Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 RNU6-351P-201ENST00000516097 100 ntBASIC0.89□□□□□ -2.27
TRIM47Q96LD4 AP002795.1-201ENST00000534879 84 ntBASIC0.89□□□□□ -2.27
TRIM47Q96LD4 uc_338.17-201ENST00000619633 179 ntBASIC0.89□□□□□ -2.27
TRIM47Q96LD4 MIR8087-201ENST00000612745 78 ntBASIC0.88□□□□□ -2.27
TRIM47Q96LD4 RNA5SP257-201ENST00000363023 116 ntBASIC0.87□□□□□ -2.27
TRIM47Q96LD4 RNU6-608P-201ENST00000383927 104 ntBASIC0.87□□□□□ -2.27
TRIM47Q96LD4 MIR4711-201ENST00000578274 70 ntBASIC0.87□□□□□ -2.27
TRIM47Q96LD4 MIR6866-201ENST00000638146 69 ntBASIC0.87□□□□□ -2.27
TRIM47Q96LD4 PSMC1P5-201ENST00000512850 177 ntBASIC0.86□□□□□ -2.27
TRIM47Q96LD4 RNU6-863P-201ENST00000515989 104 ntBASIC0.86□□□□□ -2.27
TRIM47Q96LD4 RNA5SP121-201ENST00000516537 101 ntBASIC0.86□□□□□ -2.27
TRIM47Q96LD4 MIR4653-201ENST00000585107 83 ntBASIC0.86□□□□□ -2.27
TRIM47Q96LD4 MIR6514-201ENST00000622549 70 ntBASIC0.86□□□□□ -2.27
TRIM47Q96LD4 RNA5SP347-201ENST00000362445 119 ntBASIC0.85□□□□□ -2.27
TRIM47Q96LD4 MIR330-201ENST00000362196 94 ntBASIC0.84□□□□□ -2.27
TRIM47Q96LD4 MIR146A-201ENST00000385201 99 ntBASIC0.84□□□□□ -2.27
TRIM47Q96LD4 RNU6-110P-201ENST00000384508 104 ntBASIC0.83□□□□□ -2.28
TRIM47Q96LD4 RNU6-127P-201ENST00000390897 107 ntBASIC0.83□□□□□ -2.28
TRIM47Q96LD4 SNORD44.1-201ENST00000363202 61 ntBASIC0.82□□□□□ -2.28
TRIM47Q96LD4 RNU6-901P-201ENST00000384593 106 ntBASIC0.82□□□□□ -2.28
TRIM47Q96LD4 AC114755.3-201ENST00000481111 251 ntBASIC0.82□□□□□ -2.28
TRIM47Q96LD4 MIR5683-201ENST00000636514 76 ntBASIC0.82□□□□□ -2.28
TRIM47Q96LD4 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
TRIM47Q96LD4 SNORD56B-201ENST00000384713 71 ntBASIC0.81□□□□□ -2.28
TRIM47Q96LD4 SNORD60-201ENST00000383903 83 ntBASIC0.8□□□□□ -2.28
TRIM47Q96LD4 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.8□□□□□ -2.28
TRIM47Q96LD4 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
TRIM47Q96LD4 SNORD115.2-201ENST00000391126 59 ntBASIC0.79□□□□□ -2.28
TRIM47Q96LD4 Y_RNA.382-201ENST00000365672 114 ntBASIC0.78□□□□□ -2.28
TRIM47Q96LD4 MIR643-201ENST00000385267 97 ntBASIC0.78□□□□□ -2.28
TRIM47Q96LD4 MIR1197-201ENST00000408818 88 ntBASIC0.78□□□□□ -2.28
TRIM47Q96LD4 CR383656.4-201ENST00000546909 122 ntBASIC0.78□□□□□ -2.28
TRIM47Q96LD4 Y_RNA.134-201ENST00000363435 105 ntBASIC0.77□□□□□ -2.29
