Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.64□□□□□ -2.67
ZIC4Q8N9L1 RNU6-766P-201ENST00000362478 107 ntBASIC-1.65□□□□□ -2.67
ZIC4Q8N9L1 RNU6-219P-201ENST00000364728 107 ntBASIC-1.65□□□□□ -2.67
ZIC4Q8N9L1 MIR3170-201ENST00000582699 77 ntBASIC-1.65□□□□□ -2.67
ZIC4Q8N9L1 SNORD45.1-201ENST00000363181 77 ntBASIC-1.66□□□□□ -2.68
ZIC4Q8N9L1 RNU6-695P-201ENST00000391157 104 ntBASIC-1.66□□□□□ -2.68
ZIC4Q8N9L1 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.67□□□□□ -2.68
ZIC4Q8N9L1 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.67□□□□□ -2.68
ZIC4Q8N9L1 RNU6-686P-201ENST00000364839 107 ntBASIC-1.67□□□□□ -2.68
ZIC4Q8N9L1 RNU6-563P-201ENST00000364872 108 ntBASIC-1.67□□□□□ -2.68
ZIC4Q8N9L1 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.67□□□□□ -2.68
ZIC4Q8N9L1 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.67□□□□□ -2.68
ZIC4Q8N9L1 RNU6-258P-201ENST00000390884 101 ntBASIC-1.68□□□□□ -2.68
ZIC4Q8N9L1 RNU4-88P-201ENST00000411220 86 ntBASIC-1.68□□□□□ -2.68
ZIC4Q8N9L1 AC120024.2-201ENST00000576526 175 ntBASIC-1.68□□□□□ -2.68
ZIC4Q8N9L1 SNORD116-16-201ENST00000384533 92 ntBASIC-1.69□□□□□ -2.68
ZIC4Q8N9L1 MIR630-201ENST00000384957 97 ntBASIC-1.69□□□□□ -2.68
ZIC4Q8N9L1 SNORD113-2-201ENST00000391082 72 ntBASIC-1.69□□□□□ -2.68
ZIC4Q8N9L1 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.69□□□□□ -2.68
ZIC4Q8N9L1 RNU6-589P-201ENST00000516485 107 ntBASIC-1.69□□□□□ -2.68
ZIC4Q8N9L1 RNU6-267P-201ENST00000516714 103 ntBASIC-1.69□□□□□ -2.68
ZIC4Q8N9L1 AC099654.10-201ENST00000640395 161 ntBASIC-1.69□□□□□ -2.68
ZIC4Q8N9L1 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.7□□□□□ -2.68
ZIC4Q8N9L1 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.7□□□□□ -2.68
ZIC4Q8N9L1 MIR548AM-201ENST00000584298 74 ntBASIC-1.7□□□□□ -2.68
ZIC4Q8N9L1 MIR548BB-201ENST00000626714 66 ntBASIC-1.7□□□□□ -2.68
ZIC4Q8N9L1 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.71□□□□□ -2.68
ZIC4Q8N9L1 MIR548AA1-201ENST00000384971 97 ntBASIC-1.71□□□□□ -2.68
ZIC4Q8N9L1 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.71□□□□□ -2.68
ZIC4Q8N9L1 RNA5SP215-201ENST00000363440 122 ntBASIC-1.72□□□□□ -2.68
ZIC4Q8N9L1 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.72□□□□□ -2.68
ZIC4Q8N9L1 SNORD116-22-201ENST00000384430 92 ntBASIC-1.72□□□□□ -2.68
ZIC4Q8N9L1 SNORA41B-201ENST00000384785 128 ntBASIC-1.72□□□□□ -2.68
ZIC4Q8N9L1 RNU6-402P-201ENST00000410678 103 ntBASIC-1.72□□□□□ -2.68
ZIC4Q8N9L1 MIR3123-201ENST00000583417 75 ntBASIC-1.72□□□□□ -2.68
ZIC4Q8N9L1 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.72□□□□□ -2.68
ZIC4Q8N9L1 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.72□□□□□ -2.68
ZIC4Q8N9L1 SNORD1B-201ENST00000363091 84 ntBASIC-1.73□□□□□ -2.69
ZIC4Q8N9L1 RNU6-841P-201ENST00000383872 107 ntBASIC-1.73□□□□□ -2.69
ZIC4Q8N9L1 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.73□□□□□ -2.69
ZIC4Q8N9L1 MIR2052-201ENST00000636055 55 ntBASIC-1.73□□□□□ -2.69
ZIC4Q8N9L1 RNU6-959P-201ENST00000384671 107 ntBASIC-1.74□□□□□ -2.69
ZIC4Q8N9L1 RNU6-129P-201ENST00000391022 107 ntBASIC-1.74□□□□□ -2.69
ZIC4Q8N9L1 MTND4LP1-201ENST00000446263 157 ntBASIC-1.74□□□□□ -2.69
ZIC4Q8N9L1 RNY4-201ENST00000516507 96 ntBASIC-1.74□□□□□ -2.69
ZIC4Q8N9L1 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.74□□□□□ -2.69
ZIC4Q8N9L1 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.74□□□□□ -2.69
ZIC4Q8N9L1 SNORD113.1-201ENST00000363280 73 ntBASIC-1.75□□□□□ -2.69
ZIC4Q8N9L1 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.75□□□□□ -2.69
ZIC4Q8N9L1 MIR4484-201ENST00000582855 83 ntBASIC-1.75□□□□□ -2.69
