Protein–RNA interactions for Protein: A0A0J9YXS1

NPHP3-ACAD11, NPHP3-ACAD11 readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11A0A0J9YXS1 RNU4-37P-201ENST00000410214 84 ntBASIC-0.66□□□□□ -2.52
NPHP3-ACAD11A0A0J9YXS1 AL451105.1-201ENST00000450005 189 ntBASIC-0.66□□□□□ -2.52
NPHP3-ACAD11A0A0J9YXS1 MIR4802-201ENST00000581881 80 ntBASIC-0.66□□□□□ -2.52
NPHP3-ACAD11A0A0J9YXS1 AP001180.6-201ENST00000584918 159 ntBASIC-0.66□□□□□ -2.52
NPHP3-ACAD11A0A0J9YXS1 MIR147A-201ENST00000385079 72 ntBASIC-0.67□□□□□ -2.52
NPHP3-ACAD11A0A0J9YXS1 MIR5589-201ENST00000579442 60 ntBASIC-0.67□□□□□ -2.52
NPHP3-ACAD11A0A0J9YXS1 SNORA27.2-201ENST00000363365 126 ntBASIC-0.68□□□□□ -2.52
NPHP3-ACAD11A0A0J9YXS1 RNU6-431P-201ENST00000383874 107 ntBASIC-0.68□□□□□ -2.52
NPHP3-ACAD11A0A0J9YXS1 RPL35AP4-201ENST00000412007 102 ntBASIC-0.68□□□□□ -2.52
NPHP3-ACAD11A0A0J9YXS1 RNU6-808P-201ENST00000391233 108 ntBASIC-0.69□□□□□ -2.52
NPHP3-ACAD11A0A0J9YXS1 MIR1468-201ENST00000410600 86 ntBASIC-0.69□□□□□ -2.52
NPHP3-ACAD11A0A0J9YXS1 SNORD64-201ENST00000386683 67 ntBASIC-0.7□□□□□ -2.52
NPHP3-ACAD11A0A0J9YXS1 SNORD45.2-201ENST00000363552 72 ntBASIC-0.72□□□□□ -2.52
NPHP3-ACAD11A0A0J9YXS1 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.72□□□□□ -2.52
NPHP3-ACAD11A0A0J9YXS1 MIR101-1-201ENST00000362265 75 ntBASIC-0.74□□□□□ -2.53
NPHP3-ACAD11A0A0J9YXS1 RNU6-141P-201ENST00000410499 105 ntBASIC-0.74□□□□□ -2.53
NPHP3-ACAD11A0A0J9YXS1 Y_RNA.379-201ENST00000365653 102 ntBASIC-0.75□□□□□ -2.53
NPHP3-ACAD11A0A0J9YXS1 MIR4636-201ENST00000582271 80 ntBASIC-0.75□□□□□ -2.53
NPHP3-ACAD11A0A0J9YXS1 MIR4493-201ENST00000584016 73 ntBASIC-0.75□□□□□ -2.53
NPHP3-ACAD11A0A0J9YXS1 RNA5SP26-201ENST00000362406 119 ntBASIC-0.76□□□□□ -2.53
NPHP3-ACAD11A0A0J9YXS1 SNORD114-25-201ENST00000363742 72 ntBASIC-0.76□□□□□ -2.53
NPHP3-ACAD11A0A0J9YXS1 Y_RNA.603-201ENST00000410571 108 ntBASIC-0.76□□□□□ -2.53
NPHP3-ACAD11A0A0J9YXS1 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.76□□□□□ -2.53
NPHP3-ACAD11A0A0J9YXS1 RNA5SP451-201ENST00000410588 110 ntBASIC-0.77□□□□□ -2.53
NPHP3-ACAD11A0A0J9YXS1 RNU6-753P-201ENST00000363926 107 ntBASIC-0.78□□□□□ -2.53
NPHP3-ACAD11A0A0J9YXS1 RNU6-530P-201ENST00000391180 107 ntBASIC-0.79□□□□□ -2.54
NPHP3-ACAD11A0A0J9YXS1 AC090616.4-201ENST00000448026 115 ntBASIC-0.79□□□□□ -2.54
NPHP3-ACAD11A0A0J9YXS1 MIR382-201ENST00000637119 76 ntBASIC-0.79□□□□□ -2.54
NPHP3-ACAD11A0A0J9YXS1 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.81□□□□□ -2.54
NPHP3-ACAD11A0A0J9YXS1 MIR604-201ENST00000384880 94 ntBASIC-0.81□□□□□ -2.54
NPHP3-ACAD11A0A0J9YXS1 MIR29B1-201ENST00000385015 81 ntBASIC-0.81□□□□□ -2.54
NPHP3-ACAD11A0A0J9YXS1 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.82□□□□□ -2.54
NPHP3-ACAD11A0A0J9YXS1 snoU83B.1-201ENST00000517136 88 ntBASIC-0.84□□□□□ -2.54
