Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.88□□□□□ -2.27
PCDHB13Q9Y5F0 MIR6866-201ENST00000638146 69 ntBASIC0.86□□□□□ -2.27
PCDHB13Q9Y5F0 RNA5SP62-201ENST00000363457 110 ntBASIC0.85□□□□□ -2.27
PCDHB13Q9Y5F0 RNA5SP121-201ENST00000516537 101 ntBASIC0.85□□□□□ -2.27
PCDHB13Q9Y5F0 AC069113.3-201ENST00000521019 150 ntBASIC0.85□□□□□ -2.27
PCDHB13Q9Y5F0 PVT1_3.1-201ENST00000620853 95 ntBASIC0.85□□□□□ -2.27
PCDHB13Q9Y5F0 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
PCDHB13Q9Y5F0 SNORA26.4-201ENST00000391188 123 ntBASIC0.84□□□□□ -2.27
PCDHB13Q9Y5F0 AL353691.2-201ENST00000443795 59 ntBASIC0.84□□□□□ -2.27
PCDHB13Q9Y5F0 CYP3A137P-201ENST00000562436 69 ntBASIC0.84□□□□□ -2.27
PCDHB13Q9Y5F0 Y_RNA.540-201ENST00000384638 111 ntBASIC0.83□□□□□ -2.28
PCDHB13Q9Y5F0 MIR216A-201ENST00000385063 110 ntBASIC0.83□□□□□ -2.28
PCDHB13Q9Y5F0 MIR146A-201ENST00000385201 99 ntBASIC0.83□□□□□ -2.28
PCDHB13Q9Y5F0 AC244250.2-201ENST00000418731 148 ntBASIC0.83□□□□□ -2.28
PCDHB13Q9Y5F0 MIR6779-201ENST00000617283 64 ntBASIC0.82□□□□□ -2.28
PCDHB13Q9Y5F0 MIR4280-201ENST00000582178 76 ntBASIC0.81□□□□□ -2.28
PCDHB13Q9Y5F0 RN7SL793P-201ENST00000583259 296 ntBASIC0.81□□□□□ -2.28
PCDHB13Q9Y5F0 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
PCDHB13Q9Y5F0 SNORD60-201ENST00000383903 83 ntBASIC0.8□□□□□ -2.28
PCDHB13Q9Y5F0 AL445193.1-201ENST00000441183 141 ntBASIC0.8□□□□□ -2.28
PCDHB13Q9Y5F0 MIR4743-201ENST00000584576 69 ntBASIC0.8□□□□□ -2.28
PCDHB13Q9Y5F0 MIR6835-201ENST00000621552 64 ntBASIC0.8□□□□□ -2.28
PCDHB13Q9Y5F0 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
PCDHB13Q9Y5F0 SNORD115-33-201ENST00000363723 82 ntBASIC0.78□□□□□ -2.28
PCDHB13Q9Y5F0 SNORD18.2-201ENST00000459604 70 ntBASIC0.78□□□□□ -2.28
PCDHB13Q9Y5F0 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.78□□□□□ -2.28
PCDHB13Q9Y5F0 AC090625.1-201ENST00000357130 210 ntBASIC0.77□□□□□ -2.29
PCDHB13Q9Y5F0 MIR655-201ENST00000362159 97 ntBASIC0.74□□□□□ -2.29
PCDHB13Q9Y5F0 SNORD74.6-201ENST00000364796 70 ntBASIC0.73□□□□□ -2.29
PCDHB13Q9Y5F0 MIR593-201ENST00000384856 100 ntBASIC0.73□□□□□ -2.29
PCDHB13Q9Y5F0 MIR508-201ENST00000384857 115 ntBASIC0.72□□□□□ -2.29
PCDHB13Q9Y5F0 MIR193B-201ENST00000384907 83 ntBASIC0.72□□□□□ -2.29
PCDHB13Q9Y5F0 MIR610-201ENST00000385139 96 ntBASIC0.72□□□□□ -2.29
PCDHB13Q9Y5F0 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.72□□□□□ -2.29
