Protein–RNA interactions for Protein: Q9H3S1

SEMA4A, Semaphorin-4A, humanhuman

Predictions only

Length 761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4AQ9H3S1 SNORA42.1-201ENST00000363515 137 ntBASIC0.27□□□□□ -2.37
SEMA4AQ9H3S1 RNU6-696P-201ENST00000390834 107 ntBASIC0.27□□□□□ -2.37
SEMA4AQ9H3S1 RNA5SP25-201ENST00000410815 110 ntBASIC0.27□□□□□ -2.37
SEMA4AQ9H3S1 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.27□□□□□ -2.37
SEMA4AQ9H3S1 MIR548X-201ENST00000580069 75 ntBASIC0.27□□□□□ -2.37
SEMA4AQ9H3S1 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC0.27□□□□□ -2.37
SEMA4AQ9H3S1 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.27□□□□□ -2.37
SEMA4AQ9H3S1 RNA5SP214-201ENST00000363378 118 ntBASIC0.26□□□□□ -2.37
SEMA4AQ9H3S1 AC096531.1-201ENST00000419107 107 ntBASIC0.26□□□□□ -2.37
SEMA4AQ9H3S1 MIR5093-201ENST00000583199 100 ntBASIC0.26□□□□□ -2.37
SEMA4AQ9H3S1 Y_RNA.69-201ENST00000362885 109 ntBASIC0.25□□□□□ -2.37
SEMA4AQ9H3S1 Y_RNA.185-201ENST00000363894 100 ntBASIC0.25□□□□□ -2.37
SEMA4AQ9H3S1 MIR610-201ENST00000385139 96 ntBASIC0.25□□□□□ -2.37
SEMA4AQ9H3S1 MIR6854-201ENST00000614935 69 ntBASIC0.25□□□□□ -2.37
SEMA4AQ9H3S1 RNU6-929P-201ENST00000384429 107 ntBASIC0.24□□□□□ -2.37
SEMA4AQ9H3S1 MIR4768-201ENST00000585270 74 ntBASIC0.24□□□□□ -2.37
SEMA4AQ9H3S1 SNORA62.4-201ENST00000365504 151 ntBASIC0.23□□□□□ -2.37
SEMA4AQ9H3S1 MIR548AA1-201ENST00000384971 97 ntBASIC0.23□□□□□ -2.37
SEMA4AQ9H3S1 RNU6-995P-201ENST00000391244 107 ntBASIC0.23□□□□□ -2.37
SEMA4AQ9H3S1 AC114755.3-201ENST00000481111 251 ntBASIC0.23□□□□□ -2.37
SEMA4AQ9H3S1 SNORD57-201ENST00000448188 72 ntBASIC0.22□□□□□ -2.37
SEMA4AQ9H3S1 RNU7-159P-201ENST00000459284 62 ntBASIC0.22□□□□□ -2.37
SEMA4AQ9H3S1 SNORD63.1-201ENST00000516178 80 ntBASIC0.22□□□□□ -2.37
SEMA4AQ9H3S1 RNU6-419P-201ENST00000517030 63 ntBASIC0.22□□□□□ -2.37
SEMA4AQ9H3S1 Y_RNA.139-201ENST00000363464 102 ntBASIC0.21□□□□□ -2.38
SEMA4AQ9H3S1 SNORD114-9-201ENST00000364370 72 ntBASIC0.21□□□□□ -2.38
SEMA4AQ9H3S1 SNORD114-15-201ENST00000364687 72 ntBASIC0.21□□□□□ -2.38
SEMA4AQ9H3S1 RNU7-165P-201ENST00000458864 60 ntBASIC0.21□□□□□ -2.38
SEMA4AQ9H3S1 RNU6-1206P-201ENST00000516339 103 ntBASIC0.21□□□□□ -2.38
SEMA4AQ9H3S1 SNORD38.3-201ENST00000516599 73 ntBASIC0.21□□□□□ -2.38
SEMA4AQ9H3S1 RNU6-1238P-201ENST00000517215 102 ntBASIC0.21□□□□□ -2.38
