Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 SNORA8.1-201ENST00000384250 140 ntBASIC-2.24□□□□□ -2.77
NCK1P16333 AC018880.2-201ENST00000414265 201 ntBASIC-2.24□□□□□ -2.77
NCK1P16333 MIR1297-201ENST00000637311 77 ntBASIC-2.24□□□□□ -2.77
NCK1P16333 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.25□□□□□ -2.77
NCK1P16333 RNU6-219P-201ENST00000364728 107 ntBASIC-2.25□□□□□ -2.77
NCK1P16333 AL031737.1-201ENST00000450125 223 ntBASIC-2.25□□□□□ -2.77
NCK1P16333 RNU6-1262P-201ENST00000516217 96 ntBASIC-2.25□□□□□ -2.77
NCK1P16333 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.25□□□□□ -2.77
NCK1P16333 MIRLET7A1-201ENST00000362295 80 ntBASIC-2.26□□□□□ -2.77
NCK1P16333 RNU6-1325P-201ENST00000364905 105 ntBASIC-2.26□□□□□ -2.77
NCK1P16333 RNU6-1191P-201ENST00000516799 107 ntBASIC-2.26□□□□□ -2.77
NCK1P16333 Y_RNA.709-201ENST00000516952 92 ntBASIC-2.26□□□□□ -2.77
NCK1P16333 AL365222.1-201ENST00000614661 98 ntBASIC-2.26□□□□□ -2.77
NCK1P16333 RNU6-330P-201ENST00000363015 107 ntBASIC-2.27□□□□□ -2.77
NCK1P16333 Y_RNA.273-201ENST00000364703 102 ntBASIC-2.27□□□□□ -2.77
NCK1P16333 RNU6-194P-201ENST00000363862 105 ntBASIC-2.28□□□□□ -2.77
NCK1P16333 Y_RNA.325-201ENST00000365171 122 ntBASIC-2.28□□□□□ -2.77
NCK1P16333 RNU6-604P-201ENST00000390917 100 ntBASIC-2.28□□□□□ -2.77
NCK1P16333 RPL35AP4-201ENST00000412007 102 ntBASIC-2.28□□□□□ -2.77
NCK1P16333 RNU6-79P-201ENST00000362511 107 ntBASIC-2.29□□□□□ -2.78
NCK1P16333 Y_RNA.103-201ENST00000363171 102 ntBASIC-2.29□□□□□ -2.78
NCK1P16333 SNORD45.1-201ENST00000363181 77 ntBASIC-2.29□□□□□ -2.78
NCK1P16333 RNU6-1168P-201ENST00000390831 104 ntBASIC-2.29□□□□□ -2.78
NCK1P16333 Y_RNA.603-201ENST00000410571 108 ntBASIC-2.29□□□□□ -2.78
NCK1P16333 SNORA40.13-201ENST00000516379 120 ntBASIC-2.29□□□□□ -2.78
NCK1P16333 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.29□□□□□ -2.78
NCK1P16333 MIR548BB-201ENST00000626714 66 ntBASIC-2.29□□□□□ -2.78
NCK1P16333 Y_RNA.109-201ENST00000363215 102 ntBASIC-2.3□□□□□ -2.78
NCK1P16333 RNA5SP215-201ENST00000363440 122 ntBASIC-2.3□□□□□ -2.78
NCK1P16333 RNU6-129P-201ENST00000391022 107 ntBASIC-2.3□□□□□ -2.78
NCK1P16333 RNU6-380P-201ENST00000410207 107 ntBASIC-2.3□□□□□ -2.78
NCK1P16333 MTND4LP1-201ENST00000446263 157 ntBASIC-2.3□□□□□ -2.78
NCK1P16333 AP001318.4-201ENST00000616637 121 ntBASIC-2.3□□□□□ -2.78
NCK1P16333 RNU6-1094P-201ENST00000362416 104 ntBASIC-2.31□□□□□ -2.78
NCK1P16333 MALAT1.1-201ENST00000618249 95 ntBASIC-2.31□□□□□ -2.78
NCK1P16333 RNU6-982P-201ENST00000516216 102 ntBASIC-2.32□□□□□ -2.78
NCK1P16333 U4.4-201ENST00000620626 117 ntBASIC-2.32□□□□□ -2.78
NCK1P16333 TMSB4XP3-201ENST00000445144 114 ntBASIC-2.33□□□□□ -2.78
NCK1P16333 MIR548V-201ENST00000584165 80 ntBASIC-2.33□□□□□ -2.78
NCK1P16333 MIR8053-201ENST00000613344 75 ntBASIC-2.33□□□□□ -2.78
NCK1P16333 RNU6-630P-201ENST00000391258 106 ntBASIC-2.34□□□□□ -2.78
NCK1P16333 RNU6-402P-201ENST00000410678 103 ntBASIC-2.34□□□□□ -2.78
NCK1P16333 RNU6-608P-201ENST00000383927 104 ntBASIC-2.35□□□□□ -2.79
NCK1P16333 RNU6-1117P-201ENST00000384525 104 ntBASIC-2.35□□□□□ -2.79
NCK1P16333 RNU6-598P-201ENST00000364017 105 ntBASIC-2.36□□□□□ -2.79
NCK1P16333 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.36□□□□□ -2.79
NCK1P16333 RNU6-22P-201ENST00000384355 107 ntBASIC-2.36□□□□□ -2.79
NCK1P16333 RNA5SP173-201ENST00000364857 136 ntBASIC-2.37□□□□□ -2.79
NCK1P16333 Y_RNA.186-201ENST00000363899 92 ntBASIC-2.38□□□□□ -2.79
NCK1P16333 RNU6-675P-201ENST00000384236 104 ntBASIC-2.38□□□□□ -2.79
