Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 RNU6-162P-201ENST00000516228 103 ntBASIC-3.61□□□□□ -2.99
HMGB3O15347 RNU6-426P-201ENST00000516464 97 ntBASIC-3.61□□□□□ -2.99
HMGB3O15347 Y_RNA.712-201ENST00000517011 92 ntBASIC-3.61□□□□□ -2.99
HMGB3O15347 RNU6-1107P-201ENST00000364817 104 ntBASIC-3.62□□□□□ -2.99
HMGB3O15347 AC074348.1-201ENST00000426503 132 ntBASIC-3.62□□□□□ -2.99
HMGB3O15347 RNU6-1211P-201ENST00000459179 105 ntBASIC-3.62□□□□□ -2.99
HMGB3O15347 RNU6-694P-201ENST00000364071 147 ntBASIC-3.63□□□□□ -2.99
HMGB3O15347 Y_RNA.398-201ENST00000383952 99 ntBASIC-3.63□□□□□ -2.99
HMGB3O15347 RNU6-804P-201ENST00000384286 107 ntBASIC-3.63□□□□□ -2.99
HMGB3O15347 RNU6-523P-201ENST00000516304 54 ntBASIC-3.63□□□□□ -2.99
HMGB3O15347 U6.95-201ENST00000636931 70 ntBASIC-3.63□□□□□ -2.99
HMGB3O15347 RNY1P1-201ENST00000364372 112 ntBASIC-3.64□□□□□ -2.99
HMGB3O15347 RNA5SP173-201ENST00000364857 136 ntBASIC-3.64□□□□□ -2.99
HMGB3O15347 RNY4P18-201ENST00000391107 89 ntBASIC-3.64□□□□□ -2.99
HMGB3O15347 MTCYBP9-201ENST00000431021 303 ntBASIC-3.64□□□□□ -2.99
HMGB3O15347 RNU6-557P-201ENST00000516842 110 ntBASIC-3.64□□□□□ -2.99
HMGB3O15347 RNU6-633P-201ENST00000362612 103 ntBASIC-3.65□□□□□ -2.99
HMGB3O15347 Y_RNA.291-201ENST00000364886 113 ntBASIC-3.65□□□□□ -2.99
HMGB3O15347 MIR1302-3-201ENST00000408128 138 ntBASIC-3.65□□□□□ -2.99
HMGB3O15347 MIR7978-201ENST00000636158 59 ntBASIC-3.65□□□□□ -2.99
HMGB3O15347 Y_RNA.107-201ENST00000363190 121 ntBASIC-3.66□□□□□ -3
HMGB3O15347 Y_RNA.307-201ENST00000365022 117 ntBASIC-3.66□□□□□ -3
HMGB3O15347 MIR581-201ENST00000384895 96 ntBASIC-3.66□□□□□ -3
HMGB3O15347 MIR5693-201ENST00000577722 73 ntBASIC-3.66□□□□□ -3
HMGB3O15347 AC008737.2-201ENST00000599446 118 ntBASIC-3.66□□□□□ -3
HMGB3O15347 Y_RNA.321-201ENST00000365149 102 ntBASIC-3.67□□□□□ -3
HMGB3O15347 MIR590-201ENST00000385008 97 ntBASIC-3.67□□□□□ -3
HMGB3O15347 MIR125B1-201ENST00000385236 88 ntBASIC-3.67□□□□□ -3
HMGB3O15347 SNORA40-201ENST00000388090 126 ntBASIC-3.67□□□□□ -3
HMGB3O15347 Y_RNA.93-201ENST00000363066 109 ntBASIC-3.68□□□□□ -3
HMGB3O15347 RNU6-668P-201ENST00000364180 107 ntBASIC-3.68□□□□□ -3
HMGB3O15347 MIR568-201ENST00000385036 95 ntBASIC-3.68□□□□□ -3
HMGB3O15347 MIR579-201ENST00000385221 98 ntBASIC-3.68□□□□□ -3
HMGB3O15347 AC093729.1-201ENST00000513074 128 ntBASIC-3.68□□□□□ -3
HMGB3O15347 RNU6-129P-201ENST00000391022 107 ntBASIC-3.69□□□□□ -3
HMGB3O15347 Y_RNA.61-201ENST00000362835 102 ntBASIC-3.7□□□□□ -3
HMGB3O15347 SNORD60-201ENST00000383903 83 ntBASIC-3.71□□□□□ -3
HMGB3O15347 MIRLET7A2-201ENST00000362105 72 ntBASIC-3.73□□□□□ -3.01
HMGB3O15347 RNU6-686P-201ENST00000364839 107 ntBASIC-3.73□□□□□ -3.01
HMGB3O15347 RNU6-172P-201ENST00000411000 93 ntBASIC-3.73□□□□□ -3.01
HMGB3O15347 Y_RNA.629-201ENST00000411368 105 ntBASIC-3.73□□□□□ -3.01
HMGB3O15347 RNU6-974P-201ENST00000384099 108 ntBASIC-3.74□□□□□ -3.01
