Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AC093726.3-201ENST00000637588 150 ntBASIC-0.24□□□□□ -2.45
DKK3Q9UBP4 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.25□□□□□ -2.45
DKK3Q9UBP4 AL445193.1-201ENST00000441183 141 ntBASIC-0.25□□□□□ -2.45
DKK3Q9UBP4 MIR8068-201ENST00000618032 68 ntBASIC-0.25□□□□□ -2.45
DKK3Q9UBP4 SNORD74.6-201ENST00000364796 70 ntBASIC-0.26□□□□□ -2.45
DKK3Q9UBP4 MIR4788-201ENST00000639104 80 ntBASIC-0.26□□□□□ -2.45
DKK3Q9UBP4 MIR527-201ENST00000385244 85 ntBASIC-0.27□□□□□ -2.45
DKK3Q9UBP4 RNU4-63P-201ENST00000411313 118 ntBASIC-0.27□□□□□ -2.45
DKK3Q9UBP4 RNU6-320P-201ENST00000516511 106 ntBASIC-0.27□□□□□ -2.45
DKK3Q9UBP4 SNORA13-201ENST00000458790 133 ntBASIC-0.28□□□□□ -2.45
DKK3Q9UBP4 MIR429-201ENST00000362106 83 ntBASIC-0.29□□□□□ -2.46
DKK3Q9UBP4 SNORA25.5-201ENST00000363782 126 ntBASIC-0.29□□□□□ -2.46
DKK3Q9UBP4 RNU6-924P-201ENST00000362926 108 ntBASIC-0.3□□□□□ -2.46
DKK3Q9UBP4 SNORD116-16-201ENST00000384533 92 ntBASIC-0.3□□□□□ -2.46
DKK3Q9UBP4 SNORD38.3-201ENST00000516599 73 ntBASIC-0.3□□□□□ -2.46
DKK3Q9UBP4 SNORA41B-201ENST00000384785 128 ntBASIC-0.31□□□□□ -2.46
DKK3Q9UBP4 RNA5SP275-201ENST00000363936 118 ntBASIC-0.32□□□□□ -2.46
DKK3Q9UBP4 RNU6-669P-201ENST00000365575 107 ntBASIC-0.32□□□□□ -2.46
DKK3Q9UBP4 RNU6-458P-201ENST00000384179 107 ntBASIC-0.32□□□□□ -2.46
DKK3Q9UBP4 MIR518B-201ENST00000385127 83 ntBASIC-0.32□□□□□ -2.46
DKK3Q9UBP4 AC110620.1-201ENST00000416042 228 ntBASIC-0.32□□□□□ -2.46
DKK3Q9UBP4 U6.58-201ENST00000613107 107 ntBASIC-0.32□□□□□ -2.46
DKK3Q9UBP4 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.33□□□□□ -2.46
DKK3Q9UBP4 RNU6-246P-201ENST00000384702 107 ntBASIC-0.33□□□□□ -2.46
DKK3Q9UBP4 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.33□□□□□ -2.46
DKK3Q9UBP4 SNORD60.1-201ENST00000362451 73 ntBASIC-0.34□□□□□ -2.46
DKK3Q9UBP4 SNORD14C-201ENST00000365382 88 ntBASIC-0.34□□□□□ -2.46
DKK3Q9UBP4 MIR124-2-201ENST00000385081 109 ntBASIC-0.34□□□□□ -2.46
DKK3Q9UBP4 RNU6-122P-201ENST00000516818 107 ntBASIC-0.34□□□□□ -2.46
DKK3Q9UBP4 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.35□□□□□ -2.47
DKK3Q9UBP4 RNU6-940P-201ENST00000363433 104 ntBASIC-0.35□□□□□ -2.47
DKK3Q9UBP4 SNORD114-11-201ENST00000363738 75 ntBASIC-0.35□□□□□ -2.47
DKK3Q9UBP4 RNA5SP192-201ENST00000364404 120 ntBASIC-0.35□□□□□ -2.47
DKK3Q9UBP4 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.35□□□□□ -2.47
DKK3Q9UBP4 AC125388.1-201ENST00000459631 156 ntBASIC-0.35□□□□□ -2.47
DKK3Q9UBP4 MIR204-201ENST00000385200 110 ntBASIC-0.36□□□□□ -2.47
DKK3Q9UBP4 SNORD126-201ENST00000459475 77 ntBASIC-0.36□□□□□ -2.47
DKK3Q9UBP4 MIR601-201ENST00000385256 79 ntBASIC-0.37□□□□□ -2.47
DKK3Q9UBP4 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-0.37□□□□□ -2.47
DKK3Q9UBP4 Y_RNA.340-201ENST00000365330 92 ntBASIC-0.38□□□□□ -2.47
DKK3Q9UBP4 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.38□□□□□ -2.47
DKK3Q9UBP4 SNORD22.1-201ENST00000516331 125 ntBASIC-0.38□□□□□ -2.47
DKK3Q9UBP4 SNORA32.3-201ENST00000384772 121 ntBASIC-0.39□□□□□ -2.47
DKK3Q9UBP4 MIR196A2-201ENST00000385189 110 ntBASIC-0.39□□□□□ -2.47
DKK3Q9UBP4 RNU6-788P-201ENST00000390967 104 ntBASIC-0.39□□□□□ -2.47
DKK3Q9UBP4 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.39□□□□□ -2.47
DKK3Q9UBP4 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.4□□□□□ -2.47
DKK3Q9UBP4 RNA5SP169-201ENST00000517268 117 ntBASIC-0.4□□□□□ -2.47
DKK3Q9UBP4 MIR3681-201ENST00000580089 72 ntBASIC-0.4□□□□□ -2.47
DKK3Q9UBP4 RNU6-696P-201ENST00000390834 107 ntBASIC-0.41□□□□□ -2.48
