Protein–RNA interactions for Protein: P05556

ITGB1, Integrin beta-1, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1P05556 SNORD114-16-201ENST00000363044 70 ntBASIC0.04□□□□□ -2.4
ITGB1P05556 RNA5SP25-201ENST00000410815 110 ntBASIC0.04□□□□□ -2.4
ITGB1P05556 AC114755.3-201ENST00000481111 251 ntBASIC0.04□□□□□ -2.4
ITGB1P05556 MIR124-2-201ENST00000385081 109 ntBASIC0.03□□□□□ -2.4
ITGB1P05556 SNORA40.16-201ENST00000517238 121 ntBASIC0.03□□□□□ -2.4
ITGB1P05556 MIR4280-201ENST00000582178 76 ntBASIC0.03□□□□□ -2.4
ITGB1P05556 SNORA18.1-201ENST00000363418 128 ntBASIC0.02□□□□□ -2.41
ITGB1P05556 RNU6-810P-201ENST00000364001 107 ntBASIC0.02□□□□□ -2.41
ITGB1P05556 RNU6-1262P-201ENST00000516217 96 ntBASIC0.02□□□□□ -2.41
ITGB1P05556 IGLVI-20-201ENST00000519296 130 ntBASIC0.02□□□□□ -2.41
ITGB1P05556 SNORD114-31-201ENST00000363219 75 ntBASIC0.01□□□□□ -2.41
ITGB1P05556 RNA5SP368-201ENST00000364298 116 ntBASIC0.01□□□□□ -2.41
ITGB1P05556 MIR579-201ENST00000385221 98 ntBASIC0.01□□□□□ -2.41
ITGB1P05556 snoU13.19-201ENST00000459148 104 ntBASIC0.01□□□□□ -2.41
ITGB1P05556 MIR4263-201ENST00000584745 83 ntBASIC0.01□□□□□ -2.41
ITGB1P05556 RNU6-30P-201ENST00000384561 107 ntBASIC0□□□□□ -2.41
ITGB1P05556 RNU6-696P-201ENST00000390834 107 ntBASIC0□□□□□ -2.41
ITGB1P05556 SNORD38.3-201ENST00000516599 73 ntBASIC0□□□□□ -2.41
ITGB1P05556 RNU6-1174P-201ENST00000517278 101 ntBASIC0□□□□□ -2.41
ITGB1P05556 RNU6-924P-201ENST00000362926 108 ntBASIC-0.01□□□□□ -2.41
ITGB1P05556 RNU6-987P-201ENST00000384759 104 ntBASIC-0.01□□□□□ -2.41
ITGB1P05556 RNU4-37P-201ENST00000410214 84 ntBASIC-0.01□□□□□ -2.41
ITGB1P05556 RNU6-758P-201ENST00000516292 89 ntBASIC-0.01□□□□□ -2.41
ITGB1P05556 MIR7978-201ENST00000636158 59 ntBASIC-0.01□□□□□ -2.41
ITGB1P05556 SNORD114-12-201ENST00000365400 75 ntBASIC-0.02□□□□□ -2.41
ITGB1P05556 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.02□□□□□ -2.41
ITGB1P05556 RNU7-151P-201ENST00000516930 53 ntBASIC-0.02□□□□□ -2.41
ITGB1P05556 MIR3666-201ENST00000607845 111 ntBASIC-0.02□□□□□ -2.41
ITGB1P05556 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.02□□□□□ -2.41
ITGB1P05556 SNORA40B-201ENST00000385573 128 ntBASIC-0.03□□□□□ -2.41
ITGB1P05556 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.03□□□□□ -2.41
ITGB1P05556 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.03□□□□□ -2.41
ITGB1P05556 AL590491.3-201ENST00000610731 82 ntBASIC-0.03□□□□□ -2.41
ITGB1P05556 SNORD114-15-201ENST00000364687 72 ntBASIC-0.04□□□□□ -2.42
ITGB1P05556 RNA5SP66-201ENST00000517178 101 ntBASIC-0.04□□□□□ -2.42
ITGB1P05556 MIR4490-201ENST00000582647 84 ntBASIC-0.04□□□□□ -2.42
ITGB1P05556 AP001180.6-201ENST00000584918 159 ntBASIC-0.04□□□□□ -2.42
ITGB1P05556 MIR6851-201ENST00000617060 67 ntBASIC-0.04□□□□□ -2.42
ITGB1P05556 SNORD74.6-201ENST00000364796 70 ntBASIC-0.05□□□□□ -2.42
ITGB1P05556 SNORD57-201ENST00000448188 72 ntBASIC-0.05□□□□□ -2.42
ITGB1P05556 MIR4493-201ENST00000584016 73 ntBASIC-0.05□□□□□ -2.42
ITGB1P05556 MIR548AA1-201ENST00000384971 97 ntBASIC-0.06□□□□□ -2.42
ITGB1P05556 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
ITGB1P05556 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.06□□□□□ -2.42
ITGB1P05556 SNORA13-201ENST00000458790 133 ntBASIC-0.06□□□□□ -2.42
ITGB1P05556 SNORD4A-201ENST00000459174 72 ntBASIC-0.06□□□□□ -2.42
ITGB1P05556 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.06□□□□□ -2.42
ITGB1P05556 RNA5SP169-201ENST00000517268 117 ntBASIC-0.06□□□□□ -2.42
ITGB1P05556 AC093726.3-201ENST00000637588 150 ntBASIC-0.06□□□□□ -2.42
ITGB1P05556 SNORD114-11-201ENST00000363738 75 ntBASIC-0.07□□□□□ -2.42
ITGB1P05556 RNU6-936P-201ENST00000384005 107 ntBASIC-0.07□□□□□ -2.42
ITGB1P05556 RNU6-732P-201ENST00000516033 103 ntBASIC-0.07□□□□□ -2.42
ITGB1P05556 SNORD63.1-201ENST00000516178 80 ntBASIC-0.07□□□□□ -2.42
ITGB1P05556 MIR604-201ENST00000384880 94 ntBASIC-0.08□□□□□ -2.42
ITGB1P05556 MIR214-201ENST00000385214 110 ntBASIC-0.09□□□□□ -2.42
ITGB1P05556 RNU6-995P-201ENST00000391244 107 ntBASIC-0.09□□□□□ -2.42
ITGB1P05556 RNU7-160P-201ENST00000516660 62 ntBASIC-0.09□□□□□ -2.42
ITGB1P05556 SNORD18.2-201ENST00000459604 70 ntBASIC-0.1□□□□□ -2.43
ITGB1P05556 Y_RNA.722-201ENST00000517279 114 ntBASIC-0.1□□□□□ -2.43
ITGB1P05556 MIR4645-201ENST00000583158 77 ntBASIC-0.1□□□□□ -2.43
ITGB1P05556 RNA5SP300-201ENST00000391197 107 ntBASIC-0.11□□□□□ -2.43
ITGB1P05556 RNU6-141P-201ENST00000410499 105 ntBASIC-0.11□□□□□ -2.43
ITGB1P05556 SNORD22.1-201ENST00000516331 125 ntBASIC-0.11□□□□□ -2.43
ITGB1P05556 Y_RNA.69-201ENST00000362885 109 ntBASIC-0.12□□□□□ -2.43
ITGB1P05556 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.12□□□□□ -2.43
ITGB1P05556 SNORA32.1-201ENST00000364514 115 ntBASIC-0.12□□□□□ -2.43
ITGB1P05556 MIR518B-201ENST00000385127 83 ntBASIC-0.12□□□□□ -2.43
ITGB1P05556 MIR4788-201ENST00000639104 80 ntBASIC-0.12□□□□□ -2.43
ITGB1P05556 MIR101-1-201ENST00000362265 75 ntBASIC-0.13□□□□□ -2.43
ITGB1P05556 SNORD19-201ENST00000391191 68 ntBASIC-0.13□□□□□ -2.43
ITGB1P05556 SNORD95.1-201ENST00000364099 68 ntBASIC-0.14□□□□□ -2.43
ITGB1P05556 RNA5SP331-201ENST00000364986 107 ntBASIC-0.14□□□□□ -2.43
ITGB1P05556 MIR125B1-201ENST00000385236 88 ntBASIC-0.14□□□□□ -2.43
ITGB1P05556 MIR548Q-201ENST00000408404 100 ntBASIC-0.14□□□□□ -2.43
ITGB1P05556 RNU6-1206P-201ENST00000516339 103 ntBASIC-0.15□□□□□ -2.43
ITGB1P05556 MIR3170-201ENST00000582699 77 ntBASIC-0.15□□□□□ -2.43
ITGB1P05556 MIR204-201ENST00000385200 110 ntBASIC-0.16□□□□□ -2.44
ITGB1P05556 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.16□□□□□ -2.44
ITGB1P05556 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.16□□□□□ -2.44
ITGB1P05556 RNU6-980P-201ENST00000516925 103 ntBASIC-0.16□□□□□ -2.44
ITGB1P05556 MIR548X-201ENST00000580069 75 ntBASIC-0.16□□□□□ -2.44
ITGB1P05556 SNORD114-28-201ENST00000363610 72 ntBASIC-0.17□□□□□ -2.44
ITGB1P05556 RNU6-808P-201ENST00000391233 108 ntBASIC-0.17□□□□□ -2.44
ITGB1P05556 SNORD75.1-201ENST00000408373 60 ntBASIC-0.17□□□□□ -2.44
ITGB1P05556 RNU6-721P-201ENST00000410155 105 ntBASIC-0.17□□□□□ -2.44
ITGB1P05556 AP002795.1-201ENST00000534879 84 ntBASIC-0.17□□□□□ -2.44
ITGB1P05556 RNU6-974P-201ENST00000384099 108 ntBASIC-0.18□□□□□ -2.44
ITGB1P05556 RPS29P8-201ENST00000445109 171 ntBASIC-0.18□□□□□ -2.44
ITGB1P05556 AP000533.3-201ENST00000447704 118 ntBASIC-0.18□□□□□ -2.44
ITGB1P05556 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.18□□□□□ -2.44
ITGB1P05556 MIR3179-1-201ENST00000578940 84 ntBASIC-0.18□□□□□ -2.44
ITGB1P05556 MIR3179-2-201ENST00000579107 84 ntBASIC-0.18□□□□□ -2.44
ITGB1P05556 MIR3179-3-201ENST00000579566 84 ntBASIC-0.18□□□□□ -2.44
ITGB1P05556 MIR3179-4-201ENST00000617599 84 ntBASIC-0.18□□□□□ -2.44
ITGB1P05556 MTRNR2L9-201ENST00000622562 75 ntBASIC-0.18□□□□□ -2.44
ITGB1P05556 Y_RNA.139-201ENST00000363464 102 ntBASIC-0.19□□□□□ -2.44
ITGB1P05556 RNA5SP451-201ENST00000410588 110 ntBASIC-0.19□□□□□ -2.44
ITGB1P05556 RNU6-419P-201ENST00000517030 63 ntBASIC-0.19□□□□□ -2.44
ITGB1P05556 SNORD115-33-201ENST00000363723 82 ntBASIC-0.2□□□□□ -2.44
ITGB1P05556 RNU4-33P-201ENST00000364316 85 ntBASIC-0.2□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 7.6 ms