NPHP3-ACAD11A0A0J9YXS1 RNU6-35P-201ENST00000384530 107 ntBASIC-0.85□□□□□ -2.55
NPHP3-ACAD11A0A0J9YXS1 MIR6818-201ENST00000621576 65 ntBASIC-0.85□□□□□ -2.55
NPHP3-ACAD11A0A0J9YXS1 RNY3P8-201ENST00000411366 126 ntBASIC-0.86□□□□□ -2.55
NPHP3-ACAD11A0A0J9YXS1 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.86□□□□□ -2.55
NPHP3-ACAD11A0A0J9YXS1 RNU6-758P-201ENST00000516292 89 ntBASIC-0.86□□□□□ -2.55
NPHP3-ACAD11A0A0J9YXS1 MIR23C-201ENST00000579846 100 ntBASIC-0.86□□□□□ -2.55
NPHP3-ACAD11A0A0J9YXS1 Z95118.1-201ENST00000421372 247 ntBASIC-0.87□□□□□ -2.55
NPHP3-ACAD11A0A0J9YXS1 MIR196A1-201ENST00000388006 70 ntBASIC-0.88□□□□□ -2.55
NPHP3-ACAD11A0A0J9YXS1 RNU4-88P-201ENST00000411220 86 ntBASIC-0.89□□□□□ -2.55
NPHP3-ACAD11A0A0J9YXS1 MIR3681-201ENST00000580089 72 ntBASIC-0.89□□□□□ -2.55
NPHP3-ACAD11A0A0J9YXS1 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-0.89□□□□□ -2.55
NPHP3-ACAD11A0A0J9YXS1 MIR224-201ENST00000384889 81 ntBASIC-0.9□□□□□ -2.55
NPHP3-ACAD11A0A0J9YXS1 MT-TQ-201ENST00000387372 72 ntBASIC-0.9□□□□□ -2.55
NPHP3-ACAD11A0A0J9YXS1 AL500527.2-201ENST00000454105 95 ntBASIC-0.9□□□□□ -2.55
NPHP3-ACAD11A0A0J9YXS1 MIR202-201ENST00000362219 110 ntBASIC-0.92□□□□□ -2.56
NPHP3-ACAD11A0A0J9YXS1 RNA5SP368-201ENST00000364298 116 ntBASIC-0.92□□□□□ -2.56
NPHP3-ACAD11A0A0J9YXS1 RNU6-742P-201ENST00000365289 107 ntBASIC-0.92□□□□□ -2.56
NPHP3-ACAD11A0A0J9YXS1 RNU6-838P-201ENST00000363399 108 ntBASIC-0.93□□□□□ -2.56
NPHP3-ACAD11A0A0J9YXS1 RNU6-361P-201ENST00000364454 107 ntBASIC-0.93□□□□□ -2.56
NPHP3-ACAD11A0A0J9YXS1 SNORD83B-201ENST00000386745 93 ntBASIC-0.94□□□□□ -2.56
NPHP3-ACAD11A0A0J9YXS1 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.94□□□□□ -2.56
NPHP3-ACAD11A0A0J9YXS1 MIR4426-201ENST00000640330 63 ntBASIC-0.94□□□□□ -2.56
NPHP3-ACAD11A0A0J9YXS1 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.95□□□□□ -2.56
NPHP3-ACAD11A0A0J9YXS1 RNU4-63P-201ENST00000411313 118 ntBASIC-0.95□□□□□ -2.56
NPHP3-ACAD11A0A0J9YXS1 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-0.95□□□□□ -2.56
NPHP3-ACAD11A0A0J9YXS1 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.95□□□□□ -2.56
NPHP3-ACAD11A0A0J9YXS1 RNU6-930P-201ENST00000390938 100 ntBASIC-0.96□□□□□ -2.56
NPHP3-ACAD11A0A0J9YXS1 AC120024.2-201ENST00000576526 175 ntBASIC-0.96□□□□□ -2.56
NPHP3-ACAD11A0A0J9YXS1 MIR548AL-201ENST00000578416 97 ntBASIC-0.96□□□□□ -2.56
NPHP3-ACAD11A0A0J9YXS1 RNU6-164P-201ENST00000364604 103 ntBASIC-0.98□□□□□ -2.57
NPHP3-ACAD11A0A0J9YXS1 SNORA17.4-201ENST00000391287 132 ntBASIC-0.98□□□□□ -2.57
NPHP3-ACAD11A0A0J9YXS1 RNU6-563P-201ENST00000364872 108 ntBASIC-0.99□□□□□ -2.57
NPHP3-ACAD11A0A0J9YXS1 AC018880.2-201ENST00000414265 201 ntBASIC-0.99□□□□□ -2.57