TRIM47Q96LD4 AL353691.2-201ENST00000443795 59 ntBASIC0.77□□□□□ -2.29
TRIM47Q96LD4 RNA5SP62-201ENST00000363457 110 ntBASIC0.76□□□□□ -2.29
TRIM47Q96LD4 RNA5SP499-201ENST00000363982 119 ntBASIC0.76□□□□□ -2.29
TRIM47Q96LD4 MIR548N-201ENST00000408742 75 ntBASIC0.76□□□□□ -2.29
TRIM47Q96LD4 MIR103A1-201ENST00000362165 78 ntBASIC0.75□□□□□ -2.29
TRIM47Q96LD4 SNORA26.4-201ENST00000391188 123 ntBASIC0.75□□□□□ -2.29
TRIM47Q96LD4 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.75□□□□□ -2.29
TRIM47Q96LD4 RNA5SP163-201ENST00000410304 99 ntBASIC0.75□□□□□ -2.29
TRIM47Q96LD4 MIR148A-201ENST00000362215 68 ntBASIC0.74□□□□□ -2.29
TRIM47Q96LD4 MIR5087-201ENST00000635826 76 ntBASIC0.73□□□□□ -2.29
TRIM47Q96LD4 AL445193.1-201ENST00000441183 141 ntBASIC0.72□□□□□ -2.29
TRIM47Q96LD4 RNA5SP67-201ENST00000516422 131 ntBASIC0.72□□□□□ -2.29
TRIM47Q96LD4 RNU6-1091P-201ENST00000363945 107 ntBASIC0.71□□□□□ -2.3
TRIM47Q96LD4 RNU6-815P-201ENST00000384080 113 ntBASIC0.71□□□□□ -2.3
TRIM47Q96LD4 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.71□□□□□ -2.3
TRIM47Q96LD4 SNORD18.2-201ENST00000459604 70 ntBASIC0.71□□□□□ -2.3
TRIM47Q96LD4 SNORA68.3-201ENST00000515906 83 ntBASIC0.71□□□□□ -2.3
TRIM47Q96LD4 RNU6-180P-201ENST00000516697 61 ntBASIC0.71□□□□□ -2.3
TRIM47Q96LD4 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.7□□□□□ -2.3
TRIM47Q96LD4 MIR2909-201ENST00000617113 69 ntBASIC0.7□□□□□ -2.3
TRIM47Q96LD4 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
TRIM47Q96LD4 SNORD115-33-201ENST00000363723 82 ntBASIC0.69□□□□□ -2.3
TRIM47Q96LD4 Y_RNA.320-201ENST00000365144 102 ntBASIC0.69□□□□□ -2.3
TRIM47Q96LD4 MIR548H2-201ENST00000408874 88 ntBASIC0.69□□□□□ -2.3
TRIM47Q96LD4 AC244250.2-201ENST00000418731 148 ntBASIC0.69□□□□□ -2.3
TRIM47Q96LD4 RPL35AP4-201ENST00000412007 102 ntBASIC0.68□□□□□ -2.3
TRIM47Q96LD4 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC0.68□□□□□ -2.3
TRIM47Q96LD4 Y_RNA.519-201ENST00000384553 102 ntBASIC0.67□□□□□ -2.3
TRIM47Q96LD4 MIR4280-201ENST00000582178 76 ntBASIC0.67□□□□□ -2.3
TRIM47Q96LD4 AC013734.1-201ENST00000619329 111 ntBASIC0.67□□□□□ -2.3
TRIM47Q96LD4 MIR892B-201ENST00000401279 77 ntBASIC0.66□□□□□ -2.3
TRIM47Q96LD4 MIR581-201ENST00000384895 96 ntBASIC0.65□□□□□ -2.31
TRIM47Q96LD4 MIR92A1-201ENST00000385233 78 ntBASIC0.65□□□□□ -2.31
TRIM47Q96LD4 Y_RNA.129-201ENST00000363392 110 ntBASIC0.64□□□□□ -2.31