ZIC4Q8N9L1 MALAT1.1-201ENST00000618249 95 ntBASIC-1.75□□□□□ -2.69
ZIC4Q8N9L1 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.75□□□□□ -2.69
ZIC4Q8N9L1 AC008267.6-201ENST00000441664 139 ntBASIC-1.76□□□□□ -2.69
ZIC4Q8N9L1 MIR1297-201ENST00000637311 77 ntBASIC-1.76□□□□□ -2.69
ZIC4Q8N9L1 RNU6-668P-201ENST00000364180 107 ntBASIC-1.77□□□□□ -2.69
ZIC4Q8N9L1 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.77□□□□□ -2.69
ZIC4Q8N9L1 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.77□□□□□ -2.69
ZIC4Q8N9L1 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.77□□□□□ -2.69
ZIC4Q8N9L1 Y_RNA.703-201ENST00000516846 111 ntBASIC-1.77□□□□□ -2.69
ZIC4Q8N9L1 MIR3133-201ENST00000583157 78 ntBASIC-1.77□□□□□ -2.69
ZIC4Q8N9L1 MIR8053-201ENST00000613344 75 ntBASIC-1.77□□□□□ -2.69
ZIC4Q8N9L1 AL365222.1-201ENST00000614661 98 ntBASIC-1.77□□□□□ -2.69
ZIC4Q8N9L1 RNU6-247P-201ENST00000362636 107 ntBASIC-1.78□□□□□ -2.69
ZIC4Q8N9L1 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.78□□□□□ -2.69
ZIC4Q8N9L1 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.78□□□□□ -2.69
ZIC4Q8N9L1 MIR4748-201ENST00000578076 82 ntBASIC-1.78□□□□□ -2.69
ZIC4Q8N9L1 MIR4719-201ENST00000585233 84 ntBASIC-1.78□□□□□ -2.69
ZIC4Q8N9L1 AP001318.4-201ENST00000616637 121 ntBASIC-1.78□□□□□ -2.69
ZIC4Q8N9L1 MIR450A1-201ENST00000362262 91 ntBASIC-1.79□□□□□ -2.7
ZIC4Q8N9L1 RNU6-675P-201ENST00000384236 104 ntBASIC-1.79□□□□□ -2.7
ZIC4Q8N9L1 SNORD45A-201ENST00000384512 84 ntBASIC-1.79□□□□□ -2.7
ZIC4Q8N9L1 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.79□□□□□ -2.7
ZIC4Q8N9L1 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.79□□□□□ -2.7
ZIC4Q8N9L1 MIR466-201ENST00000580653 84 ntBASIC-1.79□□□□□ -2.7
ZIC4Q8N9L1 AC005520.4-201ENST00000604337 90 ntBASIC-1.79□□□□□ -2.7
ZIC4Q8N9L1 RNU6-834P-201ENST00000362367 110 ntBASIC-1.8□□□□□ -2.7
ZIC4Q8N9L1 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.8□□□□□ -2.7
ZIC4Q8N9L1 RNU7-151P-201ENST00000516930 53 ntBASIC-1.8□□□□□ -2.7
ZIC4Q8N9L1 AC013734.1-201ENST00000619329 111 ntBASIC-1.8□□□□□ -2.7
ZIC4Q8N9L1 MIR664A-201ENST00000626086 82 ntBASIC-1.8□□□□□ -2.7
ZIC4Q8N9L1 SNORA27.2-201ENST00000363365 126 ntBASIC-1.81□□□□□ -2.7
ZIC4Q8N9L1 AL031737.1-201ENST00000450125 223 ntBASIC-1.81□□□□□ -2.7
ZIC4Q8N9L1 MIR7978-201ENST00000636158 59 ntBASIC-1.81□□□□□ -2.7
ZIC4Q8N9L1 AC006160.2-201ENST00000637708 154 ntBASIC-1.81□□□□□ -2.7
ZIC4Q8N9L1 RNA5SP173-201ENST00000364857 136 ntBASIC-1.82□□□□□ -2.7
ZIC4Q8N9L1 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.82□□□□□ -2.7
ZIC4Q8N9L1 RNU6-669P-201ENST00000365575 107 ntBASIC-1.82□□□□□ -2.7
ZIC4Q8N9L1 RNU6-81P-201ENST00000365608 104 ntBASIC-1.82□□□□□ -2.7
ZIC4Q8N9L1 MIR488-201ENST00000365739 83 ntBASIC-1.82□□□□□ -2.7
ZIC4Q8N9L1 RNU6-1056P-201ENST00000383996 107 ntBASIC-1.82□□□□□ -2.7
ZIC4Q8N9L1 MIR125B1-201ENST00000385236 88 ntBASIC-1.82□□□□□ -2.7
ZIC4Q8N9L1 RNY4P18-201ENST00000391107 89 ntBASIC-1.82□□□□□ -2.7
ZIC4Q8N9L1 SNORA63.4-201ENST00000362763 126 ntBASIC-1.83□□□□□ -2.7
ZIC4Q8N9L1 SNORD63.2-201ENST00000516303 64 ntBASIC-1.83□□□□□ -2.7
ZIC4Q8N9L1 SNORA40.13-201ENST00000516379 120 ntBASIC-1.83□□□□□ -2.7
ZIC4Q8N9L1 RNU6-794P-201ENST00000517261 64 ntBASIC-1.83□□□□□ -2.7
ZIC4Q8N9L1 AC090425.1-201ENST00000610007 140 ntBASIC-1.83□□□□□ -2.7
ZIC4Q8N9L1 Y_RNA.186-201ENST00000363899 92 ntBASIC-1.84□□□□□ -2.7
ZIC4Q8N9L1 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.84□□□□□ -2.7
ZIC4Q8N9L1 RNU6-230P-201ENST00000362457 104 ntBASIC-1.85□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 217.5 ms