Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.6□□□□□ -2.67
XRCC1P18887 SNORD113-1-201ENST00000365321 69 ntBASIC-1.6□□□□□ -2.67
XRCC1P18887 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.6□□□□□ -2.67
XRCC1P18887 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.6□□□□□ -2.67
XRCC1P18887 RNU6-267P-201ENST00000516714 103 ntBASIC-1.6□□□□□ -2.67
XRCC1P18887 MIR429-201ENST00000362106 83 ntBASIC-1.61□□□□□ -2.67
XRCC1P18887 RNU6-79P-201ENST00000362511 107 ntBASIC-1.61□□□□□ -2.67
XRCC1P18887 RNU6-330P-201ENST00000363015 107 ntBASIC-1.61□□□□□ -2.67
XRCC1P18887 RNU6-32P-201ENST00000383948 107 ntBASIC-1.61□□□□□ -2.67
XRCC1P18887 RNU6-13P-201ENST00000384248 107 ntBASIC-1.61□□□□□ -2.67
XRCC1P18887 RNU6-12P-201ENST00000384604 107 ntBASIC-1.61□□□□□ -2.67
XRCC1P18887 RNU6-41P-201ENST00000384741 107 ntBASIC-1.61□□□□□ -2.67
XRCC1P18887 RNU6-587P-201ENST00000391282 106 ntBASIC-1.61□□□□□ -2.67
XRCC1P18887 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.61□□□□□ -2.67
XRCC1P18887 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.61□□□□□ -2.67
XRCC1P18887 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.61□□□□□ -2.67
XRCC1P18887 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.61□□□□□ -2.67
XRCC1P18887 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.62□□□□□ -2.67
XRCC1P18887 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.62□□□□□ -2.67
XRCC1P18887 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.62□□□□□ -2.67
XRCC1P18887 MIR664B-201ENST00000626756 61 ntBASIC-1.62□□□□□ -2.67
XRCC1P18887 SNORD45.1-201ENST00000363181 77 ntBASIC-1.63□□□□□ -2.67
XRCC1P18887 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.63□□□□□ -2.67
XRCC1P18887 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.63□□□□□ -2.67
XRCC1P18887 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.63□□□□□ -2.67
XRCC1P18887 RNU6-608P-201ENST00000383927 104 ntBASIC-1.63□□□□□ -2.67
XRCC1P18887 RNU6-675P-201ENST00000384236 104 ntBASIC-1.64□□□□□ -2.67
XRCC1P18887 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.64□□□□□ -2.67
XRCC1P18887 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.64□□□□□ -2.67
XRCC1P18887 RNU6-604P-201ENST00000390917 100 ntBASIC-1.64□□□□□ -2.67
XRCC1P18887 RNU6-630P-201ENST00000391258 106 ntBASIC-1.64□□□□□ -2.67
XRCC1P18887 RNU6-698P-201ENST00000363523 107 ntBASIC-1.65□□□□□ -2.67
XRCC1P18887 RNU6-34P-201ENST00000364874 107 ntBASIC-1.65□□□□□ -2.67
XRCC1P18887 U4.4-201ENST00000620626 117 ntBASIC-1.65□□□□□ -2.67
XRCC1P18887 AC006160.2-201ENST00000637708 154 ntBASIC-1.65□□□□□ -2.67
XRCC1P18887 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.66□□□□□ -2.68
XRCC1P18887 RNU6-598P-201ENST00000364017 105 ntBASIC-1.66□□□□□ -2.68
XRCC1P18887 MIR520D-201ENST00000385002 87 ntBASIC-1.66□□□□□ -2.68
XRCC1P18887 RNU6-982P-201ENST00000516216 102 ntBASIC-1.66□□□□□ -2.68
XRCC1P18887 RNU6-980P-201ENST00000516925 103 ntBASIC-1.66□□□□□ -2.68
XRCC1P18887 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.67□□□□□ -2.68
XRCC1P18887 MTND4LP1-201ENST00000446263 157 ntBASIC-1.67□□□□□ -2.68
XRCC1P18887 RNU6-844P-201ENST00000517175 102 ntBASIC-1.67□□□□□ -2.68
XRCC1P18887 MIR3139-201ENST00000579145 76 ntBASIC-1.67□□□□□ -2.68
XRCC1P18887 MIR23C-201ENST00000579846 100 ntBASIC-1.68□□□□□ -2.68
XRCC1P18887 RNU6-640P-201ENST00000363693 105 ntBASIC-1.69□□□□□ -2.68
XRCC1P18887 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.69□□□□□ -2.68
XRCC1P18887 MIR488-201ENST00000365739 83 ntBASIC-1.69□□□□□ -2.68
XRCC1P18887 MIR8053-201ENST00000613344 75 ntBASIC-1.69□□□□□ -2.68
XRCC1P18887 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.7□□□□□ -2.68
