Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 RNU6-313P-201ENST00000516317 112 ntBASIC-1.76□□□□□ -2.69
CAPN1P07384 U4.4-201ENST00000620626 117 ntBASIC-1.76□□□□□ -2.69
CAPN1P07384 MIR429-201ENST00000362106 83 ntBASIC-1.77□□□□□ -2.69
CAPN1P07384 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.77□□□□□ -2.69
CAPN1P07384 RNU6-698P-201ENST00000363523 107 ntBASIC-1.77□□□□□ -2.69
CAPN1P07384 RNU6-34P-201ENST00000364874 107 ntBASIC-1.77□□□□□ -2.69
CAPN1P07384 MT-TR-201ENST00000387439 65 ntBASIC-1.77□□□□□ -2.69
CAPN1P07384 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.78□□□□□ -2.69
CAPN1P07384 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.78□□□□□ -2.69
CAPN1P07384 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.79□□□□□ -2.7
CAPN1P07384 MIR488-201ENST00000365739 83 ntBASIC-1.8□□□□□ -2.7
CAPN1P07384 RNU6-675P-201ENST00000384236 104 ntBASIC-1.8□□□□□ -2.7
CAPN1P07384 MIR548M-201ENST00000408260 86 ntBASIC-1.8□□□□□ -2.7
CAPN1P07384 MIR4484-201ENST00000582855 83 ntBASIC-1.8□□□□□ -2.7
CAPN1P07384 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.81□□□□□ -2.7
CAPN1P07384 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.81□□□□□ -2.7
CAPN1P07384 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.81□□□□□ -2.7
CAPN1P07384 MIR1297-201ENST00000637311 77 ntBASIC-1.81□□□□□ -2.7
CAPN1P07384 RNU6-640P-201ENST00000363693 105 ntBASIC-1.82□□□□□ -2.7
CAPN1P07384 RNU6-598P-201ENST00000364017 105 ntBASIC-1.82□□□□□ -2.7
CAPN1P07384 RNU6-755P-201ENST00000364400 103 ntBASIC-1.82□□□□□ -2.7
CAPN1P07384 MIR548V-201ENST00000584165 80 ntBASIC-1.82□□□□□ -2.7
CAPN1P07384 AC006160.2-201ENST00000637708 154 ntBASIC-1.82□□□□□ -2.7
CAPN1P07384 RNU6-79P-201ENST00000362511 107 ntBASIC-1.83□□□□□ -2.7
CAPN1P07384 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.83□□□□□ -2.7
CAPN1P07384 RNU6-630P-201ENST00000391258 106 ntBASIC-1.83□□□□□ -2.7
CAPN1P07384 MTND4LP1-201ENST00000446263 157 ntBASIC-1.83□□□□□ -2.7
CAPN1P07384 MIR496-201ENST00000385226 102 ntBASIC-1.84□□□□□ -2.7
CAPN1P07384 RNU6-400P-201ENST00000391173 106 ntBASIC-1.84□□□□□ -2.7
CAPN1P07384 MIR1207-201ENST00000408249 87 ntBASIC-1.84□□□□□ -2.7
CAPN1P07384 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.84□□□□□ -2.7
CAPN1P07384 RNU6-844P-201ENST00000517175 102 ntBASIC-1.84□□□□□ -2.7
CAPN1P07384 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.84□□□□□ -2.7
CAPN1P07384 RNU6-608P-201ENST00000383927 104 ntBASIC-1.85□□□□□ -2.71
CAPN1P07384 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.85□□□□□ -2.71
CAPN1P07384 AC018880.2-201ENST00000414265 201 ntBASIC-1.85□□□□□ -2.71
CAPN1P07384 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.85□□□□□ -2.71
CAPN1P07384 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.85□□□□□ -2.71
CAPN1P07384 RNU6-32P-201ENST00000383948 107 ntBASIC-1.86□□□□□ -2.71
CAPN1P07384 RNU6-13P-201ENST00000384248 107 ntBASIC-1.86□□□□□ -2.71
CAPN1P07384 RNU6-12P-201ENST00000384604 107 ntBASIC-1.86□□□□□ -2.71
CAPN1P07384 RNU6-41P-201ENST00000384741 107 ntBASIC-1.86□□□□□ -2.71
CAPN1P07384 MIR520D-201ENST00000385002 87 ntBASIC-1.86□□□□□ -2.71
CAPN1P07384 MIR8053-201ENST00000613344 75 ntBASIC-1.86□□□□□ -2.71
CAPN1P07384 U2.18-201ENST00000622185 84 ntBASIC-1.86□□□□□ -2.71
CAPN1P07384 RNA5SP215-201ENST00000363440 122 ntBASIC-1.87□□□□□ -2.71
CAPN1P07384 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.87□□□□□ -2.71
CAPN1P07384 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.87□□□□□ -2.71
CAPN1P07384 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.87□□□□□ -2.71
CAPN1P07384 MIR630-201ENST00000384957 97 ntBASIC-1.87□□□□□ -2.71
