Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 SNORD56B-201ENST00000384713 71 ntBASIC0.12□□□□□ -2.39
COL2A1P02458 SNORD38.3-201ENST00000516599 73 ntBASIC0.12□□□□□ -2.39
COL2A1P02458 RNU7-151P-201ENST00000516930 53 ntBASIC0.12□□□□□ -2.39
COL2A1P02458 MIR4667-201ENST00000578933 66 ntBASIC0.12□□□□□ -2.39
COL2A1P02458 MIR7110-201ENST00000612638 86 ntBASIC0.12□□□□□ -2.39
COL2A1P02458 AL445584.3-201ENST00000617173 78 ntBASIC0.12□□□□□ -2.39
COL2A1P02458 RNU6-900P-201ENST00000384498 102 ntBASIC0.11□□□□□ -2.39
COL2A1P02458 SNORD57-201ENST00000448188 72 ntBASIC0.11□□□□□ -2.39
COL2A1P02458 RNU7-55P-201ENST00000459426 62 ntBASIC0.11□□□□□ -2.39
COL2A1P02458 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.11□□□□□ -2.39
COL2A1P02458 MIR4490-201ENST00000582647 84 ntBASIC0.11□□□□□ -2.39
COL2A1P02458 MIR371B-201ENST00000638082 66 ntBASIC0.11□□□□□ -2.39
COL2A1P02458 RNU7-159P-201ENST00000459284 62 ntBASIC0.1□□□□□ -2.39
COL2A1P02458 SNORA40.16-201ENST00000517238 121 ntBASIC0.1□□□□□ -2.39
COL2A1P02458 MIR101-1-201ENST00000362265 75 ntBASIC0.1□□□□□ -2.39
COL2A1P02458 RNU6-973P-201ENST00000364690 107 ntBASIC0.1□□□□□ -2.39
COL2A1P02458 RNU7-165P-201ENST00000458864 60 ntBASIC0.1□□□□□ -2.39
COL2A1P02458 MIR6854-201ENST00000614935 69 ntBASIC0.1□□□□□ -2.39
COL2A1P02458 RNU6-974P-201ENST00000384099 108 ntBASIC0.09□□□□□ -2.4
COL2A1P02458 MIR892B-201ENST00000401279 77 ntBASIC0.09□□□□□ -2.4
COL2A1P02458 SNX3P1X-201ENST00000414887 175 ntBASIC0.09□□□□□ -2.4
COL2A1P02458 RPS29P8-201ENST00000445109 171 ntBASIC0.09□□□□□ -2.4
COL2A1P02458 AC114755.3-201ENST00000481111 251 ntBASIC0.09□□□□□ -2.4
COL2A1P02458 RNU6-1174P-201ENST00000517278 101 ntBASIC0.09□□□□□ -2.4
COL2A1P02458 MIR4280-201ENST00000582178 76 ntBASIC0.09□□□□□ -2.4
COL2A1P02458 MIR655-201ENST00000362159 97 ntBASIC0.08□□□□□ -2.4
COL2A1P02458 SNORD114-12-201ENST00000365400 75 ntBASIC0.08□□□□□ -2.4
COL2A1P02458 RNU6-1267P-201ENST00000410747 107 ntBASIC0.08□□□□□ -2.4
COL2A1P02458 AC096531.1-201ENST00000419107 107 ntBASIC0.08□□□□□ -2.4
COL2A1P02458 Y_RNA.722-201ENST00000517279 114 ntBASIC0.08□□□□□ -2.4
COL2A1P02458 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.08□□□□□ -2.4
COL2A1P02458 RNU6-520P-201ENST00000384717 104 ntBASIC0.07□□□□□ -2.4
COL2A1P02458 MIR548Q-201ENST00000408404 100 ntBASIC0.07□□□□□ -2.4
COL2A1P02458 RNU7-119P-201ENST00000459279 63 ntBASIC0.07□□□□□ -2.4
COL2A1P02458 SNORD114-16-201ENST00000363044 70 ntBASIC0.05□□□□□ -2.4
COL2A1P02458 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
COL2A1P02458 RNU6-141P-201ENST00000410499 105 ntBASIC0.05□□□□□ -2.4
COL2A1P02458 SNORD18.2-201ENST00000459604 70 ntBASIC0.05□□□□□ -2.4
COL2A1P02458 MIR429-201ENST00000362106 83 ntBASIC0.04□□□□□ -2.4
COL2A1P02458 SNORD49B-201ENST00000365172 72 ntBASIC0.04□□□□□ -2.4
COL2A1P02458 SNORA62.4-201ENST00000365504 151 ntBASIC0.04□□□□□ -2.4
COL2A1P02458 RNU6-46P-201ENST00000383860 107 ntBASIC0.04□□□□□ -2.4
COL2A1P02458 SNORA40B-201ENST00000385573 128 ntBASIC0.04□□□□□ -2.4
COL2A1P02458 RNU6-696P-201ENST00000390834 107 ntBASIC0.04□□□□□ -2.4
COL2A1P02458 RNU6-753P-201ENST00000363926 107 ntBASIC0.03□□□□□ -2.4
COL2A1P02458 SNORD19-201ENST00000391191 68 ntBASIC0.03□□□□□ -2.4
COL2A1P02458 RNU6-1238P-201ENST00000517215 102 ntBASIC0.03□□□□□ -2.4
COL2A1P02458 RNA5SP169-201ENST00000517268 117 ntBASIC0.03□□□□□ -2.4
COL2A1P02458 AP002795.1-201ENST00000534879 84 ntBASIC0.03□□□□□ -2.4
COL2A1P02458 MIR4645-201ENST00000583158 77 ntBASIC0.03□□□□□ -2.4
COL2A1P02458 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC0.03□□□□□ -2.4
COL2A1P02458 RNU6-924P-201ENST00000362926 108 ntBASIC0.03□□□□□ -2.41
COL2A1P02458 RNU6-1184P-201ENST00000384588 108 ntBASIC0.03□□□□□ -2.41
COL2A1P02458 MIR548AA1-201ENST00000384971 97 ntBASIC0.03□□□□□ -2.41
COL2A1P02458 RNY1P9-201ENST00000532431 109 ntBASIC0.03□□□□□ -2.41
COL2A1P02458 MIR548AX-201ENST00000580117 73 ntBASIC0.03□□□□□ -2.41
COL2A1P02458 MIR148A-201ENST00000362215 68 ntBASIC0.02□□□□□ -2.41
COL2A1P02458 MIR214-201ENST00000385214 110 ntBASIC0.02□□□□□ -2.41
COL2A1P02458 RNU6-995P-201ENST00000391244 107 ntBASIC0.02□□□□□ -2.41
COL2A1P02458 SNORD63.1-201ENST00000516178 80 ntBASIC0.02□□□□□ -2.41
COL2A1P02458 SNORA42.1-201ENST00000363515 137 ntBASIC0.01□□□□□ -2.41
COL2A1P02458 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC0.01□□□□□ -2.41
COL2A1P02458 SNORD22.1-201ENST00000516331 125 ntBASIC0.01□□□□□ -2.41
COL2A1P02458 Y_RNA.613-201ENST00000410726 97 ntBASIC0□□□□□ -2.41
COL2A1P02458 RNU4-88P-201ENST00000411220 86 ntBASIC0□□□□□ -2.41
COL2A1P02458 Y_RNA.69-201ENST00000362885 109 ntBASIC-0.01□□□□□ -2.41
COL2A1P02458 SNORD114-11-201ENST00000363738 75 ntBASIC-0.01□□□□□ -2.41
COL2A1P02458 RNU4-33P-201ENST00000364316 85 ntBASIC-0.01□□□□□ -2.41
COL2A1P02458 RNU6-732P-201ENST00000516033 103 ntBASIC-0.01□□□□□ -2.41
COL2A1P02458 SNORD63.2-201ENST00000516303 64 ntBASIC-0.01□□□□□ -2.41
COL2A1P02458 MIR548X-201ENST00000580069 75 ntBASIC-0.01□□□□□ -2.41
COL2A1P02458 Y_RNA.139-201ENST00000363464 102 ntBASIC-0.02□□□□□ -2.41
COL2A1P02458 MIR204-201ENST00000385200 110 ntBASIC-0.02□□□□□ -2.41
COL2A1P02458 RNU6-808P-201ENST00000391233 108 ntBASIC-0.02□□□□□ -2.41
COL2A1P02458 RPL35AP4-201ENST00000412007 102 ntBASIC-0.02□□□□□ -2.41
COL2A1P02458 MIR3170-201ENST00000582699 77 ntBASIC-0.02□□□□□ -2.41
COL2A1P02458 AL590491.3-201ENST00000610731 82 ntBASIC-0.02□□□□□ -2.41
COL2A1P02458 RNU6-247P-201ENST00000362636 107 ntBASIC-0.03□□□□□ -2.41
COL2A1P02458 SNORD114-28-201ENST00000363610 72 ntBASIC-0.03□□□□□ -2.41
COL2A1P02458 SNORD114-17-201ENST00000364699 75 ntBASIC-0.03□□□□□ -2.41
COL2A1P02458 MIR520D-201ENST00000385002 87 ntBASIC-0.03□□□□□ -2.41
COL2A1P02458 RNU6-258P-201ENST00000390884 101 ntBASIC-0.03□□□□□ -2.41
COL2A1P02458 AP000533.3-201ENST00000447704 118 ntBASIC-0.03□□□□□ -2.41
COL2A1P02458 RNU6-980P-201ENST00000516925 103 ntBASIC-0.03□□□□□ -2.41
COL2A1P02458 RNA5SP66-201ENST00000517178 101 ntBASIC-0.03□□□□□ -2.41
COL2A1P02458 MIR4290-201ENST00000583807 95 ntBASIC-0.03□□□□□ -2.41
COL2A1P02458 MIR6851-201ENST00000617060 67 ntBASIC-0.03□□□□□ -2.41
COL2A1P02458 RNA5SP451-201ENST00000410588 110 ntBASIC-0.03□□□□□ -2.41
COL2A1P02458 MIR4743-201ENST00000584576 69 ntBASIC-0.03□□□□□ -2.41
COL2A1P02458 MIR224-201ENST00000384889 81 ntBASIC-0.04□□□□□ -2.42
COL2A1P02458 MIR518B-201ENST00000385127 83 ntBASIC-0.04□□□□□ -2.42
COL2A1P02458 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.04□□□□□ -2.42
COL2A1P02458 RNU6-721P-201ENST00000410155 105 ntBASIC-0.04□□□□□ -2.42
COL2A1P02458 MIR1295B-201ENST00000636144 60 ntBASIC-0.04□□□□□ -2.42
COL2A1P02458 MIR4788-201ENST00000639104 80 ntBASIC-0.04□□□□□ -2.42
COL2A1P02458 RNU6-1206P-201ENST00000516339 103 ntBASIC-0.05□□□□□ -2.42
COL2A1P02458 RNU6-419P-201ENST00000517030 63 ntBASIC-0.05□□□□□ -2.42
COL2A1P02458 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.06□□□□□ -2.42
COL2A1P02458 AC093726.3-201ENST00000637588 150 ntBASIC-0.06□□□□□ -2.42
COL2A1P02458 MIR601-201ENST00000385256 79 ntBASIC-0.07□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 593.9 ms