Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 RNU6-675P-201ENST00000384236 104 ntBASIC-1.21□□□□□ -2.6
RTN3O95197 MIR630-201ENST00000384957 97 ntBASIC-1.21□□□□□ -2.6
RTN3O95197 RNU6-919P-201ENST00000516731 104 ntBASIC-1.21□□□□□ -2.6
RTN3O95197 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.22□□□□□ -2.6
RTN3O95197 RNU6-215P-201ENST00000365169 102 ntBASIC-1.22□□□□□ -2.6
RTN3O95197 RNU6-147P-201ENST00000383983 107 ntBASIC-1.22□□□□□ -2.6
RTN3O95197 RNU6-696P-201ENST00000390834 107 ntBASIC-1.22□□□□□ -2.6
RTN3O95197 RNU6-630P-201ENST00000391258 106 ntBASIC-1.22□□□□□ -2.6
RTN3O95197 RNU6-698P-201ENST00000363523 107 ntBASIC-1.23□□□□□ -2.61
RTN3O95197 RNU6-34P-201ENST00000364874 107 ntBASIC-1.23□□□□□ -2.61
RTN3O95197 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.23□□□□□ -2.61
RTN3O95197 RNU6-608P-201ENST00000383927 104 ntBASIC-1.23□□□□□ -2.61
RTN3O95197 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.23□□□□□ -2.61
RTN3O95197 RNU6-844P-201ENST00000517175 102 ntBASIC-1.23□□□□□ -2.61
RTN3O95197 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.23□□□□□ -2.61
RTN3O95197 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.24□□□□□ -2.61
RTN3O95197 SNORD45A-201ENST00000384512 84 ntBASIC-1.24□□□□□ -2.61
RTN3O95197 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.24□□□□□ -2.61
RTN3O95197 RNU6-168P-201ENST00000516189 101 ntBASIC-1.24□□□□□ -2.61
RTN3O95197 RNU6-406P-201ENST00000516470 107 ntBASIC-1.24□□□□□ -2.61
RTN3O95197 RNU6-706P-201ENST00000517229 104 ntBASIC-1.24□□□□□ -2.61
RTN3O95197 SNORD113.1-201ENST00000363280 73 ntBASIC-1.25□□□□□ -2.61
RTN3O95197 SNORD20-201ENST00000384550 80 ntBASIC-1.25□□□□□ -2.61
RTN3O95197 SNORD113-2-201ENST00000391082 72 ntBASIC-1.25□□□□□ -2.61
RTN3O95197 MIR4520-1-201ENST00000582609 70 ntBASIC-1.25□□□□□ -2.61
RTN3O95197 MIR1246-201ENST00000636535 73 ntBASIC-1.25□□□□□ -2.61
RTN3O95197 RNU6-49P-201ENST00000384256 107 ntBASIC-1.26□□□□□ -2.61
RTN3O95197 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.26□□□□□ -2.61
RTN3O95197 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.26□□□□□ -2.61
RTN3O95197 MIR6502-201ENST00000617296 76 ntBASIC-1.26□□□□□ -2.61
RTN3O95197 SNORA41B-201ENST00000384785 128 ntBASIC-1.27□□□□□ -2.61
RTN3O95197 RNU6-1131P-201ENST00000364955 107 ntBASIC-1.28□□□□□ -2.61
RTN3O95197 MIR548AI-201ENST00000579940 88 ntBASIC-1.28□□□□□ -2.61
RTN3O95197 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.29□□□□□ -2.62
RTN3O95197 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.29□□□□□ -2.62
RTN3O95197 RNU6-668P-201ENST00000364180 107 ntBASIC-1.3□□□□□ -2.62
RTN3O95197 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.3□□□□□ -2.62
RTN3O95197 RNU6-258P-201ENST00000390884 101 ntBASIC-1.3□□□□□ -2.62
RTN3O95197 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.3□□□□□ -2.62
RTN3O95197 MIR1297-201ENST00000637311 77 ntBASIC-1.3□□□□□ -2.62
RTN3O95197 MTND4LP1-201ENST00000446263 157 ntBASIC-1.31□□□□□ -2.62
RTN3O95197 MIR5588-201ENST00000581890 63 ntBASIC-1.31□□□□□ -2.62
RTN3O95197 MIR3170-201ENST00000582699 77 ntBASIC-1.31□□□□□ -2.62
RTN3O95197 RNU6-979P-201ENST00000383896 107 ntBASIC-1.32□□□□□ -2.62
RTN3O95197 AC018880.2-201ENST00000414265 201 ntBASIC-1.32□□□□□ -2.62
RTN3O95197 MIR5591-201ENST00000578248 65 ntBASIC-1.32□□□□□ -2.62
RTN3O95197 AC138207.3-201ENST00000585289 166 ntBASIC-1.32□□□□□ -2.62
RTN3O95197 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.32□□□□□ -2.62
RTN3O95197 SNORD1B-201ENST00000363091 84 ntBASIC-1.33□□□□□ -2.62
RTN3O95197 RNA5SP215-201ENST00000363440 122 ntBASIC-1.33□□□□□ -2.62
