Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.69□□□□□ -2.68
ATL3Q6DD88 RNU6-164P-201ENST00000364604 103 ntBASIC-1.69□□□□□ -2.68
ATL3Q6DD88 AC006160.2-201ENST00000637708 154 ntBASIC-1.69□□□□□ -2.68
ATL3Q6DD88 RNU6-698P-201ENST00000363523 107 ntBASIC-1.7□□□□□ -2.68
ATL3Q6DD88 RNU6-34P-201ENST00000364874 107 ntBASIC-1.7□□□□□ -2.68
ATL3Q6DD88 U4.4-201ENST00000620626 117 ntBASIC-1.7□□□□□ -2.68
ATL3Q6DD88 AC091912.2-201ENST00000624798 167 ntBASIC-1.7□□□□□ -2.68
ATL3Q6DD88 MIR1297-201ENST00000637311 77 ntBASIC-1.7□□□□□ -2.68
ATL3Q6DD88 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.71□□□□□ -2.68
ATL3Q6DD88 RNU6-696P-201ENST00000390834 107 ntBASIC-1.72□□□□□ -2.68
ATL3Q6DD88 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.72□□□□□ -2.68
ATL3Q6DD88 RNU6-118P-201ENST00000516552 102 ntBASIC-1.72□□□□□ -2.68
ATL3Q6DD88 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.73□□□□□ -2.69
ATL3Q6DD88 RNU6-32P-201ENST00000383948 107 ntBASIC-1.73□□□□□ -2.69
ATL3Q6DD88 RNU6-147P-201ENST00000383983 107 ntBASIC-1.73□□□□□ -2.69
ATL3Q6DD88 RNU6-13P-201ENST00000384248 107 ntBASIC-1.73□□□□□ -2.69
ATL3Q6DD88 RNU6-12P-201ENST00000384604 107 ntBASIC-1.73□□□□□ -2.69
ATL3Q6DD88 RNU6-41P-201ENST00000384741 107 ntBASIC-1.73□□□□□ -2.69
ATL3Q6DD88 AC090616.4-201ENST00000448026 115 ntBASIC-1.73□□□□□ -2.69
ATL3Q6DD88 RNY4-201ENST00000516507 96 ntBASIC-1.73□□□□□ -2.69
ATL3Q6DD88 RNU6-844P-201ENST00000517175 102 ntBASIC-1.73□□□□□ -2.69
ATL3Q6DD88 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.74□□□□□ -2.69
ATL3Q6DD88 MIR548V-201ENST00000584165 80 ntBASIC-1.74□□□□□ -2.69
ATL3Q6DD88 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.75□□□□□ -2.69
ATL3Q6DD88 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.76□□□□□ -2.69
ATL3Q6DD88 MIR548Q-201ENST00000408404 100 ntBASIC-1.76□□□□□ -2.69
ATL3Q6DD88 RPL35AP4-201ENST00000412007 102 ntBASIC-1.76□□□□□ -2.69
ATL3Q6DD88 SNORD54-201ENST00000459159 67 ntBASIC-1.76□□□□□ -2.69
ATL3Q6DD88 MIR4484-201ENST00000582855 83 ntBASIC-1.76□□□□□ -2.69
ATL3Q6DD88 RNU6-598P-201ENST00000364017 105 ntBASIC-1.77□□□□□ -2.69
ATL3Q6DD88 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.77□□□□□ -2.69
ATL3Q6DD88 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.77□□□□□ -2.69
ATL3Q6DD88 MIR6874-201ENST00000635894 71 ntBASIC-1.77□□□□□ -2.69
ATL3Q6DD88 SNORA63.4-201ENST00000362763 126 ntBASIC-1.78□□□□□ -2.69
ATL3Q6DD88 RNA5SP215-201ENST00000363440 122 ntBASIC-1.78□□□□□ -2.69
ATL3Q6DD88 RNU6-215P-201ENST00000365169 102 ntBASIC-1.78□□□□□ -2.69
ATL3Q6DD88 SNORD113.1-201ENST00000363280 73 ntBASIC-1.79□□□□□ -2.7
ATL3Q6DD88 RNA5SP86-201ENST00000390869 98 ntBASIC-1.79□□□□□ -2.7
ATL3Q6DD88 AL606753.1-201ENST00000427435 87 ntBASIC-1.79□□□□□ -2.7
ATL3Q6DD88 MTND4LP1-201ENST00000446263 157 ntBASIC-1.79□□□□□ -2.7
ATL3Q6DD88 MIR8053-201ENST00000613344 75 ntBASIC-1.79□□□□□ -2.7
ATL3Q6DD88 MIR429-201ENST00000362106 83 ntBASIC-1.8□□□□□ -2.7
ATL3Q6DD88 RNU6-315P-201ENST00000362666 107 ntBASIC-1.8□□□□□ -2.7
ATL3Q6DD88 RNU6-380P-201ENST00000410207 107 ntBASIC-1.8□□□□□ -2.7
ATL3Q6DD88 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.8□□□□□ -2.7
ATL3Q6DD88 SNORD20-201ENST00000384550 80 ntBASIC-1.81□□□□□ -2.7
ATL3Q6DD88 MIR630-201ENST00000384957 97 ntBASIC-1.81□□□□□ -2.7
ATL3Q6DD88 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.82□□□□□ -2.7
ATL3Q6DD88 SNORD113-2-201ENST00000391082 72 ntBASIC-1.82□□□□□ -2.7
ATL3Q6DD88 RNU6-630P-201ENST00000391258 106 ntBASIC-1.82□□□□□ -2.7
ATL3Q6DD88 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.82□□□□□ -2.7
ATL3Q6DD88 RNU6-168P-201ENST00000516189 101 ntBASIC-1.82□□□□□ -2.7
ATL3Q6DD88 RNU6-919P-201ENST00000516731 104 ntBASIC-1.82□□□□□ -2.7
ATL3Q6DD88 SNORD18.1-201ENST00000363807 70 ntBASIC-1.83□□□□□ -2.7
ATL3Q6DD88 RNU6-668P-201ENST00000364180 107 ntBASIC-1.83□□□□□ -2.7
ATL3Q6DD88 RNU6-608P-201ENST00000383927 104 ntBASIC-1.83□□□□□ -2.7
ATL3Q6DD88 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.84□□□□□ -2.7
ATL3Q6DD88 RNU6-980P-201ENST00000516925 103 ntBASIC-1.84□□□□□ -2.7
ATL3Q6DD88 MIR664A-201ENST00000626086 82 ntBASIC-1.84□□□□□ -2.7
ATL3Q6DD88 RNU6-979P-201ENST00000383896 107 ntBASIC-1.85□□□□□ -2.71
ATL3Q6DD88 MIR520D-201ENST00000385002 87 ntBASIC-1.85□□□□□ -2.71
ATL3Q6DD88 SNORD45A-201ENST00000384512 84 ntBASIC-1.86□□□□□ -2.71
ATL3Q6DD88 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.86□□□□□ -2.71
ATL3Q6DD88 MIR548H1-201ENST00000408610 102 ntBASIC-1.86□□□□□ -2.71
ATL3Q6DD88 MIR5588-201ENST00000581890 63 ntBASIC-1.86□□□□□ -2.71
ATL3Q6DD88 U2.18-201ENST00000622185 84 ntBASIC-1.86□□□□□ -2.71
ATL3Q6DD88 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.87□□□□□ -2.71
ATL3Q6DD88 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.87□□□□□ -2.71
ATL3Q6DD88 RNU6-49P-201ENST00000384256 107 ntBASIC-1.87□□□□□ -2.71
ATL3Q6DD88 SNORD116-16-201ENST00000384533 92 ntBASIC-1.87□□□□□ -2.71
ATL3Q6DD88 IGLL4P-201ENST00000614590 133 ntBASIC-1.87□□□□□ -2.71
ATL3Q6DD88 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.88□□□□□ -2.71
ATL3Q6DD88 RNU6-79P-201ENST00000362511 107 ntBASIC-1.88□□□□□ -2.71
ATL3Q6DD88 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.88□□□□□ -2.71
ATL3Q6DD88 RNY1P1-201ENST00000364372 112 ntBASIC-1.89□□□□□ -2.71
ATL3Q6DD88 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.89□□□□□ -2.71
ATL3Q6DD88 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.89□□□□□ -2.71
ATL3Q6DD88 RNU6-1131P-201ENST00000364955 107 ntBASIC-1.9□□□□□ -2.71
ATL3Q6DD88 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.9□□□□□ -2.71
ATL3Q6DD88 SNORA41B-201ENST00000384785 128 ntBASIC-1.9□□□□□ -2.71
ATL3Q6DD88 AC018880.2-201ENST00000414265 201 ntBASIC-1.9□□□□□ -2.71
ATL3Q6DD88 RNU7-171P-201ENST00000459581 62 ntBASIC-1.91□□□□□ -2.72
ATL3Q6DD88 MIR548AA1-201ENST00000384971 97 ntBASIC-1.92□□□□□ -2.72
ATL3Q6DD88 MIR487B-201ENST00000385021 84 ntBASIC-1.92□□□□□ -2.72
ATL3Q6DD88 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.93□□□□□ -2.72
ATL3Q6DD88 MIR3170-201ENST00000582699 77 ntBASIC-1.93□□□□□ -2.72
ATL3Q6DD88 RNU6-44P-201ENST00000384045 107 ntBASIC-1.94□□□□□ -2.72
ATL3Q6DD88 RNA5SP89-201ENST00000410300 108 ntBASIC-1.94□□□□□ -2.72
ATL3Q6DD88 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.94□□□□□ -2.72
ATL3Q6DD88 MIR23C-201ENST00000579846 100 ntBASIC-1.94□□□□□ -2.72
ATL3Q6DD88 RNU6-228P-201ENST00000362700 106 ntBASIC-1.95□□□□□ -2.72
ATL3Q6DD88 RNA5SP173-201ENST00000364857 136 ntBASIC-1.95□□□□□ -2.72
ATL3Q6DD88 SNORD116-24-201ENST00000384549 92 ntBASIC-1.95□□□□□ -2.72
ATL3Q6DD88 MIR1245B-201ENST00000636115 69 ntBASIC-1.95□□□□□ -2.72
ATL3Q6DD88 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.96□□□□□ -2.72
ATL3Q6DD88 AL603908.1-201ENST00000406098 201 ntBASIC-1.96□□□□□ -2.72
ATL3Q6DD88 RNU6-400P-201ENST00000391173 106 ntBASIC-1.97□□□□□ -2.72
ATL3Q6DD88 MIR3139-201ENST00000579145 76 ntBASIC-1.97□□□□□ -2.72
ATL3Q6DD88 MIR4712-201ENST00000583750 82 ntBASIC-1.97□□□□□ -2.72
ATL3Q6DD88 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.98□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 210.4 ms