Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 SNORD2-201ENST00000459163 69 ntBASIC0.45□□□□□ -2.34
CTGFP29279 RNU6-1238P-201ENST00000517215 102 ntBASIC0.45□□□□□ -2.34
CTGFP29279 MIR6507-201ENST00000613630 70 ntBASIC0.45□□□□□ -2.34
CTGFP29279 SNORD56B-201ENST00000384713 71 ntBASIC0.44□□□□□ -2.34
CTGFP29279 RNU7-55P-201ENST00000459426 62 ntBASIC0.44□□□□□ -2.34
CTGFP29279 RNU6-732P-201ENST00000516033 103 ntBASIC0.44□□□□□ -2.34
CTGFP29279 RNU6-1204P-201ENST00000363948 107 ntBASIC0.43□□□□□ -2.34
CTGFP29279 MIR548Q-201ENST00000408404 100 ntBASIC0.43□□□□□ -2.34
CTGFP29279 RNY3P8-201ENST00000411366 126 ntBASIC0.43□□□□□ -2.34
CTGFP29279 RNA5SP285-201ENST00000516619 119 ntBASIC0.43□□□□□ -2.34
CTGFP29279 SNORA62.5-201ENST00000516634 120 ntBASIC0.43□□□□□ -2.34
CTGFP29279 U7.6-201ENST00000610841 64 ntBASIC0.43□□□□□ -2.34
CTGFP29279 MIR6514-201ENST00000622549 70 ntBASIC0.43□□□□□ -2.34
CTGFP29279 RNA5SP98-201ENST00000363158 137 ntBASIC0.42□□□□□ -2.34
CTGFP29279 SNORA42.1-201ENST00000363515 137 ntBASIC0.42□□□□□ -2.34
CTGFP29279 RNU6-455P-201ENST00000384681 107 ntBASIC0.42□□□□□ -2.34
CTGFP29279 RNU6-1133P-201ENST00000410963 100 ntBASIC0.42□□□□□ -2.34
CTGFP29279 AC114755.3-201ENST00000481111 251 ntBASIC0.42□□□□□ -2.34
CTGFP29279 AC108740.1-201ENST00000498629 225 ntBASIC0.42□□□□□ -2.34
CTGFP29279 AC096531.1-201ENST00000419107 107 ntBASIC0.41□□□□□ -2.34
CTGFP29279 RNU6-973P-201ENST00000364690 107 ntBASIC0.4□□□□□ -2.35
CTGFP29279 RNA5SP163-201ENST00000410304 99 ntBASIC0.4□□□□□ -2.35
CTGFP29279 AC090625.1-201ENST00000357130 210 ntBASIC0.39□□□□□ -2.35
CTGFP29279 Y_RNA.345-201ENST00000365384 92 ntBASIC0.39□□□□□ -2.35
CTGFP29279 Y_RNA.613-201ENST00000410726 97 ntBASIC0.39□□□□□ -2.35
CTGFP29279 AL445193.1-201ENST00000441183 141 ntBASIC0.39□□□□□ -2.35
CTGFP29279 MIR6759-201ENST00000638110 65 ntBASIC0.39□□□□□ -2.35
CTGFP29279 MIR202-201ENST00000362219 110 ntBASIC0.38□□□□□ -2.35
CTGFP29279 RNU6-1111P-201ENST00000391118 107 ntBASIC0.38□□□□□ -2.35
CTGFP29279 RNU6-1326P-201ENST00000391262 107 ntBASIC0.38□□□□□ -2.35
CTGFP29279 SNORD111B-201ENST00000408587 80 ntBASIC0.38□□□□□ -2.35
CTGFP29279 AC244250.2-201ENST00000418731 148 ntBASIC0.38□□□□□ -2.35
CTGFP29279 MIR6086-201ENST00000638065 55 ntBASIC0.38□□□□□ -2.35
CTGFP29279 RNU6-608P-201ENST00000383927 104 ntBASIC0.37□□□□□ -2.35
CTGFP29279 MIR593-201ENST00000384856 100 ntBASIC0.37□□□□□ -2.35
CTGFP29279 RPL35AP4-201ENST00000412007 102 ntBASIC0.37□□□□□ -2.35
CTGFP29279 MIR6854-201ENST00000614935 69 ntBASIC0.37□□□□□ -2.35
CTGFP29279 MIR4426-201ENST00000640330 63 ntBASIC0.37□□□□□ -2.35
CTGFP29279 RNU6-1327P-201ENST00000365302 105 ntBASIC0.36□□□□□ -2.35
CTGFP29279 RNU6-900P-201ENST00000384498 102 ntBASIC0.36□□□□□ -2.35
CTGFP29279 SNORD38.3-201ENST00000516599 73 ntBASIC0.36□□□□□ -2.35
CTGFP29279 SNORA50A-201ENST00000384225 134 ntBASIC0.35□□□□□ -2.35
CTGFP29279 RNU6-300P-201ENST00000459080 104 ntBASIC0.35□□□□□ -2.35
CTGFP29279 MIR4280-201ENST00000582178 76 ntBASIC0.35□□□□□ -2.35
CTGFP29279 MIR655-201ENST00000362159 97 ntBASIC0.34□□□□□ -2.36
CTGFP29279 SNORA62.4-201ENST00000365504 151 ntBASIC0.34□□□□□ -2.36
CTGFP29279 MIR1468-201ENST00000410600 86 ntBASIC0.34□□□□□ -2.36
CTGFP29279 RNU6-180P-201ENST00000516697 61 ntBASIC0.33□□□□□ -2.36
CTGFP29279 AC069113.3-201ENST00000521019 150 ntBASIC0.33□□□□□ -2.36
CTGFP29279 Y_RNA.699-201ENST00000516803 93 ntBASIC0.32□□□□□ -2.36
CTGFP29279 RNU6-1233P-201ENST00000362922 102 ntBASIC0.31□□□□□ -2.36
CTGFP29279 RNU6-1047P-201ENST00000364418 107 ntBASIC0.31□□□□□ -2.36
CTGFP29279 RNU6-901P-201ENST00000384593 106 ntBASIC0.31□□□□□ -2.36
CTGFP29279 AC013734.1-201ENST00000619329 111 ntBASIC0.31□□□□□ -2.36
CTGFP29279 SNORD114-5-201ENST00000362928 70 ntBASIC0.3□□□□□ -2.36
CTGFP29279 SNORA27.2-201ENST00000363365 126 ntBASIC0.3□□□□□ -2.36
CTGFP29279 MIR581-201ENST00000384895 96 ntBASIC0.3□□□□□ -2.36
CTGFP29279 CR383656.4-201ENST00000546909 122 ntBASIC0.3□□□□□ -2.36
CTGFP29279 MIR5190-201ENST00000581537 80 ntBASIC0.3□□□□□ -2.36
CTGFP29279 AC104408.1-201ENST00000605241 170 ntBASIC0.3□□□□□ -2.36
CTGFP29279 SNORD45.2-201ENST00000363552 72 ntBASIC0.29□□□□□ -2.36
CTGFP29279 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.29□□□□□ -2.36
CTGFP29279 MIR4636-201ENST00000582271 80 ntBASIC0.29□□□□□ -2.36
CTGFP29279 MIR5683-201ENST00000636514 76 ntBASIC0.29□□□□□ -2.36
CTGFP29279 MIR145-201ENST00000384967 88 ntBASIC0.28□□□□□ -2.36
CTGFP29279 RNA5SP134-201ENST00000516492 96 ntBASIC0.28□□□□□ -2.36
CTGFP29279 RNA5SP169-201ENST00000517268 117 ntBASIC0.28□□□□□ -2.36
CTGFP29279 MIR4315-1-201ENST00000636800 73 ntBASIC0.28□□□□□ -2.36
CTGFP29279 MIR4317-201ENST00000637586 65 ntBASIC0.28□□□□□ -2.36
CTGFP29279 MIR4315-2-201ENST00000640925 73 ntBASIC0.28□□□□□ -2.36
CTGFP29279 RNU6-563P-201ENST00000364872 108 ntBASIC0.27□□□□□ -2.37
CTGFP29279 Y_RNA.321-201ENST00000365149 102 ntBASIC0.27□□□□□ -2.37
CTGFP29279 RNU6-929P-201ENST00000384429 107 ntBASIC0.27□□□□□ -2.37
CTGFP29279 SNORD18.2-201ENST00000459604 70 ntBASIC0.26□□□□□ -2.37
CTGFP29279 RNU6-485P-201ENST00000363475 107 ntBASIC0.25□□□□□ -2.37
CTGFP29279 RNU6-361P-201ENST00000364454 107 ntBASIC0.25□□□□□ -2.37
CTGFP29279 SNORD114-17-201ENST00000364699 75 ntBASIC0.25□□□□□ -2.37
CTGFP29279 MIR892B-201ENST00000401279 77 ntBASIC0.25□□□□□ -2.37
CTGFP29279 SNORD22.1-201ENST00000516331 125 ntBASIC0.25□□□□□ -2.37
CTGFP29279 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.25□□□□□ -2.37
CTGFP29279 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.25□□□□□ -2.37
CTGFP29279 SNORA26.4-201ENST00000391188 123 ntBASIC0.24□□□□□ -2.37
CTGFP29279 SNORA17.4-201ENST00000391287 132 ntBASIC0.24□□□□□ -2.37
CTGFP29279 U6.97-201ENST00000636904 101 ntBASIC0.24□□□□□ -2.37
CTGFP29279 MIR148A-201ENST00000362215 68 ntBASIC0.23□□□□□ -2.37
CTGFP29279 Y_RNA.320-201ENST00000365144 102 ntBASIC0.23□□□□□ -2.37
CTGFP29279 RNU7-165P-201ENST00000458864 60 ntBASIC0.23□□□□□ -2.37
CTGFP29279 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.23□□□□□ -2.37
CTGFP29279 RNU6-894P-201ENST00000517094 105 ntBASIC0.23□□□□□ -2.37
CTGFP29279 MIR4802-201ENST00000581881 80 ntBASIC0.23□□□□□ -2.37
CTGFP29279 MIR6851-201ENST00000617060 67 ntBASIC0.23□□□□□ -2.37
CTGFP29279 RNA5SP214-201ENST00000363378 118 ntBASIC0.22□□□□□ -2.37
CTGFP29279 MIR507-201ENST00000385234 94 ntBASIC0.22□□□□□ -2.37
CTGFP29279 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
CTGFP29279 RNU6-68P-201ENST00000516576 104 ntBASIC0.22□□□□□ -2.37
CTGFP29279 MIR4645-201ENST00000583158 77 ntBASIC0.22□□□□□ -2.37
CTGFP29279 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.22□□□□□ -2.37
CTGFP29279 AL590491.3-201ENST00000610731 82 ntBASIC0.21□□□□□ -2.38
CTGFP29279 SNORD114-9-201ENST00000364370 72 ntBASIC0.2□□□□□ -2.38
CTGFP29279 Y_RNA.382-201ENST00000365672 114 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 196.5 ms