CAPN1P07384 MIR3139-201ENST00000579145 76 ntBASIC-1.87□□□□□ -2.71
CAPN1P07384 MIR664B-201ENST00000626756 61 ntBASIC-1.87□□□□□ -2.71
CAPN1P07384 RNU6-380P-201ENST00000410207 107 ntBASIC-1.88□□□□□ -2.71
CAPN1P07384 MIR3910-1-201ENST00000580936 111 ntBASIC-1.88□□□□□ -2.71
CAPN1P07384 SNORD113.1-201ENST00000363280 73 ntBASIC-1.89□□□□□ -2.71
CAPN1P07384 RNU6-668P-201ENST00000364180 107 ntBASIC-1.89□□□□□ -2.71
CAPN1P07384 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.9□□□□□ -2.71
CAPN1P07384 SNORD116-16-201ENST00000384533 92 ntBASIC-1.9□□□□□ -2.71
CAPN1P07384 SNORD113-2-201ENST00000391082 72 ntBASIC-1.9□□□□□ -2.71
CAPN1P07384 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.9□□□□□ -2.71
CAPN1P07384 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.91□□□□□ -2.72
CAPN1P07384 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.91□□□□□ -2.72
CAPN1P07384 RNU6-119P-201ENST00000364882 107 ntBASIC-1.91□□□□□ -2.72
CAPN1P07384 SNORD45A-201ENST00000384512 84 ntBASIC-1.91□□□□□ -2.72
CAPN1P07384 RNU6-980P-201ENST00000516925 103 ntBASIC-1.91□□□□□ -2.72
CAPN1P07384 RNU6-315P-201ENST00000362666 107 ntBASIC-1.92□□□□□ -2.72
CAPN1P07384 SNORA63.4-201ENST00000362763 126 ntBASIC-1.92□□□□□ -2.72
CAPN1P07384 RNU6-147P-201ENST00000383983 107 ntBASIC-1.92□□□□□ -2.72
CAPN1P07384 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.92□□□□□ -2.72
CAPN1P07384 SNORD113-1-201ENST00000365321 69 ntBASIC-1.93□□□□□ -2.72
CAPN1P07384 MT-TM-201ENST00000387377 68 ntBASIC-1.93□□□□□ -2.72
CAPN1P07384 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.93□□□□□ -2.72
CAPN1P07384 MIR664A-201ENST00000626086 82 ntBASIC-1.93□□□□□ -2.72
CAPN1P07384 RNU6-695P-201ENST00000391157 104 ntBASIC-1.94□□□□□ -2.72
CAPN1P07384 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.94□□□□□ -2.72
CAPN1P07384 RNA5SP173-201ENST00000364857 136 ntBASIC-1.95□□□□□ -2.72
CAPN1P07384 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.95□□□□□ -2.72
CAPN1P07384 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.96□□□□□ -2.72
CAPN1P07384 RNA5SP405-201ENST00000363059 114 ntBASIC-1.96□□□□□ -2.72
CAPN1P07384 MIR548AA1-201ENST00000384971 97 ntBASIC-1.96□□□□□ -2.72
CAPN1P07384 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.96□□□□□ -2.72
CAPN1P07384 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.96□□□□□ -2.72
CAPN1P07384 MIR3170-201ENST00000582699 77 ntBASIC-1.96□□□□□ -2.72
CAPN1P07384 RNU6-194P-201ENST00000363862 105 ntBASIC-1.97□□□□□ -2.72
CAPN1P07384 SNORA41B-201ENST00000384785 128 ntBASIC-1.97□□□□□ -2.72
CAPN1P07384 SNORD1B-201ENST00000363091 84 ntBASIC-1.98□□□□□ -2.73
CAPN1P07384 MIR23C-201ENST00000579846 100 ntBASIC-1.98□□□□□ -2.73
CAPN1P07384 MIR3123-201ENST00000583417 75 ntBASIC-1.98□□□□□ -2.73
CAPN1P07384 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.99□□□□□ -2.73
CAPN1P07384 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.99□□□□□ -2.73
CAPN1P07384 MIR5588-201ENST00000581890 63 ntBASIC-1.99□□□□□ -2.73
CAPN1P07384 RNU6-563P-201ENST00000364872 108 ntBASIC-2□□□□□ -2.73
CAPN1P07384 RNU4-88P-201ENST00000411220 86 ntBASIC-2□□□□□ -2.73
CAPN1P07384 Y_RNA.313-201ENST00000365095 103 ntBASIC-2.01□□□□□ -2.73
CAPN1P07384 RNU6-215P-201ENST00000365169 102 ntBASIC-2.01□□□□□ -2.73
CAPN1P07384 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.01□□□□□ -2.73
CAPN1P07384 MIR548AM-201ENST00000584298 74 ntBASIC-2.01□□□□□ -2.73
CAPN1P07384 IGLL4P-201ENST00000614590 133 ntBASIC-2.01□□□□□ -2.73
CAPN1P07384 RNY1P1-201ENST00000364372 112 ntBASIC-2.02□□□□□ -2.73
CAPN1P07384 RNU6-1131P-201ENST00000364955 107 ntBASIC-2.02□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 173.1 ms