347 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-4.17□□□□□ -3.08
HMGB3O15347 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-4.18□□□□□ -3.08
HMGB3O15347 RNU6-867P-201ENST00000364956 107 ntBASIC-4.19□□□□□ -3.08
HMGB3O15347 RNU6-800P-201ENST00000384473 103 ntBASIC-4.19□□□□□ -3.08
HMGB3O15347 SNORD116.2-201ENST00000391251 93 ntBASIC-4.19□□□□□ -3.08
HMGB3O15347 Y_RNA.652-201ENST00000458902 102 ntBASIC-4.19□□□□□ -3.08
HMGB3O15347 RNU6-327P-201ENST00000516270 127 ntBASIC-4.19□□□□□ -3.08
HMGB3O15347 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-4.19□□□□□ -3.08
HMGB3O15347 MALAT1.1-201ENST00000618249 95 ntBASIC-4.19□□□□□ -3.08
HMGB3O15347 Y_RNA.273-201ENST00000364703 102 ntBASIC-4.2□□□□□ -3.08
HMGB3O15347 SNORA40B-201ENST00000385573 128 ntBASIC-4.2□□□□□ -3.08
HMGB3O15347 RNU6-1212P-201ENST00000517023 104 ntBASIC-4.2□□□□□ -3.08
HMGB3O15347 Y_RNA.63-201ENST00000362841 102 ntBASIC-4.21□□□□□ -3.08
HMGB3O15347 RNU6-675P-201ENST00000384236 104 ntBASIC-4.21□□□□□ -3.08
HMGB3O15347 MIR154-201ENST00000385243 84 ntBASIC-4.21□□□□□ -3.08
HMGB3O15347 AL117351.2-201ENST00000513571 157 ntBASIC-4.21□□□□□ -3.08
HMGB3O15347 Y_RNA.464-201ENST00000384282 110 ntBASIC-4.22□□□□□ -3.08
HMGB3O15347 Y_RNA.607-201ENST00000410597 98 ntBASIC-4.24□□□□□ -3.09
HMGB3O15347 AL451105.1-201ENST00000450005 189 ntBASIC-4.25□□□□□ -3.09
HMGB3O15347 RNU6-70P-201ENST00000516438 60 ntBASIC-4.26□□□□□ -3.09
HMGB3O15347 MT-TG-201ENST00000387429 68 ntBASIC-4.28□□□□□ -3.09
HMGB3O15347 RNU6-463P-201ENST00000384340 107 ntBASIC-4.29□□□□□ -3.1
HMGB3O15347 RNU6-1045P-201ENST00000516321 107 ntBASIC-4.3□□□□□ -3.1
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms