Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.23□□□□□ -2.37
YBX1P67809 MIR6854-201ENST00000614935 69 ntBASIC0.23□□□□□ -2.37
YBX1P67809 MIR8068-201ENST00000618032 68 ntBASIC0.23□□□□□ -2.37
YBX1P67809 RNU6-924P-201ENST00000362926 108 ntBASIC0.22□□□□□ -2.37
YBX1P67809 SNORD114-5-201ENST00000362928 70 ntBASIC0.22□□□□□ -2.37
YBX1P67809 SNORA42.1-201ENST00000363515 137 ntBASIC0.22□□□□□ -2.37
YBX1P67809 Y_RNA.185-201ENST00000363894 100 ntBASIC0.22□□□□□ -2.37
YBX1P67809 MIR4802-201ENST00000581881 80 ntBASIC0.22□□□□□ -2.37
YBX1P67809 RNU6-753P-201ENST00000363926 107 ntBASIC0.21□□□□□ -2.38
YBX1P67809 SNORD114-9-201ENST00000364370 72 ntBASIC0.21□□□□□ -2.38
YBX1P67809 RNU6-30P-201ENST00000384561 107 ntBASIC0.21□□□□□ -2.38
YBX1P67809 MIR124-2-201ENST00000385081 109 ntBASIC0.21□□□□□ -2.38
YBX1P67809 RNU6-1174P-201ENST00000517278 101 ntBASIC0.21□□□□□ -2.38
YBX1P67809 MIR548X-201ENST00000580069 75 ntBASIC0.21□□□□□ -2.38
YBX1P67809 RNU4-33P-201ENST00000364316 85 ntBASIC0.2□□□□□ -2.38
YBX1P67809 SNORD114-15-201ENST00000364687 72 ntBASIC0.2□□□□□ -2.38
YBX1P67809 SNORD56B-201ENST00000384713 71 ntBASIC0.2□□□□□ -2.38
YBX1P67809 AL445193.1-201ENST00000441183 141 ntBASIC0.2□□□□□ -2.38
YBX1P67809 RNU6-980P-201ENST00000516925 103 ntBASIC0.2□□□□□ -2.38
YBX1P67809 MIR4768-201ENST00000585270 74 ntBASIC0.2□□□□□ -2.38
YBX1P67809 Y_RNA.613-201ENST00000410726 97 ntBASIC0.19□□□□□ -2.38
YBX1P67809 RNU6-758P-201ENST00000516292 89 ntBASIC0.19□□□□□ -2.38
YBX1P67809 RNU7-160P-201ENST00000516660 62 ntBASIC0.19□□□□□ -2.38
YBX1P67809 MIR1295A-201ENST00000408463 79 ntBASIC0.18□□□□□ -2.38
YBX1P67809 SNORD63.1-201ENST00000516178 80 ntBASIC0.18□□□□□ -2.38
YBX1P67809 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.18□□□□□ -2.38
YBX1P67809 RNU6-1267P-201ENST00000410747 107 ntBASIC0.17□□□□□ -2.38
YBX1P67809 RNU4-88P-201ENST00000411220 86 ntBASIC0.17□□□□□ -2.38
YBX1P67809 SNORD57-201ENST00000448188 72 ntBASIC0.17□□□□□ -2.38
YBX1P67809 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC0.17□□□□□ -2.38
YBX1P67809 Y_RNA.69-201ENST00000362885 109 ntBASIC0.16□□□□□ -2.38
YBX1P67809 RNA5SP331-201ENST00000364986 107 ntBASIC0.16□□□□□ -2.38
YBX1P67809 RNU6-929P-201ENST00000384429 107 ntBASIC0.16□□□□□ -2.38
YBX1P67809 IGLVI-20-201ENST00000519296 130 ntBASIC0.16□□□□□ -2.38
YBX1P67809 MIR655-201ENST00000362159 97 ntBASIC0.15□□□□□ -2.39
YBX1P67809 AC114755.3-201ENST00000481111 251 ntBASIC0.15□□□□□ -2.39
YBX1P67809 RNU6-1206P-201ENST00000516339 103 ntBASIC0.15□□□□□ -2.39
YBX1P67809 MIR371B-201ENST00000638082 66 ntBASIC0.15□□□□□ -2.39
YBX1P67809 SNORD49B-201ENST00000365172 72 ntBASIC0.14□□□□□ -2.39
YBX1P67809 RNU6-46P-201ENST00000383860 107 ntBASIC0.14□□□□□ -2.39
YBX1P67809 RNU6-419P-201ENST00000517030 63 ntBASIC0.13□□□□□ -2.39
YBX1P67809 RNU6-1238P-201ENST00000517215 102 ntBASIC0.13□□□□□ -2.39
YBX1P67809 RNA5SP368-201ENST00000364298 116 ntBASIC0.12□□□□□ -2.39
YBX1P67809 RNU6-828P-201ENST00000364876 107 ntBASIC0.12□□□□□ -2.39
YBX1P67809 MIR4280-201ENST00000582178 76 ntBASIC0.12□□□□□ -2.39
YBX1P67809 RNU6-732P-201ENST00000516033 103 ntBASIC0.11□□□□□ -2.39
YBX1P67809 MIR125B1-201ENST00000385236 88 ntBASIC0.1□□□□□ -2.39
YBX1P67809 MIR548Q-201ENST00000408404 100 ntBASIC0.1□□□□□ -2.39
YBX1P67809 AC104692.1-201ENST00000472406 90 ntBASIC0.1□□□□□ -2.39
YBX1P67809 SNORD114-31-201ENST00000363219 75 ntBASIC0.09□□□□□ -2.4