SEMA4AQ9H3S1 MIR655-201ENST00000362159 97 ntBASIC0.2□□□□□ -2.38
SEMA4AQ9H3S1 MIR148A-201ENST00000362215 68 ntBASIC0.2□□□□□ -2.38
SEMA4AQ9H3S1 RNU6-758P-201ENST00000516292 89 ntBASIC0.2□□□□□ -2.38
SEMA4AQ9H3S1 IGLVI-20-201ENST00000519296 130 ntBASIC0.2□□□□□ -2.38
SEMA4AQ9H3S1 MIR4802-201ENST00000581881 80 ntBASIC0.2□□□□□ -2.38
SEMA4AQ9H3S1 RNU6-30P-201ENST00000384561 107 ntBASIC0.19□□□□□ -2.38
SEMA4AQ9H3S1 MIR548Q-201ENST00000408404 100 ntBASIC0.19□□□□□ -2.38
SEMA4AQ9H3S1 RNU6-930P-201ENST00000390938 100 ntBASIC0.18□□□□□ -2.38
SEMA4AQ9H3S1 RNU6-732P-201ENST00000516033 103 ntBASIC0.18□□□□□ -2.38
SEMA4AQ9H3S1 MIR4280-201ENST00000582178 76 ntBASIC0.18□□□□□ -2.38
SEMA4AQ9H3S1 MIR371B-201ENST00000638082 66 ntBASIC0.18□□□□□ -2.38
SEMA4AQ9H3S1 MIR125B1-201ENST00000385236 88 ntBASIC0.17□□□□□ -2.38
SEMA4AQ9H3S1 MIR1295A-201ENST00000408463 79 ntBASIC0.17□□□□□ -2.38
SEMA4AQ9H3S1 Y_RNA.613-201ENST00000410726 97 ntBASIC0.17□□□□□ -2.38
SEMA4AQ9H3S1 SNORD63.2-201ENST00000516303 64 ntBASIC0.17□□□□□ -2.38
SEMA4AQ9H3S1 MIR3170-201ENST00000582699 77 ntBASIC0.17□□□□□ -2.38
SEMA4AQ9H3S1 SNORD19-201ENST00000391191 68 ntBASIC0.16□□□□□ -2.38
SEMA4AQ9H3S1 RNU7-160P-201ENST00000516660 62 ntBASIC0.16□□□□□ -2.38
SEMA4AQ9H3S1 MTRNR2L9-201ENST00000622562 75 ntBASIC0.15□□□□□ -2.39
SEMA4AQ9H3S1 RNU6-247P-201ENST00000362636 107 ntBASIC0.14□□□□□ -2.39
SEMA4AQ9H3S1 SNORD49B-201ENST00000365172 72 ntBASIC0.14□□□□□ -2.39
SEMA4AQ9H3S1 RNU6-258P-201ENST00000390884 101 ntBASIC0.14□□□□□ -2.39
SEMA4AQ9H3S1 AP002795.1-201ENST00000534879 84 ntBASIC0.14□□□□□ -2.39
SEMA4AQ9H3S1 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.14□□□□□ -2.39
SEMA4AQ9H3S1 RNU6-828P-201ENST00000364876 107 ntBASIC0.13□□□□□ -2.39
SEMA4AQ9H3S1 MIR520D-201ENST00000385002 87 ntBASIC0.13□□□□□ -2.39
SEMA4AQ9H3S1 SNORD18.2-201ENST00000459604 70 ntBASIC0.13□□□□□ -2.39
SEMA4AQ9H3S1 DLEU2_4.2-201ENST00000616613 58 ntBASIC0.13□□□□□ -2.39
SEMA4AQ9H3S1 RNA5SP331-201ENST00000364986 107 ntBASIC0.12□□□□□ -2.39
SEMA4AQ9H3S1 MIR545-201ENST00000385085 106 ntBASIC0.11□□□□□ -2.39
SEMA4AQ9H3S1 SNORD114-31-201ENST00000363219 75 ntBASIC0.1□□□□□ -2.39
SEMA4AQ9H3S1 SNORD114-12-201ENST00000365400 75 ntBASIC0.1□□□□□ -2.39
SEMA4AQ9H3S1 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
SEMA4AQ9H3S1 RNU6-1111P-201ENST00000391118 107 ntBASIC0.1□□□□□ -2.39
SEMA4AQ9H3S1 MIR548F3-201ENST00000408509 87 ntBASIC0.1□□□□□ -2.39