XRCC1P18887 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.7□□□□□ -2.68
XRCC1P18887 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.7□□□□□ -2.68
XRCC1P18887 MIR548V-201ENST00000584165 80 ntBASIC-1.7□□□□□ -2.68
XRCC1P18887 RNU6-119P-201ENST00000364882 107 ntBASIC-1.71□□□□□ -2.68
XRCC1P18887 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.71□□□□□ -2.68
XRCC1P18887 RNA5SP215-201ENST00000363440 122 ntBASIC-1.72□□□□□ -2.68
XRCC1P18887 RNU6-147P-201ENST00000383983 107 ntBASIC-1.72□□□□□ -2.68
XRCC1P18887 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.72□□□□□ -2.68
XRCC1P18887 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.72□□□□□ -2.68
XRCC1P18887 RNU6-919P-201ENST00000516731 104 ntBASIC-1.72□□□□□ -2.68
XRCC1P18887 U2.18-201ENST00000622185 84 ntBASIC-1.72□□□□□ -2.68
XRCC1P18887 RNU6-315P-201ENST00000362666 107 ntBASIC-1.73□□□□□ -2.69
XRCC1P18887 RNA5SP405-201ENST00000363059 114 ntBASIC-1.73□□□□□ -2.69
XRCC1P18887 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.73□□□□□ -2.69
XRCC1P18887 RNU6-695P-201ENST00000391157 104 ntBASIC-1.73□□□□□ -2.69
XRCC1P18887 AL606753.1-201ENST00000427435 87 ntBASIC-1.73□□□□□ -2.69
XRCC1P18887 MT-TM-201ENST00000387377 68 ntBASIC-1.74□□□□□ -2.69
XRCC1P18887 MIR4484-201ENST00000582855 83 ntBASIC-1.74□□□□□ -2.69
XRCC1P18887 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.75□□□□□ -2.69
XRCC1P18887 RNU6-215P-201ENST00000365169 102 ntBASIC-1.75□□□□□ -2.69
XRCC1P18887 SNORD116-16-201ENST00000384533 92 ntBASIC-1.75□□□□□ -2.69
XRCC1P18887 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.75□□□□□ -2.69
XRCC1P18887 MIR3170-201ENST00000582699 77 ntBASIC-1.75□□□□□ -2.69
XRCC1P18887 SNORA63.4-201ENST00000362763 126 ntBASIC-1.76□□□□□ -2.69
XRCC1P18887 RNU6-668P-201ENST00000364180 107 ntBASIC-1.76□□□□□ -2.69
XRCC1P18887 RNU6-563P-201ENST00000364872 108 ntBASIC-1.76□□□□□ -2.69
XRCC1P18887 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.76□□□□□ -2.69
XRCC1P18887 MIR548AA1-201ENST00000384971 97 ntBASIC-1.76□□□□□ -2.69
XRCC1P18887 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.76□□□□□ -2.69
XRCC1P18887 IGLL4P-201ENST00000614590 133 ntBASIC-1.76□□□□□ -2.69
XRCC1P18887 RNA5SP173-201ENST00000364857 136 ntBASIC-1.77□□□□□ -2.69
XRCC1P18887 MIR630-201ENST00000384957 97 ntBASIC-1.77□□□□□ -2.69
XRCC1P18887 SNORD113-2-201ENST00000391082 72 ntBASIC-1.77□□□□□ -2.69
XRCC1P18887 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.77□□□□□ -2.69
XRCC1P18887 MIR3123-201ENST00000583417 75 ntBASIC-1.77□□□□□ -2.69
XRCC1P18887 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.78□□□□□ -2.69
XRCC1P18887 RNU6-789P-201ENST00000517105 102 ntBASIC-1.78□□□□□ -2.69
XRCC1P18887 AC120024.2-201ENST00000576526 175 ntBASIC-1.78□□□□□ -2.69
XRCC1P18887 RNA5SP93-201ENST00000362525 114 ntBASIC-1.79□□□□□ -2.7
XRCC1P18887 SNORD20-201ENST00000384550 80 ntBASIC-1.79□□□□□ -2.7
XRCC1P18887 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.79□□□□□ -2.7
XRCC1P18887 SNORD113.1-201ENST00000363280 73 ntBASIC-1.8□□□□□ -2.7
XRCC1P18887 MIR548AM-201ENST00000584298 74 ntBASIC-1.8□□□□□ -2.7
XRCC1P18887 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.8□□□□□ -2.7
XRCC1P18887 RNY1P1-201ENST00000364372 112 ntBASIC-1.81□□□□□ -2.7
XRCC1P18887 AL603908.1-201ENST00000406098 201 ntBASIC-1.81□□□□□ -2.7
XRCC1P18887 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.81□□□□□ -2.7
XRCC1P18887 RNU6-841P-201ENST00000383872 107 ntBASIC-1.82□□□□□ -2.7
XRCC1P18887 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.82□□□□□ -2.7
XRCC1P18887 SNORA41B-201ENST00000384785 128 ntBASIC-1.82□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 231.1 ms