PCDHB13Q9Y5F0 MIR548N-201ENST00000408742 75 ntBASIC0.72□□□□□ -2.29
PCDHB13Q9Y5F0 MIR4714-201ENST00000580728 77 ntBASIC0.72□□□□□ -2.29
PCDHB13Q9Y5F0 MIR6851-201ENST00000617060 67 ntBASIC0.72□□□□□ -2.29
PCDHB13Q9Y5F0 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.72□□□□□ -2.29
PCDHB13Q9Y5F0 RNU6-1327P-201ENST00000365302 105 ntBASIC0.71□□□□□ -2.3
PCDHB13Q9Y5F0 RNU7-165P-201ENST00000458864 60 ntBASIC0.71□□□□□ -2.3
PCDHB13Q9Y5F0 RNA5SP436-201ENST00000516020 115 ntBASIC0.71□□□□□ -2.3
PCDHB13Q9Y5F0 SNORD38.3-201ENST00000516599 73 ntBASIC0.71□□□□□ -2.3
PCDHB13Q9Y5F0 MIR4315-1-201ENST00000636800 73 ntBASIC0.71□□□□□ -2.3
PCDHB13Q9Y5F0 MIR4315-2-201ENST00000640925 73 ntBASIC0.71□□□□□ -2.3
PCDHB13Q9Y5F0 MIR1273G-201ENST00000577677 100 ntBASIC0.69□□□□□ -2.3
PCDHB13Q9Y5F0 MIR6513-201ENST00000621188 64 ntBASIC0.69□□□□□ -2.3
PCDHB13Q9Y5F0 SNORD114-23-201ENST00000363536 72 ntBASIC0.68□□□□□ -2.3
PCDHB13Q9Y5F0 RNU7-159P-201ENST00000459284 62 ntBASIC0.67□□□□□ -2.3
PCDHB13Q9Y5F0 RNA5SP347-201ENST00000362445 119 ntBASIC0.66□□□□□ -2.3
PCDHB13Q9Y5F0 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC0.66□□□□□ -2.3
PCDHB13Q9Y5F0 MIR5087-201ENST00000635826 76 ntBASIC0.66□□□□□ -2.3
PCDHB13Q9Y5F0 AC010487.4-201ENST00000637027 61 ntBASIC0.65□□□□□ -2.31
PCDHB13Q9Y5F0 MIR145-201ENST00000384967 88 ntBASIC0.64□□□□□ -2.31
PCDHB13Q9Y5F0 Y_RNA.382-201ENST00000365672 114 ntBASIC0.63□□□□□ -2.31
PCDHB13Q9Y5F0 MIR92A1-201ENST00000385233 78 ntBASIC0.63□□□□□ -2.31
PCDHB13Q9Y5F0 MIR936-201ENST00000401264 98 ntBASIC0.62□□□□□ -2.31
PCDHB13Q9Y5F0 RPL35AP4-201ENST00000412007 102 ntBASIC0.62□□□□□ -2.31
PCDHB13Q9Y5F0 MIR924-201ENST00000638017 53 ntBASIC0.62□□□□□ -2.31
PCDHB13Q9Y5F0 MIR518B-201ENST00000385127 83 ntBASIC0.61□□□□□ -2.31
PCDHB13Q9Y5F0 SNORD22.1-201ENST00000516331 125 ntBASIC0.6□□□□□ -2.31
PCDHB13Q9Y5F0 Y_RNA.134-201ENST00000363435 105 ntBASIC0.58□□□□□ -2.32
PCDHB13Q9Y5F0 RNA5SP499-201ENST00000363982 119 ntBASIC0.57□□□□□ -2.32
PCDHB13Q9Y5F0 SNORD49B-201ENST00000365172 72 ntBASIC0.57□□□□□ -2.32
PCDHB13Q9Y5F0 RNU6-46P-201ENST00000383860 107 ntBASIC0.57□□□□□ -2.32
PCDHB13Q9Y5F0 SNORD115.2-201ENST00000391126 59 ntBASIC0.57□□□□□ -2.32
PCDHB13Q9Y5F0 Y_RNA.603-201ENST00000410571 108 ntBASIC0.57□□□□□ -2.32
PCDHB13Q9Y5F0 MIR23C-201ENST00000579846 100 ntBASIC0.57□□□□□ -2.32
