Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 RNU4-88P-201ENST00000411220 86 ntBASIC-1.84□□□□□ -2.7
BLOC1S4Q9NUP1 MIR3123-201ENST00000583417 75 ntBASIC-1.84□□□□□ -2.7
BLOC1S4Q9NUP1 MIR548AM-201ENST00000584298 74 ntBASIC-1.84□□□□□ -2.7
BLOC1S4Q9NUP1 U2.7-201ENST00000619197 100 ntBASIC-1.84□□□□□ -2.7
BLOC1S4Q9NUP1 RNU6-608P-201ENST00000383927 104 ntBASIC-1.85□□□□□ -2.71
BLOC1S4Q9NUP1 RNU6-497P-201ENST00000365316 104 ntBASIC-1.86□□□□□ -2.71
BLOC1S4Q9NUP1 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.86□□□□□ -2.71
BLOC1S4Q9NUP1 MIR1468-201ENST00000410600 86 ntBASIC-1.86□□□□□ -2.71
BLOC1S4Q9NUP1 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.86□□□□□ -2.71
BLOC1S4Q9NUP1 RNU6-841P-201ENST00000383872 107 ntBASIC-1.87□□□□□ -2.71
BLOC1S4Q9NUP1 RNU6-129P-201ENST00000391022 107 ntBASIC-1.87□□□□□ -2.71
BLOC1S4Q9NUP1 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.87□□□□□ -2.71
BLOC1S4Q9NUP1 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.87□□□□□ -2.71
BLOC1S4Q9NUP1 RNU6-563P-201ENST00000364872 108 ntBASIC-1.88□□□□□ -2.71
BLOC1S4Q9NUP1 SNORD114-3-201ENST00000364969 75 ntBASIC-1.88□□□□□ -2.71
BLOC1S4Q9NUP1 SNORA8.1-201ENST00000384250 140 ntBASIC-1.88□□□□□ -2.71
BLOC1S4Q9NUP1 MIR548C-201ENST00000384815 97 ntBASIC-1.88□□□□□ -2.71
BLOC1S4Q9NUP1 MIR496-201ENST00000385226 102 ntBASIC-1.88□□□□□ -2.71
BLOC1S4Q9NUP1 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.88□□□□□ -2.71
BLOC1S4Q9NUP1 MIR1297-201ENST00000637311 77 ntBASIC-1.88□□□□□ -2.71
BLOC1S4Q9NUP1 MIR520D-201ENST00000385002 87 ntBASIC-1.89□□□□□ -2.71
BLOC1S4Q9NUP1 AL603908.1-201ENST00000406098 201 ntBASIC-1.9□□□□□ -2.71
BLOC1S4Q9NUP1 AC074348.1-201ENST00000426503 132 ntBASIC-1.9□□□□□ -2.71
BLOC1S4Q9NUP1 AL606753.1-201ENST00000427435 87 ntBASIC-1.9□□□□□ -2.71
BLOC1S4Q9NUP1 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.91□□□□□ -2.72
BLOC1S4Q9NUP1 RNU6-267P-201ENST00000516714 103 ntBASIC-1.91□□□□□ -2.72
BLOC1S4Q9NUP1 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.92□□□□□ -2.72
BLOC1S4Q9NUP1 RNU6-194P-201ENST00000363862 105 ntBASIC-1.92□□□□□ -2.72
BLOC1S4Q9NUP1 MT-TM-201ENST00000387377 68 ntBASIC-1.92□□□□□ -2.72
BLOC1S4Q9NUP1 RNU6-919P-201ENST00000516731 104 ntBASIC-1.92□□□□□ -2.72
BLOC1S4Q9NUP1 RNU6-789P-201ENST00000517105 102 ntBASIC-1.92□□□□□ -2.72
BLOC1S4Q9NUP1 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.92□□□□□ -2.72
BLOC1S4Q9NUP1 RNU6-478P-201ENST00000363904 110 ntBASIC-1.93□□□□□ -2.72
BLOC1S4Q9NUP1 MIR548Q-201ENST00000408404 100 ntBASIC-1.93□□□□□ -2.72
BLOC1S4Q9NUP1 AC006160.2-201ENST00000637708 154 ntBASIC-1.93□□□□□ -2.72
BLOC1S4Q9NUP1 RNU6-675P-201ENST00000384236 104 ntBASIC-1.94□□□□□ -2.72
BLOC1S4Q9NUP1 RNU6-844P-201ENST00000517175 102 ntBASIC-1.94□□□□□ -2.72
BLOC1S4Q9NUP1 MIR429-201ENST00000362106 83 ntBASIC-1.95□□□□□ -2.72
BLOC1S4Q9NUP1 SNORD115-31-201ENST00000365318 82 ntBASIC-1.95□□□□□ -2.72
BLOC1S4Q9NUP1 AC120024.2-201ENST00000576526 175 ntBASIC-1.95□□□□□ -2.72
BLOC1S4Q9NUP1 RNU6-630P-201ENST00000391258 106 ntBASIC-1.96□□□□□ -2.72
BLOC1S4Q9NUP1 RNU6-330P-201ENST00000363015 107 ntBASIC-1.97□□□□□ -2.72
BLOC1S4Q9NUP1 SNORD45.1-201ENST00000363181 77 ntBASIC-1.97□□□□□ -2.72
BLOC1S4Q9NUP1 RNU6-640P-201ENST00000363693 105 ntBASIC-1.97□□□□□ -2.72
BLOC1S4Q9NUP1 RNU6-215P-201ENST00000365169 102 ntBASIC-1.97□□□□□ -2.72
BLOC1S4Q9NUP1 RNU6-147P-201ENST00000383983 107 ntBASIC-1.97□□□□□ -2.72
BLOC1S4Q9NUP1 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.97□□□□□ -2.72
BLOC1S4Q9NUP1 RNU6-258P-201ENST00000390884 101 ntBASIC-1.97□□□□□ -2.72
BLOC1S4Q9NUP1 RNU6-604P-201ENST00000390917 100 ntBASIC-1.97□□□□□ -2.72
BLOC1S4Q9NUP1 MIR488-201ENST00000365739 83 ntBASIC-1.98□□□□□ -2.73
BLOC1S4Q9NUP1 MIR548W-201ENST00000581970 74 ntBASIC-1.98□□□□□ -2.73
BLOC1S4Q9NUP1 SNORA63.4-201ENST00000362763 126 ntBASIC-1.99□□□□□ -2.73
BLOC1S4Q9NUP1 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.99□□□□□ -2.73
BLOC1S4Q9NUP1 RNU6-119P-201ENST00000364882 107 ntBASIC-2□□□□□ -2.73
BLOC1S4Q9NUP1 MTND4LP1-201ENST00000446263 157 ntBASIC-2□□□□□ -2.73
BLOC1S4Q9NUP1 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2□□□□□ -2.73
BLOC1S4Q9NUP1 RNU7-174P-201ENST00000516248 59 ntBASIC-2.01□□□□□ -2.73
BLOC1S4Q9NUP1 Y_RNA.74-201ENST00000362911 99 ntBASIC-2.02□□□□□ -2.73
BLOC1S4Q9NUP1 Y_RNA.607-201ENST00000410597 98 ntBASIC-2.02□□□□□ -2.73
BLOC1S4Q9NUP1 Y_RNA.684-201ENST00000516510 99 ntBASIC-2.02□□□□□ -2.73
BLOC1S4Q9NUP1 MIR8053-201ENST00000613344 75 ntBASIC-2.02□□□□□ -2.73
BLOC1S4Q9NUP1 RNU6-1134P-201ENST00000365156 101 ntBASIC-2.03□□□□□ -2.73
BLOC1S4Q9NUP1 SNORD20-201ENST00000384550 80 ntBASIC-2.03□□□□□ -2.73
BLOC1S4Q9NUP1 snoU13.10-201ENST00000459301 103 ntBASIC-2.03□□□□□ -2.73
BLOC1S4Q9NUP1 MIR4748-201ENST00000578076 82 ntBASIC-2.03□□□□□ -2.73
BLOC1S4Q9NUP1 Y_RNA.236-201ENST00000364427 111 ntBASIC-2.05□□□□□ -2.74
BLOC1S4Q9NUP1 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.05□□□□□ -2.74