NPHP3-ACAD11A0A0J9YXS1 RNU7-134P-201ENST00000458997 64 ntBASIC-0.99□□□□□ -2.57
NPHP3-ACAD11A0A0J9YXS1 SCARNA17-201ENST00000516183 144 ntBASIC-0.99□□□□□ -2.57
NPHP3-ACAD11A0A0J9YXS1 AC013734.1-201ENST00000619329 111 ntBASIC-0.99□□□□□ -2.57
NPHP3-ACAD11A0A0J9YXS1 SNORD95.1-201ENST00000364099 68 ntBASIC-1.01□□□□□ -2.57
NPHP3-ACAD11A0A0J9YXS1 SNORD60-201ENST00000383903 83 ntBASIC-1.01□□□□□ -2.57
NPHP3-ACAD11A0A0J9YXS1 MIR548F3-201ENST00000408509 87 ntBASIC-1.02□□□□□ -2.57
NPHP3-ACAD11A0A0J9YXS1 RNA5SP25-201ENST00000410815 110 ntBASIC-1.02□□□□□ -2.57
NPHP3-ACAD11A0A0J9YXS1 RNY1P9-201ENST00000532431 109 ntBASIC-1.03□□□□□ -2.57
NPHP3-ACAD11A0A0J9YXS1 RNU6-576P-201ENST00000390854 102 ntBASIC-1.04□□□□□ -2.58
NPHP3-ACAD11A0A0J9YXS1 MIR4499-201ENST00000584834 69 ntBASIC-1.04□□□□□ -2.58
NPHP3-ACAD11A0A0J9YXS1 DLEU2_4.2-201ENST00000616613 58 ntBASIC-1.05□□□□□ -2.58
NPHP3-ACAD11A0A0J9YXS1 uc_338.19-201ENST00000616808 99 ntBASIC-1.05□□□□□ -2.58
NPHP3-ACAD11A0A0J9YXS1 RNU6-300P-201ENST00000459080 104 ntBASIC-1.06□□□□□ -2.58
NPHP3-ACAD11A0A0J9YXS1 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.06□□□□□ -2.58
NPHP3-ACAD11A0A0J9YXS1 RNU6-79P-201ENST00000362511 107 ntBASIC-1.07□□□□□ -2.58
NPHP3-ACAD11A0A0J9YXS1 MIR548N-201ENST00000408742 75 ntBASIC-1.07□□□□□ -2.58
NPHP3-ACAD11A0A0J9YXS1 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.08□□□□□ -2.58
NPHP3-ACAD11A0A0J9YXS1 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.08□□□□□ -2.58
NPHP3-ACAD11A0A0J9YXS1 U6.97-201ENST00000636904 101 ntBASIC-1.08□□□□□ -2.58
NPHP3-ACAD11A0A0J9YXS1 MIR6086-201ENST00000638065 55 ntBASIC-1.08□□□□□ -2.58
NPHP3-ACAD11A0A0J9YXS1 RNU6-1204P-201ENST00000363948 107 ntBASIC-1.09□□□□□ -2.58
NPHP3-ACAD11A0A0J9YXS1 SNORD114-15-201ENST00000364687 72 ntBASIC-1.1□□□□□ -2.59
NPHP3-ACAD11A0A0J9YXS1 RNU6-176P-201ENST00000517196 105 ntBASIC-1.11□□□□□ -2.59
NPHP3-ACAD11A0A0J9YXS1 MIR378F-201ENST00000578143 78 ntBASIC-1.11□□□□□ -2.59
NPHP3-ACAD11A0A0J9YXS1 MIR6874-201ENST00000635894 71 ntBASIC-1.11□□□□□ -2.59
NPHP3-ACAD11A0A0J9YXS1 AC091912.2-201ENST00000624798 167 ntBASIC-1.12□□□□□ -2.59
NPHP3-ACAD11A0A0J9YXS1 MIR581-201ENST00000384895 96 ntBASIC-1.13□□□□□ -2.59
NPHP3-ACAD11A0A0J9YXS1 MIR548H4-201ENST00000408689 111 ntBASIC-1.15□□□□□ -2.59
NPHP3-ACAD11A0A0J9YXS1 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.16□□□□□ -2.6
NPHP3-ACAD11A0A0J9YXS1 MIR4324-201ENST00000584846 72 ntBASIC-1.16□□□□□ -2.6
NPHP3-ACAD11A0A0J9YXS1 MIR545-201ENST00000385085 106 ntBASIC-1.17□□□□□ -2.6
NPHP3-ACAD11A0A0J9YXS1 MIR4317-201ENST00000637586 65 ntBASIC-1.17□□□□□ -2.6
NPHP3-ACAD11A0A0J9YXS1 RNU6-986P-201ENST00000363133 102 ntBASIC-1.18□□□□□ -2.6
NPHP3-ACAD11A0A0J9YXS1 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.18□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 212.1 ms