NCK1P16333 Y_RNA.532-201ENST00000384590 113 ntBASIC-2.38□□□□□ -2.79
NCK1P16333 SNORD113-2-201ENST00000391082 72 ntBASIC-2.38□□□□□ -2.79
NCK1P16333 Y_RNA.175-201ENST00000363794 111 ntBASIC-2.39□□□□□ -2.79
NCK1P16333 RNU6-267P-201ENST00000516714 103 ntBASIC-2.39□□□□□ -2.79
NCK1P16333 MIR450A1-201ENST00000362262 91 ntBASIC-2.4□□□□□ -2.79
NCK1P16333 SNORD116-16-201ENST00000384533 92 ntBASIC-2.4□□□□□ -2.79
NCK1P16333 MIR548AA1-201ENST00000384971 97 ntBASIC-2.4□□□□□ -2.79
NCK1P16333 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-2.4□□□□□ -2.79
NCK1P16333 AC006160.2-201ENST00000637708 154 ntBASIC-2.4□□□□□ -2.79
NCK1P16333 RNU6-668P-201ENST00000364180 107 ntBASIC-2.41□□□□□ -2.8
NCK1P16333 Y_RNA.611-201ENST00000410682 108 ntBASIC-2.41□□□□□ -2.8
NCK1P16333 RNU6-755P-201ENST00000364400 103 ntBASIC-2.43□□□□□ -2.8
NCK1P16333 MIR520D-201ENST00000385002 87 ntBASIC-2.43□□□□□ -2.8
NCK1P16333 RNU6-1154P-201ENST00000391001 104 ntBASIC-2.44□□□□□ -2.8
NCK1P16333 RNU6-1111P-201ENST00000391118 107 ntBASIC-2.44□□□□□ -2.8
NCK1P16333 RNU6-315P-201ENST00000362666 107 ntBASIC-2.45□□□□□ -2.8
NCK1P16333 SNORD113.1-201ENST00000363280 73 ntBASIC-2.45□□□□□ -2.8
NCK1P16333 RNY4P18-201ENST00000391107 89 ntBASIC-2.45□□□□□ -2.8
NCK1P16333 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.45□□□□□ -2.8
NCK1P16333 RNU6-313P-201ENST00000516317 112 ntBASIC-2.45□□□□□ -2.8
NCK1P16333 MIR3668-201ENST00000582138 75 ntBASIC-2.45□□□□□ -2.8
NCK1P16333 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-2.45□□□□□ -2.8
NCK1P16333 Y_RNA.219-201ENST00000364232 113 ntBASIC-2.46□□□□□ -2.8
NCK1P16333 SNORA63.4-201ENST00000362763 126 ntBASIC-2.47□□□□□ -2.8
NCK1P16333 MIR630-201ENST00000384957 97 ntBASIC-2.47□□□□□ -2.8
NCK1P16333 Y_RNA.607-201ENST00000410597 98 ntBASIC-2.47□□□□□ -2.8
NCK1P16333 MIR3170-201ENST00000582699 77 ntBASIC-2.47□□□□□ -2.8
NCK1P16333 U2.18-201ENST00000622185 84 ntBASIC-2.47□□□□□ -2.8
NCK1P16333 Y_RNA.443-201ENST00000384135 111 ntBASIC-2.48□□□□□ -2.81
NCK1P16333 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.48□□□□□ -2.81
NCK1P16333 RNU4-88P-201ENST00000411220 86 ntBASIC-2.49□□□□□ -2.81
NCK1P16333 RNU6-844P-201ENST00000517175 102 ntBASIC-2.49□□□□□ -2.81
NCK1P16333 MIR3671-201ENST00000580455 88 ntBASIC-2.49□□□□□ -2.81
NCK1P16333 Y_RNA.313-201ENST00000365095 103 ntBASIC-2.5□□□□□ -2.81
NCK1P16333 RNU6-695P-201ENST00000391157 104 ntBASIC-2.5□□□□□ -2.81
NCK1P16333 MIR4484-201ENST00000582855 83 ntBASIC-2.5□□□□□ -2.81
NCK1P16333 RNU6-1079P-201ENST00000362861 110 ntBASIC-2.51□□□□□ -2.81
NCK1P16333 RNU6-32P-201ENST00000383948 107 ntBASIC-2.51□□□□□ -2.81
NCK1P16333 RNU6-13P-201ENST00000384248 107 ntBASIC-2.51□□□□□ -2.81
NCK1P16333 RNU6-12P-201ENST00000384604 107 ntBASIC-2.51□□□□□ -2.81
NCK1P16333 RNU6-41P-201ENST00000384741 107 ntBASIC-2.51□□□□□ -2.81
NCK1P16333 RNU6-230P-201ENST00000362457 104 ntBASIC-2.53□□□□□ -2.81
NCK1P16333 MIR548M-201ENST00000408260 86 ntBASIC-2.53□□□□□ -2.81
NCK1P16333 RNU6-1267P-201ENST00000410747 107 ntBASIC-2.53□□□□□ -2.81
NCK1P16333 MIR488-201ENST00000365739 83 ntBASIC-2.54□□□□□ -2.82
NCK1P16333 Y_RNA.699-201ENST00000516803 93 ntBASIC-2.54□□□□□ -2.82
NCK1P16333 MIR548AM-201ENST00000584298 74 ntBASIC-2.54□□□□□ -2.82
NCK1P16333 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-2.54□□□□□ -2.82
NCK1P16333 RNU6-640P-201ENST00000363693 105 ntBASIC-2.55□□□□□ -2.82
NCK1P16333 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.55□□□□□ -2.82
Retrieved 100 of 98,524 protein–RNA pairs in 194.2 ms