PCDHB13Q9Y5F0 AC013734.1-201ENST00000619329 111 ntBASIC0.57□□□□□ -2.32
PCDHB13Q9Y5F0 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.57□□□□□ -2.32
PCDHB13Q9Y5F0 Y_RNA.129-201ENST00000363392 110 ntBASIC0.56□□□□□ -2.32
PCDHB13Q9Y5F0 SNORD114-17-201ENST00000364699 75 ntBASIC0.56□□□□□ -2.32
PCDHB13Q9Y5F0 RNA5SP457-201ENST00000363657 124 ntBASIC0.55□□□□□ -2.32
PCDHB13Q9Y5F0 MIR507-201ENST00000385234 94 ntBASIC0.55□□□□□ -2.32
PCDHB13Q9Y5F0 RNA5SP66-201ENST00000517178 101 ntBASIC0.55□□□□□ -2.32
PCDHB13Q9Y5F0 MIR581-201ENST00000384895 96 ntBASIC0.54□□□□□ -2.32
PCDHB13Q9Y5F0 SNORD75.1-201ENST00000408373 60 ntBASIC0.54□□□□□ -2.32
PCDHB13Q9Y5F0 RNA5SP214-201ENST00000363378 118 ntBASIC0.53□□□□□ -2.32
PCDHB13Q9Y5F0 Y_RNA.115-201ENST00000363272 98 ntBASIC0.52□□□□□ -2.33
PCDHB13Q9Y5F0 Y_RNA.223-201ENST00000364290 113 ntBASIC0.52□□□□□ -2.33
PCDHB13Q9Y5F0 Y_RNA.320-201ENST00000365144 102 ntBASIC0.52□□□□□ -2.33
PCDHB13Q9Y5F0 Y_RNA.374-201ENST00000365606 101 ntBASIC0.52□□□□□ -2.33
PCDHB13Q9Y5F0 MIR4711-201ENST00000578274 70 ntBASIC0.52□□□□□ -2.33
PCDHB13Q9Y5F0 AC114737.2-201ENST00000421583 173 ntBASIC0.51□□□□□ -2.33
PCDHB13Q9Y5F0 MIR8087-201ENST00000612745 78 ntBASIC0.51□□□□□ -2.33
PCDHB13Q9Y5F0 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC0.51□□□□□ -2.33
PCDHB13Q9Y5F0 AC093726.3-201ENST00000637588 150 ntBASIC0.51□□□□□ -2.33
PCDHB13Q9Y5F0 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
PCDHB13Q9Y5F0 RNA5SP193-201ENST00000410353 107 ntBASIC0.49□□□□□ -2.33
PCDHB13Q9Y5F0 RNA5SP67-201ENST00000516422 131 ntBASIC0.49□□□□□ -2.33
PCDHB13Q9Y5F0 RNU6-68P-201ENST00000516576 104 ntBASIC0.49□□□□□ -2.33
PCDHB13Q9Y5F0 Y_RNA.30-201ENST00000362572 97 ntBASIC0.48□□□□□ -2.33
PCDHB13Q9Y5F0 SNORD114-5-201ENST00000362928 70 ntBASIC0.48□□□□□ -2.33
PCDHB13Q9Y5F0 SNORA50A-201ENST00000384225 134 ntBASIC0.48□□□□□ -2.33
PCDHB13Q9Y5F0 AL590491.3-201ENST00000610731 82 ntBASIC0.48□□□□□ -2.33
PCDHB13Q9Y5F0 AP000533.3-201ENST00000447704 118 ntBASIC0.47□□□□□ -2.33
PCDHB13Q9Y5F0 SNORA62.5-201ENST00000516634 120 ntBASIC0.47□□□□□ -2.33
PCDHB13Q9Y5F0 MIR330-201ENST00000362196 94 ntBASIC0.46□□□□□ -2.34
PCDHB13Q9Y5F0 RNU6-929P-201ENST00000384429 107 ntBASIC0.46□□□□□ -2.34
PCDHB13Q9Y5F0 U6.97-201ENST00000636904 101 ntBASIC0.46□□□□□ -2.34
PCDHB13Q9Y5F0 SNORD114-9-201ENST00000364370 72 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms