Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 MIR5704-201ENST00000584029 77 ntBASIC0.34□□□□□ -2.36
SOX4Q06945 AC104408.1-201ENST00000605241 170 ntBASIC0.34□□□□□ -2.36
SOX4Q06945 RNU4-33P-201ENST00000364316 85 ntBASIC0.33□□□□□ -2.36
SOX4Q06945 RNA5SP134-201ENST00000516492 96 ntBASIC0.33□□□□□ -2.36
SOX4Q06945 MIR4514-201ENST00000581410 57 ntBASIC0.33□□□□□ -2.36
SOX4Q06945 MIR4802-201ENST00000581881 80 ntBASIC0.33□□□□□ -2.36
SOX4Q06945 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC0.33□□□□□ -2.36
SOX4Q06945 MIR4743-201ENST00000584576 69 ntBASIC0.33□□□□□ -2.36
SOX4Q06945 MIR145-201ENST00000384967 88 ntBASIC0.32□□□□□ -2.36
SOX4Q06945 MIR548AA1-201ENST00000384971 97 ntBASIC0.32□□□□□ -2.36
SOX4Q06945 RNA5SP214-201ENST00000363378 118 ntBASIC0.31□□□□□ -2.36
SOX4Q06945 RNU4-88P-201ENST00000411220 86 ntBASIC0.31□□□□□ -2.36
SOX4Q06945 SNX3P1X-201ENST00000414887 175 ntBASIC0.31□□□□□ -2.36
SOX4Q06945 RNU7-165P-201ENST00000458864 60 ntBASIC0.31□□□□□ -2.36
SOX4Q06945 RNU7-160P-201ENST00000516660 62 ntBASIC0.31□□□□□ -2.36
SOX4Q06945 AC023932.2-201ENST00000603176 175 ntBASIC0.31□□□□□ -2.36
SOX4Q06945 MIR8068-201ENST00000618032 68 ntBASIC0.31□□□□□ -2.36
SOX4Q06945 RNU6-901P-201ENST00000384593 106 ntBASIC0.3□□□□□ -2.36
SOX4Q06945 RNU6-1174P-201ENST00000517278 101 ntBASIC0.3□□□□□ -2.36
SOX4Q06945 RNU6-995P-201ENST00000391244 107 ntBASIC0.29□□□□□ -2.36
SOX4Q06945 AC244250.2-201ENST00000418731 148 ntBASIC0.29□□□□□ -2.36
SOX4Q06945 RNU7-159P-201ENST00000459284 62 ntBASIC0.29□□□□□ -2.36
SOX4Q06945 MIR6854-201ENST00000614935 69 ntBASIC0.29□□□□□ -2.36
SOX4Q06945 RNU6-924P-201ENST00000362926 108 ntBASIC0.28□□□□□ -2.36
SOX4Q06945 SNORA42.1-201ENST00000363515 137 ntBASIC0.28□□□□□ -2.36
SOX4Q06945 Y_RNA.69-201ENST00000362885 109 ntBASIC0.27□□□□□ -2.37
SOX4Q06945 SNORD56B-201ENST00000384713 71 ntBASIC0.27□□□□□ -2.37
SOX4Q06945 Y_RNA.613-201ENST00000410726 97 ntBASIC0.27□□□□□ -2.37
SOX4Q06945 RNU6-419P-201ENST00000517030 63 ntBASIC0.27□□□□□ -2.37
SOX4Q06945 MIR604-201ENST00000384880 94 ntBASIC0.26□□□□□ -2.37
SOX4Q06945 RNU6-1267P-201ENST00000410747 107 ntBASIC0.26□□□□□ -2.37
SOX4Q06945 RNU6-1206P-201ENST00000516339 103 ntBASIC0.26□□□□□ -2.37
SOX4Q06945 U4.2-201ENST00000618561 85 ntBASIC0.26□□□□□ -2.37
SOX4Q06945 SNORD114-9-201ENST00000364370 72 ntBASIC0.25□□□□□ -2.37
SOX4Q06945 RNU6-46P-201ENST00000383860 107 ntBASIC0.25□□□□□ -2.37
SOX4Q06945 SNORD63.1-201ENST00000516178 80 ntBASIC0.25□□□□□ -2.37
SOX4Q06945 RNY1P9-201ENST00000532431 109 ntBASIC0.25□□□□□ -2.37
SOX4Q06945 MIR655-201ENST00000362159 97 ntBASIC0.24□□□□□ -2.37
SOX4Q06945 SNORD114-5-201ENST00000362928 70 ntBASIC0.24□□□□□ -2.37
SOX4Q06945 SNORD114-31-201ENST00000363219 75 ntBASIC0.24□□□□□ -2.37
SOX4Q06945 MIR124-2-201ENST00000385081 109 ntBASIC0.24□□□□□ -2.37
SOX4Q06945 Y_RNA.610-201ENST00000410681 103 ntBASIC0.24□□□□□ -2.37
SOX4Q06945 MIR6718-201ENST00000616153 80 ntBASIC0.24□□□□□ -2.37
SOX4Q06945 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
SOX4Q06945 MIR125B1-201ENST00000385236 88 ntBASIC0.22□□□□□ -2.37
SOX4Q06945 AC114755.3-201ENST00000481111 251 ntBASIC0.22□□□□□ -2.37
SOX4Q06945 AL445193.1-201ENST00000441183 141 ntBASIC0.21□□□□□ -2.38
SOX4Q06945 MIR4493-201ENST00000584016 73 ntBASIC0.21□□□□□ -2.38
SOX4Q06945 AP001180.6-201ENST00000584918 159 ntBASIC0.21□□□□□ -2.38
SOX4Q06945 RNU6-828P-201ENST00000364876 107 ntBASIC0.2□□□□□ -2.38
SOX4Q06945 MIR1207-201ENST00000408249 87 ntBASIC0.2□□□□□ -2.38
SOX4Q06945 MIR371B-201ENST00000638082 66 ntBASIC0.2□□□□□ -2.38
SOX4Q06945 RNU6-929P-201ENST00000384429 107 ntBASIC0.19□□□□□ -2.38
SOX4Q06945 MIR4280-201ENST00000582178 76 ntBASIC0.19□□□□□ -2.38
SOX4Q06945 RPS29P8-201ENST00000445109 171 ntBASIC0.18□□□□□ -2.38
SOX4Q06945 AC104692.1-201ENST00000472406 90 ntBASIC0.18□□□□□ -2.38
SOX4Q06945 RNU6-1238P-201ENST00000517215 102 ntBASIC0.18□□□□□ -2.38
SOX4Q06945 MIR5190-201ENST00000581537 80 ntBASIC0.18□□□□□ -2.38
SOX4Q06945 MIR4768-201ENST00000585270 74 ntBASIC0.18□□□□□ -2.38
SOX4Q06945 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.18□□□□□ -2.38
SOX4Q06945 SNORD95.1-201ENST00000364099 68 ntBASIC0.17□□□□□ -2.38
SOX4Q06945 SNORD49B-201ENST00000365172 72 ntBASIC0.17□□□□□ -2.38
SOX4Q06945 Y_RNA.468-201ENST00000384298 102 ntBASIC0.17□□□□□ -2.38
SOX4Q06945 RNU6-732P-201ENST00000516033 103 ntBASIC0.17□□□□□ -2.38
SOX4Q06945 RNU6-974P-201ENST00000384099 108 ntBASIC0.16□□□□□ -2.38
SOX4Q06945 Y_RNA.514-201ENST00000384528 112 ntBASIC0.16□□□□□ -2.38
SOX4Q06945 MIR601-201ENST00000385256 79 ntBASIC0.16□□□□□ -2.38
SOX4Q06945 RNU6-930P-201ENST00000390938 100 ntBASIC0.15□□□□□ -2.39
SOX4Q06945 Y_RNA.139-201ENST00000363464 102 ntBASIC0.14□□□□□ -2.39
SOX4Q06945 MIR224-201ENST00000384889 81 ntBASIC0.14□□□□□ -2.39
SOX4Q06945 MIR1295A-201ENST00000408463 79 ntBASIC0.14□□□□□ -2.39
SOX4Q06945 SNORD38.3-201ENST00000516599 73 ntBASIC0.14□□□□□ -2.39
SOX4Q06945 MIR3170-201ENST00000582699 77 ntBASIC0.14□□□□□ -2.39
SOX4Q06945 Y_RNA.413-201ENST00000384007 102 ntBASIC0.13□□□□□ -2.39
SOX4Q06945 Y_RNA.754-201ENST00000476024 102 ntBASIC0.13□□□□□ -2.39
SOX4Q06945 Y_RNA.790-201ENST00000614282 102 ntBASIC0.13□□□□□ -2.39
SOX4Q06945 Y_RNA.782-201ENST00000614695 102 ntBASIC0.13□□□□□ -2.39
SOX4Q06945 MIR101-1-201ENST00000362265 75 ntBASIC0.12□□□□□ -2.39
SOX4Q06945 AL451105.1-201ENST00000450005 189 ntBASIC0.12□□□□□ -2.39
SOX4Q06945 DLEU2_4.2-201ENST00000616613 58 ntBASIC0.12□□□□□ -2.39
SOX4Q06945 RNU6-1233P-201ENST00000362922 102 ntBASIC0.11□□□□□ -2.39
SOX4Q06945 SNORD19-201ENST00000391191 68 ntBASIC0.11□□□□□ -2.39
SOX4Q06945 MIR548Q-201ENST00000408404 100 ntBASIC0.11□□□□□ -2.39
SOX4Q06945 MIR6851-201ENST00000617060 67 ntBASIC0.11□□□□□ -2.39
SOX4Q06945 MTRNR2L9-201ENST00000622562 75 ntBASIC0.11□□□□□ -2.39
SOX4Q06945 RNU6-838P-201ENST00000363399 108 ntBASIC0.1□□□□□ -2.39
SOX4Q06945 RNU6-1111P-201ENST00000391118 107 ntBASIC0.1□□□□□ -2.39
SOX4Q06945 RNA5SP451-201ENST00000410588 110 ntBASIC0.1□□□□□ -2.39
SOX4Q06945 SNORD63.2-201ENST00000516303 64 ntBASIC0.1□□□□□ -2.39
SOX4Q06945 Y_RNA.684-201ENST00000516510 99 ntBASIC0.1□□□□□ -2.39
SOX4Q06945 MIR4645-201ENST00000583158 77 ntBASIC0.1□□□□□ -2.39
SOX4Q06945 RNU6-247P-201ENST00000362636 107 ntBASIC0.09□□□□□ -2.4
SOX4Q06945 MIR4290-201ENST00000583807 95 ntBASIC0.09□□□□□ -2.4
SOX4Q06945 MIR548F3-201ENST00000408509 87 ntBASIC0.08□□□□□ -2.4
SOX4Q06945 SNORD18.2-201ENST00000459604 70 ntBASIC0.08□□□□□ -2.4
SOX4Q06945 RNA5SP66-201ENST00000517178 101 ntBASIC0.08□□□□□ -2.4
SOX4Q06945 MIR8064-201ENST00000612863 90 ntBASIC0.08□□□□□ -2.4
SOX4Q06945 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.08□□□□□ -2.4
SOX4Q06945 SNORD74.6-201ENST00000364796 70 ntBASIC0.07□□□□□ -2.4
SOX4Q06945 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 8 ms