RTN3O95197 SNORD116-16-201ENST00000384533 92 ntBASIC-1.33□□□□□ -2.62
RTN3O95197 SNORD116-24-201ENST00000384549 92 ntBASIC-1.33□□□□□ -2.62
RTN3O95197 HLA-S-202ENST00000425174 53 ntBASIC-1.33□□□□□ -2.62
RTN3O95197 MIR8053-201ENST00000613344 75 ntBASIC-1.33□□□□□ -2.62
RTN3O95197 RNU6-79P-201ENST00000362511 107 ntBASIC-1.34□□□□□ -2.62
RTN3O95197 RNY1P1-201ENST00000364372 112 ntBASIC-1.34□□□□□ -2.62
RTN3O95197 RNU6-44P-201ENST00000384045 107 ntBASIC-1.34□□□□□ -2.62
RTN3O95197 MIR429-201ENST00000362106 83 ntBASIC-1.35□□□□□ -2.63
RTN3O95197 RNU6-315P-201ENST00000362666 107 ntBASIC-1.35□□□□□ -2.63
RTN3O95197 RNU6-563P-201ENST00000364872 108 ntBASIC-1.35□□□□□ -2.63
RTN3O95197 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.35□□□□□ -2.63
RTN3O95197 RNA5SP89-201ENST00000410300 108 ntBASIC-1.35□□□□□ -2.63
RTN3O95197 IGLL4P-201ENST00000614590 133 ntBASIC-1.35□□□□□ -2.63
RTN3O95197 SNORD115-31-201ENST00000365318 82 ntBASIC-1.36□□□□□ -2.63
RTN3O95197 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.37□□□□□ -2.63
RTN3O95197 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.37□□□□□ -2.63
RTN3O95197 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.37□□□□□ -2.63
RTN3O95197 MIR579-201ENST00000385221 98 ntBASIC-1.37□□□□□ -2.63
RTN3O95197 MIR4712-201ENST00000583750 82 ntBASIC-1.37□□□□□ -2.63
RTN3O95197 RNU6-226P-201ENST00000363778 107 ntBASIC-1.38□□□□□ -2.63
RTN3O95197 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.38□□□□□ -2.63
RTN3O95197 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.38□□□□□ -2.63
RTN3O95197 MIR548AA1-201ENST00000384971 97 ntBASIC-1.38□□□□□ -2.63
RTN3O95197 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.38□□□□□ -2.63
RTN3O95197 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.39□□□□□ -2.63
RTN3O95197 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.39□□□□□ -2.63
RTN3O95197 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.39□□□□□ -2.63
RTN3O95197 RNU6-70P-201ENST00000516438 60 ntBASIC-1.39□□□□□ -2.63
RTN3O95197 RNU7-151P-201ENST00000516930 53 ntBASIC-1.39□□□□□ -2.63
RTN3O95197 AC120024.2-201ENST00000576526 175 ntBASIC-1.39□□□□□ -2.63
RTN3O95197 MIR3134-201ENST00000579433 74 ntBASIC-1.39□□□□□ -2.63
RTN3O95197 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.39□□□□□ -2.63
RTN3O95197 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.4□□□□□ -2.63
RTN3O95197 RNA5SP86-201ENST00000390869 98 ntBASIC-1.4□□□□□ -2.63
RTN3O95197 RNU6-380P-201ENST00000410207 107 ntBASIC-1.4□□□□□ -2.63
RTN3O95197 RNU7-171P-201ENST00000459581 62 ntBASIC-1.4□□□□□ -2.63
RTN3O95197 MIR4770-201ENST00000579149 58 ntBASIC-1.4□□□□□ -2.63
RTN3O95197 MIR494-201ENST00000349529 81 ntBASIC-1.41□□□□□ -2.64
RTN3O95197 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.41□□□□□ -2.64
RTN3O95197 MIR487B-201ENST00000385021 84 ntBASIC-1.41□□□□□ -2.64
RTN3O95197 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.41□□□□□ -2.64
RTN3O95197 MIR1245B-201ENST00000636115 69 ntBASIC-1.41□□□□□ -2.64
RTN3O95197 RNU6-119P-201ENST00000364882 107 ntBASIC-1.42□□□□□ -2.64
RTN3O95197 RNU6-974P-201ENST00000384099 108 ntBASIC-1.42□□□□□ -2.64
RTN3O95197 RNU6-400P-201ENST00000391173 106 ntBASIC-1.42□□□□□ -2.64
RTN3O95197 RNY4P30-201ENST00000410216 95 ntBASIC-1.42□□□□□ -2.64
RTN3O95197 RNU6-172P-201ENST00000411000 93 ntBASIC-1.42□□□□□ -2.64
RTN3O95197 MIR7978-201ENST00000636158 59 ntBASIC-1.42□□□□□ -2.64
RTN3O95197 RNU6-247P-201ENST00000362636 107 ntBASIC-1.43□□□□□ -2.64
RTN3O95197 MIR154-201ENST00000385243 84 ntBASIC-1.43□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 338.7 ms