BLOC1S4Q9NUP1 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.05□□□□□ -2.74
BLOC1S4Q9NUP1 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-2.05□□□□□ -2.74
BLOC1S4Q9NUP1 RNU6-1267P-201ENST00000410747 107 ntBASIC-2.05□□□□□ -2.74
BLOC1S4Q9NUP1 RNU6-1262P-201ENST00000516217 96 ntBASIC-2.05□□□□□ -2.74
BLOC1S4Q9NUP1 AC013734.1-201ENST00000619329 111 ntBASIC-2.05□□□□□ -2.74
BLOC1S4Q9NUP1 Y_RNA.17-201ENST00000362433 111 ntBASIC-2.06□□□□□ -2.74
BLOC1S4Q9NUP1 RNU6-315P-201ENST00000362666 107 ntBASIC-2.06□□□□□ -2.74
BLOC1S4Q9NUP1 MIR548AI-201ENST00000579940 88 ntBASIC-2.06□□□□□ -2.74
BLOC1S4Q9NUP1 IGLL4P-201ENST00000614590 133 ntBASIC-2.06□□□□□ -2.74
BLOC1S4Q9NUP1 RNU6-698P-201ENST00000363523 107 ntBASIC-2.07□□□□□ -2.74
BLOC1S4Q9NUP1 RNU6-34P-201ENST00000364874 107 ntBASIC-2.07□□□□□ -2.74
BLOC1S4Q9NUP1 RNU6-458P-201ENST00000384179 107 ntBASIC-2.07□□□□□ -2.74
BLOC1S4Q9NUP1 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.07□□□□□ -2.74
BLOC1S4Q9NUP1 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.07□□□□□ -2.74
BLOC1S4Q9NUP1 U6.58-201ENST00000613107 107 ntBASIC-2.07□□□□□ -2.74
BLOC1S4Q9NUP1 RNU6-982P-201ENST00000516216 102 ntBASIC-2.08□□□□□ -2.74
BLOC1S4Q9NUP1 MIR466-201ENST00000580653 84 ntBASIC-2.08□□□□□ -2.74
BLOC1S4Q9NUP1 RNU6-598P-201ENST00000364017 105 ntBASIC-2.09□□□□□ -2.74
BLOC1S4Q9NUP1 RNU6-696P-201ENST00000390834 107 ntBASIC-2.09□□□□□ -2.74
BLOC1S4Q9NUP1 Y_RNA.219-201ENST00000364232 113 ntBASIC-2.1□□□□□ -2.75
BLOC1S4Q9NUP1 Y_RNA.532-201ENST00000384590 113 ntBASIC-2.1□□□□□ -2.75
BLOC1S4Q9NUP1 MIR23C-201ENST00000579846 100 ntBASIC-2.1□□□□□ -2.75
BLOC1S4Q9NUP1 MIR4484-201ENST00000582855 83 ntBASIC-2.1□□□□□ -2.75
BLOC1S4Q9NUP1 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.1□□□□□ -2.75
BLOC1S4Q9NUP1 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.1□□□□□ -2.75
BLOC1S4Q9NUP1 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.1□□□□□ -2.75
BLOC1S4Q9NUP1 RNU6-1094P-201ENST00000362416 104 ntBASIC-2.11□□□□□ -2.75
BLOC1S4Q9NUP1 RNA5SP93-201ENST00000362525 114 ntBASIC-2.11□□□□□ -2.75
BLOC1S4Q9NUP1 RNA5SP215-201ENST00000363440 122 ntBASIC-2.11□□□□□ -2.75
BLOC1S4Q9NUP1 RNY1P1-201ENST00000364372 112 ntBASIC-2.11□□□□□ -2.75
BLOC1S4Q9NUP1 RNU6-1152P-201ENST00000384576 107 ntBASIC-2.11□□□□□ -2.75
BLOC1S4Q9NUP1 MIR1207-201ENST00000408249 87 ntBASIC-2.11□□□□□ -2.75
BLOC1S4Q9NUP1 snoMBII-202.2-201ENST00000517263 86 ntBASIC-2.11□□□□□ -2.75
Retrieved 100 of 98,524 protein–RNA pairs in 165.5 ms