SEMA4AQ9H3S1 RNU6-1233P-201ENST00000362922 102 ntBASIC0.09□□□□□ -2.4
SEMA4AQ9H3S1 RNA5SP368-201ENST00000364298 116 ntBASIC0.09□□□□□ -2.4
SEMA4AQ9H3S1 AL451105.1-201ENST00000450005 189 ntBASIC0.09□□□□□ -2.4
SEMA4AQ9H3S1 AC104692.1-201ENST00000472406 90 ntBASIC0.09□□□□□ -2.4
SEMA4AQ9H3S1 RNA5SP169-201ENST00000517268 117 ntBASIC0.08□□□□□ -2.4
SEMA4AQ9H3S1 MIR6851-201ENST00000617060 67 ntBASIC0.08□□□□□ -2.4
SEMA4AQ9H3S1 RNU6-986P-201ENST00000363133 102 ntBASIC0.07□□□□□ -2.4
SEMA4AQ9H3S1 RNU6-838P-201ENST00000363399 108 ntBASIC0.07□□□□□ -2.4
SEMA4AQ9H3S1 SNORD22.1-201ENST00000516331 125 ntBASIC0.07□□□□□ -2.4
SEMA4AQ9H3S1 RNA5SP67-201ENST00000516422 131 ntBASIC0.07□□□□□ -2.4
SEMA4AQ9H3S1 RNU6-530P-201ENST00000391180 107 ntBASIC0.06□□□□□ -2.4
SEMA4AQ9H3S1 MIR4290-201ENST00000583807 95 ntBASIC0.06□□□□□ -2.4
SEMA4AQ9H3S1 MIR4493-201ENST00000584016 73 ntBASIC0.06□□□□□ -2.4
SEMA4AQ9H3S1 AL590491.3-201ENST00000610731 82 ntBASIC0.06□□□□□ -2.4
SEMA4AQ9H3S1 MIR1295B-201ENST00000636144 60 ntBASIC0.06□□□□□ -2.4
SEMA4AQ9H3S1 RNU6-46P-201ENST00000383860 107 ntBASIC0.05□□□□□ -2.4
SEMA4AQ9H3S1 MIR604-201ENST00000384880 94 ntBASIC0.05□□□□□ -2.4
SEMA4AQ9H3S1 AP001180.6-201ENST00000584918 159 ntBASIC0.05□□□□□ -2.4
SEMA4AQ9H3S1 RNU6-1008P-201ENST00000384160 104 ntBASIC0.04□□□□□ -2.4
SEMA4AQ9H3S1 RNA5SP66-201ENST00000517178 101 ntBASIC0.04□□□□□ -2.4
SEMA4AQ9H3S1 MIR4667-201ENST00000578933 66 ntBASIC0.04□□□□□ -2.4
SEMA4AQ9H3S1 SNORD114-17-201ENST00000364699 75 ntBASIC0.03□□□□□ -2.4
SEMA4AQ9H3S1 MIR29B1-201ENST00000385015 81 ntBASIC0.03□□□□□ -2.4
SEMA4AQ9H3S1 RPL35AP4-201ENST00000412007 102 ntBASIC0.03□□□□□ -2.4
SEMA4AQ9H3S1 SNORD114-11-201ENST00000363738 75 ntBASIC0.02□□□□□ -2.41
SEMA4AQ9H3S1 RNU6-742P-201ENST00000365289 107 ntBASIC0.02□□□□□ -2.41
SEMA4AQ9H3S1 AP000533.3-201ENST00000447704 118 ntBASIC0.01□□□□□ -2.41
SEMA4AQ9H3S1 MIR5683-201ENST00000636514 76 ntBASIC0.01□□□□□ -2.41
SEMA4AQ9H3S1 MIR518B-201ENST00000385127 83 ntBASIC0□□□□□ -2.41
SEMA4AQ9H3S1 AC093726.3-201ENST00000637588 150 ntBASIC0□□□□□ -2.41
SEMA4AQ9H3S1 SNORD114-16-201ENST00000363044 70 ntBASIC-0.01□□□□□ -2.41
SEMA4AQ9H3S1 MIR204-201ENST00000385200 110 ntBASIC-0.01□□□□□ -2.41
SEMA4AQ9H3S1 Y_RNA.699-201ENST00000516803 93 ntBASIC-0.01□□□□□ -2.41
SEMA4AQ9H3S1 MIR548AL-201ENST00000578416 97 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 181 ms