Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 U4.4-201ENST00000620626 117 ntBASIC-0.6□□□□□ -2.51
COL5A3P25940 Y_RNA.313-201ENST00000365095 103 ntBASIC-0.61□□□□□ -2.51
COL5A3P25940 Y_RNA.426-201ENST00000384068 113 ntBASIC-0.61□□□□□ -2.51
COL5A3P25940 RNU6-24P-201ENST00000384440 107 ntBASIC-0.61□□□□□ -2.51
COL5A3P25940 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.61□□□□□ -2.51
COL5A3P25940 MIR154-201ENST00000385243 84 ntBASIC-0.61□□□□□ -2.51
COL5A3P25940 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.61□□□□□ -2.51
COL5A3P25940 MIR4306-201ENST00000583390 91 ntBASIC-0.61□□□□□ -2.51
COL5A3P25940 MIR548V-201ENST00000584165 80 ntBASIC-0.61□□□□□ -2.51
COL5A3P25940 MIR4499-201ENST00000584834 69 ntBASIC-0.61□□□□□ -2.51
COL5A3P25940 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.61□□□□□ -2.51
COL5A3P25940 MIR548C-201ENST00000384815 97 ntBASIC-0.61□□□□□ -2.51
COL5A3P25940 MIR527-201ENST00000385244 85 ntBASIC-0.61□□□□□ -2.51
COL5A3P25940 Y_RNA.593-201ENST00000410292 98 ntBASIC-0.61□□□□□ -2.51
COL5A3P25940 MIR1245B-201ENST00000636115 69 ntBASIC-0.61□□□□□ -2.51
COL5A3P25940 RNU4-61P-201ENST00000411243 107 ntBASIC-0.62□□□□□ -2.51
COL5A3P25940 AL353691.2-201ENST00000443795 59 ntBASIC-0.62□□□□□ -2.51
COL5A3P25940 MIR5588-201ENST00000581890 63 ntBASIC-0.62□□□□□ -2.51
COL5A3P25940 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.62□□□□□ -2.51
COL5A3P25940 RNU6-153P-201ENST00000364422 104 ntBASIC-0.63□□□□□ -2.51
COL5A3P25940 Y_RNA.403-201ENST00000383977 101 ntBASIC-0.63□□□□□ -2.51
COL5A3P25940 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.63□□□□□ -2.51
COL5A3P25940 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.63□□□□□ -2.51
COL5A3P25940 RNU6-315P-201ENST00000362666 107 ntBASIC-0.64□□□□□ -2.51
COL5A3P25940 Y_RNA.291-201ENST00000364886 113 ntBASIC-0.64□□□□□ -2.51
COL5A3P25940 RNU6-458P-201ENST00000384179 107 ntBASIC-0.64□□□□□ -2.51
COL5A3P25940 RNU6-820P-201ENST00000384273 107 ntBASIC-0.64□□□□□ -2.51
COL5A3P25940 MIR507-201ENST00000385234 94 ntBASIC-0.64□□□□□ -2.51
COL5A3P25940 RNU6-696P-201ENST00000390834 107 ntBASIC-0.64□□□□□ -2.51
COL5A3P25940 MIR548Q-201ENST00000408404 100 ntBASIC-0.64□□□□□ -2.51
COL5A3P25940 MIR5582-201ENST00000579697 68 ntBASIC-0.64□□□□□ -2.51
COL5A3P25940 MIR4484-201ENST00000582855 83 ntBASIC-0.64□□□□□ -2.51
COL5A3P25940 U6.58-201ENST00000613107 107 ntBASIC-0.64□□□□□ -2.51
COL5A3P25940 MIR494-201ENST00000349529 81 ntBASIC-0.64□□□□□ -2.51
COL5A3P25940 RNU6-668P-201ENST00000364180 107 ntBASIC-0.64□□□□□ -2.51
COL5A3P25940 SNORD45A-201ENST00000384512 84 ntBASIC-0.64□□□□□ -2.51
COL5A3P25940 uc_338.19-201ENST00000616808 99 ntBASIC-0.64□□□□□ -2.51
COL5A3P25940 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.65□□□□□ -2.51
COL5A3P25940 MIR5683-201ENST00000636514 76 ntBASIC-0.65□□□□□ -2.51
COL5A3P25940 Y_RNA.316-201ENST00000365118 111 ntBASIC-0.66□□□□□ -2.51
COL5A3P25940 RNU6-604P-201ENST00000390917 100 ntBASIC-0.66□□□□□ -2.51
COL5A3P25940 RNA5SP180-201ENST00000516181 101 ntBASIC-0.66□□□□□ -2.51
COL5A3P25940 U7.4-201ENST00000614961 63 ntBASIC-0.66□□□□□ -2.51
COL5A3P25940 MIR6818-201ENST00000621576 65 ntBASIC-0.66□□□□□ -2.51
COL5A3P25940 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.67□□□□□ -2.52
COL5A3P25940 RNU6-1276P-201ENST00000365372 104 ntBASIC-0.67□□□□□ -2.52
COL5A3P25940 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.67□□□□□ -2.52
COL5A3P25940 RNU6-542P-201ENST00000516405 103 ntBASIC-0.67□□□□□ -2.52
COL5A3P25940 MIR429-201ENST00000362106 83 ntBASIC-0.67□□□□□ -2.52
COL5A3P25940 RNA5SP26-201ENST00000362406 119 ntBASIC-0.67□□□□□ -2.52