TRIM47Q96LD4 Y_RNA.223-201ENST00000364290 113 ntBASIC0.64□□□□□ -2.31
TRIM47Q96LD4 SNORD38.3-201ENST00000516599 73 ntBASIC0.64□□□□□ -2.31
TRIM47Q96LD4 RNA5SP476-201ENST00000516613 103 ntBASIC0.64□□□□□ -2.31
TRIM47Q96LD4 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC0.64□□□□□ -2.31
TRIM47Q96LD4 MIRLET7D-201ENST00000362263 87 ntBASIC0.63□□□□□ -2.31
TRIM47Q96LD4 RNU6-68P-201ENST00000516576 104 ntBASIC0.62□□□□□ -2.31
TRIM47Q96LD4 AC069113.3-201ENST00000521019 150 ntBASIC0.62□□□□□ -2.31
TRIM47Q96LD4 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.62□□□□□ -2.31
TRIM47Q96LD4 RNU6-836P-201ENST00000362920 107 ntBASIC0.61□□□□□ -2.31
TRIM47Q96LD4 VTRNA1-3-201ENST00000365645 89 ntBASIC0.61□□□□□ -2.31
TRIM47Q96LD4 Y_RNA.603-201ENST00000410571 108 ntBASIC0.61□□□□□ -2.31
TRIM47Q96LD4 SNORA62.5-201ENST00000516634 120 ntBASIC0.61□□□□□ -2.31
TRIM47Q96LD4 MIR6851-201ENST00000617060 67 ntBASIC0.61□□□□□ -2.31
TRIM47Q96LD4 U6.97-201ENST00000636904 101 ntBASIC0.61□□□□□ -2.31
TRIM47Q96LD4 MIR507-201ENST00000385234 94 ntBASIC0.6□□□□□ -2.31
TRIM47Q96LD4 AC114737.2-201ENST00000421583 173 ntBASIC0.6□□□□□ -2.31
TRIM47Q96LD4 MIR655-201ENST00000362159 97 ntBASIC0.59□□□□□ -2.31
TRIM47Q96LD4 SNORD74.6-201ENST00000364796 70 ntBASIC0.59□□□□□ -2.31
TRIM47Q96LD4 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.59□□□□□ -2.32
TRIM47Q96LD4 MIR593-201ENST00000384856 100 ntBASIC0.58□□□□□ -2.32
TRIM47Q96LD4 MIR548T-201ENST00000408369 74 ntBASIC0.57□□□□□ -2.32
TRIM47Q96LD4 SNORD114-17-201ENST00000364699 75 ntBASIC0.56□□□□□ -2.32
TRIM47Q96LD4 HAR1A.1-201ENST00000459583 118 ntBASIC0.56□□□□□ -2.32
TRIM47Q96LD4 SNORD22.1-201ENST00000516331 125 ntBASIC0.56□□□□□ -2.32
TRIM47Q96LD4 MIR4514-201ENST00000581410 57 ntBASIC0.56□□□□□ -2.32
TRIM47Q96LD4 Y_RNA.260-201ENST00000364628 101 ntBASIC0.55□□□□□ -2.32
TRIM47Q96LD4 MIR23C-201ENST00000579846 100 ntBASIC0.55□□□□□ -2.32
TRIM47Q96LD4 RNU6-563P-201ENST00000364872 108 ntBASIC0.54□□□□□ -2.32
TRIM47Q96LD4 MIR518B-201ENST00000385127 83 ntBASIC0.54□□□□□ -2.32
TRIM47Q96LD4 RNA5SP63-201ENST00000391225 112 ntBASIC0.54□□□□□ -2.32
TRIM47Q96LD4 RNU7-165P-201ENST00000458864 60 ntBASIC0.54□□□□□ -2.32
TRIM47Q96LD4 RNA5SP224-201ENST00000365069 126 ntBASIC0.53□□□□□ -2.32
TRIM47Q96LD4 MIR610-201ENST00000385139 96 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 198.6 ms