DKK3Q9UBP4 SNORD75.1-201ENST00000408373 60 ntBASIC-0.41□□□□□ -2.48
DKK3Q9UBP4 SNORD18.2-201ENST00000459604 70 ntBASIC-0.41□□□□□ -2.48
DKK3Q9UBP4 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.41□□□□□ -2.48
DKK3Q9UBP4 U7.5-201ENST00000517224 61 ntBASIC-0.41□□□□□ -2.48
DKK3Q9UBP4 MIR3179-1-201ENST00000578940 84 ntBASIC-0.41□□□□□ -2.48
DKK3Q9UBP4 MIR3179-2-201ENST00000579107 84 ntBASIC-0.41□□□□□ -2.48
DKK3Q9UBP4 MIR3179-3-201ENST00000579566 84 ntBASIC-0.41□□□□□ -2.48
DKK3Q9UBP4 MIR548AZ-201ENST00000616567 95 ntBASIC-0.41□□□□□ -2.48
DKK3Q9UBP4 MIR3179-4-201ENST00000617599 84 ntBASIC-0.41□□□□□ -2.48
DKK3Q9UBP4 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.42□□□□□ -2.48
DKK3Q9UBP4 MT-TQ-201ENST00000387372 72 ntBASIC-0.42□□□□□ -2.48
DKK3Q9UBP4 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.43□□□□□ -2.48
DKK3Q9UBP4 RNU6-284P-201ENST00000411105 106 ntBASIC-0.43□□□□□ -2.48
DKK3Q9UBP4 U4.2-201ENST00000618561 85 ntBASIC-0.43□□□□□ -2.48
DKK3Q9UBP4 RNU6-598P-201ENST00000364017 105 ntBASIC-0.44□□□□□ -2.48
DKK3Q9UBP4 AC021146.6-201ENST00000514659 117 ntBASIC-0.44□□□□□ -2.48
DKK3Q9UBP4 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.44□□□□□ -2.48
DKK3Q9UBP4 MIR466-201ENST00000580653 84 ntBASIC-0.44□□□□□ -2.48
DKK3Q9UBP4 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.45□□□□□ -2.48
DKK3Q9UBP4 MIR3938-201ENST00000582157 103 ntBASIC-0.45□□□□□ -2.48
DKK3Q9UBP4 SNORD114-14-201ENST00000362723 75 ntBASIC-0.46□□□□□ -2.48
DKK3Q9UBP4 SNORD1B-201ENST00000363091 84 ntBASIC-0.46□□□□□ -2.48
DKK3Q9UBP4 RNU6-721P-201ENST00000410155 105 ntBASIC-0.46□□□□□ -2.48
DKK3Q9UBP4 RNU7-88P-201ENST00000458752 63 ntBASIC-0.46□□□□□ -2.48
DKK3Q9UBP4 MIR198-201ENST00000637333 62 ntBASIC-0.46□□□□□ -2.48
DKK3Q9UBP4 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.47□□□□□ -2.48
DKK3Q9UBP4 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.47□□□□□ -2.48
DKK3Q9UBP4 MIR1207-201ENST00000408249 87 ntBASIC-0.48□□□□□ -2.49
DKK3Q9UBP4 AP000533.3-201ENST00000447704 118 ntBASIC-0.48□□□□□ -2.49
DKK3Q9UBP4 RNU6-732P-201ENST00000516033 103 ntBASIC-0.48□□□□□ -2.49
DKK3Q9UBP4 SNORA26.4-201ENST00000391188 123 ntBASIC-0.49□□□□□ -2.49
DKK3Q9UBP4 SNORD115-33-201ENST00000363723 82 ntBASIC-0.5□□□□□ -2.49
DKK3Q9UBP4 MIR548AA1-201ENST00000384971 97 ntBASIC-0.5□□□□□ -2.49
DKK3Q9UBP4 SNORD63.1-201ENST00000516178 80 ntBASIC-0.5□□□□□ -2.49
DKK3Q9UBP4 MIR587-201ENST00000384845 96 ntBASIC-0.51□□□□□ -2.49
DKK3Q9UBP4 RNU6-172P-201ENST00000411000 93 ntBASIC-0.51□□□□□ -2.49
DKK3Q9UBP4 RNU7-119P-201ENST00000459279 63 ntBASIC-0.51□□□□□ -2.49
DKK3Q9UBP4 RNU6-231P-201ENST00000517122 103 ntBASIC-0.51□□□□□ -2.49
DKK3Q9UBP4 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.51□□□□□ -2.49
DKK3Q9UBP4 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.51□□□□□ -2.49
DKK3Q9UBP4 MIR4320-201ENST00000636981 65 ntBASIC-0.51□□□□□ -2.49
DKK3Q9UBP4 MIR7110-201ENST00000612638 86 ntBASIC-0.52□□□□□ -2.49
DKK3Q9UBP4 U2.18-201ENST00000622185 84 ntBASIC-0.52□□□□□ -2.49
DKK3Q9UBP4 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.53□□□□□ -2.49
DKK3Q9UBP4 RNU6-520P-201ENST00000384717 104 ntBASIC-0.53□□□□□ -2.49
DKK3Q9UBP4 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.53□□□□□ -2.49
DKK3Q9UBP4 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.53□□□□□ -2.49
DKK3Q9UBP4 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.53□□□□□ -2.49
DKK3Q9UBP4 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.54□□□□□ -2.5
DKK3Q9UBP4 SNORA3B-201ENST00000391305 131 ntBASIC-0.54□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 249.7 ms