COL5A3P25940 Y_RNA.369-201ENST00000365568 117 ntBASIC-0.67□□□□□ -2.52
COL5A3P25940 Y_RNA.694-201ENST00000516677 117 ntBASIC-0.67□□□□□ -2.52
COL5A3P25940 RNU6-706P-201ENST00000517229 104 ntBASIC-0.67□□□□□ -2.52
COL5A3P25940 Y_RNA.94-201ENST00000363068 106 ntBASIC-0.68□□□□□ -2.52
COL5A3P25940 MIR8485-201ENST00000401372 91 ntBASIC-0.68□□□□□ -2.52
COL5A3P25940 MIR4666B-201ENST00000578142 81 ntBASIC-0.68□□□□□ -2.52
COL5A3P25940 MIR548AA1-201ENST00000384971 97 ntBASIC-0.69□□□□□ -2.52
COL5A3P25940 RNU7-134P-201ENST00000458997 64 ntBASIC-0.69□□□□□ -2.52
COL5A3P25940 RNU6-732P-201ENST00000516033 103 ntBASIC-0.69□□□□□ -2.52
COL5A3P25940 MIR3115-201ENST00000577915 68 ntBASIC-0.69□□□□□ -2.52
COL5A3P25940 RNU6-787P-201ENST00000384032 107 ntBASIC-0.69□□□□□ -2.52
COL5A3P25940 RNU6-1152P-201ENST00000384576 107 ntBASIC-0.69□□□□□ -2.52
COL5A3P25940 RNU6-576P-201ENST00000390854 102 ntBASIC-0.69□□□□□ -2.52
COL5A3P25940 RNU6-630P-201ENST00000391258 106 ntBASIC-0.69□□□□□ -2.52
COL5A3P25940 RNY4-201ENST00000516507 96 ntBASIC-0.69□□□□□ -2.52
COL5A3P25940 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-0.69□□□□□ -2.52
COL5A3P25940 AC090616.4-201ENST00000448026 115 ntBASIC-0.7□□□□□ -2.52
COL5A3P25940 RNU7-151P-201ENST00000516930 53 ntBASIC-0.7□□□□□ -2.52
COL5A3P25940 MIR3134-201ENST00000579433 74 ntBASIC-0.7□□□□□ -2.52
COL5A3P25940 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.71□□□□□ -2.52
COL5A3P25940 MIR29B1-201ENST00000385015 81 ntBASIC-0.71□□□□□ -2.52
COL5A3P25940 MIR1255A-201ENST00000408338 113 ntBASIC-0.71□□□□□ -2.52
COL5A3P25940 RPL35AP4-201ENST00000412007 102 ntBASIC-0.71□□□□□ -2.52
COL5A3P25940 AC018880.2-201ENST00000414265 201 ntBASIC-0.71□□□□□ -2.52
COL5A3P25940 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.71□□□□□ -2.52
COL5A3P25940 RNU6-164P-201ENST00000364604 103 ntBASIC-0.72□□□□□ -2.52
COL5A3P25940 SNORD116-16-201ENST00000384533 92 ntBASIC-0.72□□□□□ -2.52
COL5A3P25940 SNORD116-24-201ENST00000384549 92 ntBASIC-0.72□□□□□ -2.52
COL5A3P25940 SNORA41B-201ENST00000384785 128 ntBASIC-0.72□□□□□ -2.52
COL5A3P25940 Y_RNA.603-201ENST00000410571 108 ntBASIC-0.72□□□□□ -2.52
COL5A3P25940 MIR4712-201ENST00000583750 82 ntBASIC-0.72□□□□□ -2.52
COL5A3P25940 U2.18-201ENST00000622185 84 ntBASIC-0.72□□□□□ -2.52
COL5A3P25940 Y_RNA.81-201ENST00000362997 102 ntBASIC-0.72□□□□□ -2.53
COL5A3P25940 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.72□□□□□ -2.53
COL5A3P25940 RNU6-573P-201ENST00000383938 106 ntBASIC-0.72□□□□□ -2.53
COL5A3P25940 RNU6-242P-201ENST00000384359 107 ntBASIC-0.72□□□□□ -2.53
COL5A3P25940 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-0.72□□□□□ -2.53
COL5A3P25940 RNU6-598P-201ENST00000364017 105 ntBASIC-0.73□□□□□ -2.53
COL5A3P25940 RNA5SP173-201ENST00000364857 136 ntBASIC-0.73□□□□□ -2.53
COL5A3P25940 SNORD115-31-201ENST00000365318 82 ntBASIC-0.73□□□□□ -2.53
COL5A3P25940 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-0.74□□□□□ -2.53
COL5A3P25940 RNU6-687P-201ENST00000516443 89 ntBASIC-0.74□□□□□ -2.53
COL5A3P25940 AC062037.1-201ENST00000605302 128 ntBASIC-0.74□□□□□ -2.53
COL5A3P25940 RNU6-895P-201ENST00000384125 103 ntBASIC-0.75□□□□□ -2.53
COL5A3P25940 AC138207.3-201ENST00000585289 166 ntBASIC-0.75□□□□□ -2.53
COL5A3P25940 Y_RNA.788-201ENST00000622394 112 ntBASIC-0.75□□□□□ -2.53
COL5A3P25940 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.75□□□□□ -2.53
COL5A3P25940 MIR4770-201ENST00000579149 58 ntBASIC-0.75□□□□□ -2.53
COL5A3P25940 MIR23C-201ENST00000579846 100 ntBASIC-0.75□□□□□ -2.53
COL5A3P25940 MIR3170-201ENST00000582699 77 ntBASIC-0.75□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 250.5 ms