YBX1P67809 RNA5SP67-201ENST00000516422 131 ntBASIC0.09□□□□□ -2.4
YBX1P67809 SNORD38.3-201ENST00000516599 73 ntBASIC0.09□□□□□ -2.4
YBX1P67809 MIR1295B-201ENST00000636144 60 ntBASIC0.09□□□□□ -2.4
YBX1P67809 RNU6-247P-201ENST00000362636 107 ntBASIC0.07□□□□□ -2.4
YBX1P67809 RNU6-1233P-201ENST00000362922 102 ntBASIC0.07□□□□□ -2.4
YBX1P67809 MIR604-201ENST00000384880 94 ntBASIC0.07□□□□□ -2.4
YBX1P67809 SNORD18.2-201ENST00000459604 70 ntBASIC0.07□□□□□ -2.4
YBX1P67809 MIR3170-201ENST00000582699 77 ntBASIC0.07□□□□□ -2.4
YBX1P67809 MIR4493-201ENST00000584016 73 ntBASIC0.07□□□□□ -2.4
YBX1P67809 Y_RNA.139-201ENST00000363464 102 ntBASIC0.06□□□□□ -2.4
YBX1P67809 SNORD114-12-201ENST00000365400 75 ntBASIC0.06□□□□□ -2.4
YBX1P67809 RNA5SP66-201ENST00000517178 101 ntBASIC0.06□□□□□ -2.4
YBX1P67809 AP001180.6-201ENST00000584918 159 ntBASIC0.06□□□□□ -2.4
YBX1P67809 MIR6851-201ENST00000617060 67 ntBASIC0.06□□□□□ -2.4
YBX1P67809 RNU6-1111P-201ENST00000391118 107 ntBASIC0.05□□□□□ -2.4
YBX1P67809 SNORD63.2-201ENST00000516303 64 ntBASIC0.05□□□□□ -2.4
YBX1P67809 MIR4667-201ENST00000578933 66 ntBASIC0.05□□□□□ -2.4
YBX1P67809 MIR4290-201ENST00000583807 95 ntBASIC0.05□□□□□ -2.4
YBX1P67809 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
YBX1P67809 RNU6-930P-201ENST00000390938 100 ntBASIC0.04□□□□□ -2.4
YBX1P67809 MIR409-201ENST00000362237 79 ntBASIC0.03□□□□□ -2.4
YBX1P67809 RNU6-974P-201ENST00000384099 108 ntBASIC0.03□□□□□ -2.4
YBX1P67809 SNORD19-201ENST00000391191 68 ntBASIC0.03□□□□□ -2.4
YBX1P67809 MIR4263-201ENST00000584745 83 ntBASIC0.03□□□□□ -2.4
YBX1P67809 Y_RNA.610-201ENST00000410681 103 ntBASIC0.02□□□□□ -2.41
YBX1P67809 AL451105.1-201ENST00000450005 189 ntBASIC0.02□□□□□ -2.41
YBX1P67809 AL590491.3-201ENST00000610731 82 ntBASIC0.02□□□□□ -2.41
YBX1P67809 AC093726.3-201ENST00000637588 150 ntBASIC0.02□□□□□ -2.41
YBX1P67809 SNORD74.6-201ENST00000364796 70 ntBASIC0.01□□□□□ -2.41
YBX1P67809 MIR518B-201ENST00000385127 83 ntBASIC0.01□□□□□ -2.41
YBX1P67809 SNORD114-16-201ENST00000363044 70 ntBASIC0□□□□□ -2.41
YBX1P67809 SNORD45.2-201ENST00000363552 72 ntBASIC0□□□□□ -2.41
YBX1P67809 SNORA18.1-201ENST00000363418 128 ntBASIC-0.01□□□□□ -2.41
YBX1P67809 SNORD22.1-201ENST00000516331 125 ntBASIC-0.01□□□□□ -2.41
YBX1P67809 MTRNR2L9-201ENST00000622562 75 ntBASIC-0.01□□□□□ -2.41
YBX1P67809 MIR204-201ENST00000385200 110 ntBASIC-0.02□□□□□ -2.41
YBX1P67809 MIR4645-201ENST00000583158 77 ntBASIC-0.02□□□□□ -2.41
YBX1P67809 DLEU2_4.2-201ENST00000616613 58 ntBASIC-0.02□□□□□ -2.41
YBX1P67809 RNU6-838P-201ENST00000363399 108 ntBASIC-0.03□□□□□ -2.41
YBX1P67809 SNORD95.1-201ENST00000364099 68 ntBASIC-0.03□□□□□ -2.41
YBX1P67809 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.03□□□□□ -2.41
YBX1P67809 Y_RNA.321-201ENST00000365149 102 ntBASIC-0.04□□□□□ -2.42
YBX1P67809 RNA5SP266-201ENST00000410273 108 ntBASIC-0.04□□□□□ -2.42
YBX1P67809 MIR3666-201ENST00000607845 111 ntBASIC-0.04□□□□□ -2.42
YBX1P67809 MIR101-1-201ENST00000362265 75 ntBASIC-0.05□□□□□ -2.42
YBX1P67809 MIR214-201ENST00000385214 110 ntBASIC-0.05□□□□□ -2.42
YBX1P67809 SNORA26.4-201ENST00000391188 123 ntBASIC-0.05□□□□□ -2.42
YBX1P67809 RPS29P8-201ENST00000445109 171 ntBASIC-0.05□□□□□ -2.42
YBX1P67809 Y_RNA.699-201ENST00000516803 93 ntBASIC-0.05□□□□□ -2.42
YBX1P67809 MIR4788-201ENST00000639104 80 ntBASIC-0.05□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 944 ms