HMGB3O15347 MIR548N-201ENST00000408742 75 ntBASIC-3.74□□□□□ -3.01
HMGB3O15347 Y_RNA.830-201ENST00000628531 96 ntBASIC-3.74□□□□□ -3.01
HMGB3O15347 SNORD113-3-201ENST00000364830 72 ntBASIC-3.75□□□□□ -3.01
HMGB3O15347 MIR606-201ENST00000384851 96 ntBASIC-3.75□□□□□ -3.01
HMGB3O15347 MIR1302-5-201ENST00000408164 150 ntBASIC-3.75□□□□□ -3.01
HMGB3O15347 Y_RNA.818-201ENST00000618813 71 ntBASIC-3.75□□□□□ -3.01
HMGB3O15347 RNU6-200P-201ENST00000364743 107 ntBASIC-3.76□□□□□ -3.01
HMGB3O15347 RNU6-257P-201ENST00000410238 98 ntBASIC-3.76□□□□□ -3.01
HMGB3O15347 RNU6-659P-201ENST00000516454 104 ntBASIC-3.76□□□□□ -3.01
HMGB3O15347 MIR8053-201ENST00000613344 75 ntBASIC-3.76□□□□□ -3.01
HMGB3O15347 SNORD113.1-201ENST00000363280 73 ntBASIC-3.77□□□□□ -3.01
HMGB3O15347 RNU6-520P-201ENST00000384717 104 ntBASIC-3.77□□□□□ -3.01
HMGB3O15347 RNY4P25-201ENST00000459254 96 ntBASIC-3.77□□□□□ -3.01
HMGB3O15347 AC004792.1-201ENST00000614523 137 ntBASIC-3.77□□□□□ -3.01
HMGB3O15347 MIR202-201ENST00000362219 110 ntBASIC-3.78□□□□□ -3.01
HMGB3O15347 Y_RNA.134-201ENST00000363435 105 ntBASIC-3.78□□□□□ -3.01
HMGB3O15347 Y_RNA.511-201ENST00000384514 103 ntBASIC-3.78□□□□□ -3.01
HMGB3O15347 Y_RNA.532-201ENST00000384590 113 ntBASIC-3.78□□□□□ -3.01
HMGB3O15347 MTND5P41-201ENST00000517498 206 ntBASIC-3.78□□□□□ -3.01
HMGB3O15347 MIR4668-201ENST00000582284 70 ntBASIC-3.78□□□□□ -3.01
HMGB3O15347 MIRLET7A1-201ENST00000362295 80 ntBASIC-3.79□□□□□ -3.02
HMGB3O15347 Y_RNA.139-201ENST00000363464 102 ntBASIC-3.79□□□□□ -3.02
HMGB3O15347 RNU6-1324P-201ENST00000384222 107 ntBASIC-3.79□□□□□ -3.02
HMGB3O15347 RNU6-649P-201ENST00000384463 107 ntBASIC-3.79□□□□□ -3.02
HMGB3O15347 SNORD116-21-201ENST00000384507 92 ntBASIC-3.79□□□□□ -3.02
HMGB3O15347 RNU6-402P-201ENST00000410678 103 ntBASIC-3.79□□□□□ -3.02
HMGB3O15347 RNU6-109P-201ENST00000516364 107 ntBASIC-3.79□□□□□ -3.02
HMGB3O15347 RNU6-184P-201ENST00000516514 107 ntBASIC-3.79□□□□□ -3.02
HMGB3O15347 Y_RNA.79-201ENST00000362992 113 ntBASIC-3.8□□□□□ -3.02
HMGB3O15347 MIR1297-201ENST00000637311 77 ntBASIC-3.8□□□□□ -3.02
HMGB3O15347 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-3.8□□□□□ -3.02
HMGB3O15347 RNU6-1325P-201ENST00000364905 105 ntBASIC-3.81□□□□□ -3.02
HMGB3O15347 MIR4801-201ENST00000582704 82 ntBASIC-3.81□□□□□ -3.02
HMGB3O15347 Y_RNA.290-201ENST00000364879 114 ntBASIC-3.82□□□□□ -3.02
HMGB3O15347 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-3.82□□□□□ -3.02
HMGB3O15347 RNU6-971P-201ENST00000516920 106 ntBASIC-3.82□□□□□ -3.02
HMGB3O15347 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-3.83□□□□□ -3.02
HMGB3O15347 Y_RNA.193-201ENST00000363979 102 ntBASIC-3.84□□□□□ -3.02
HMGB3O15347 RNU6-106P-201ENST00000384405 107 ntBASIC-3.84□□□□□ -3.02
HMGB3O15347 RNU6-738P-201ENST00000384531 106 ntBASIC-3.84□□□□□ -3.02
HMGB3O15347 MIR509-1-201ENST00000385265 94 ntBASIC-3.84□□□□□ -3.02
HMGB3O15347 MIR509-2-201ENST00000390724 91 ntBASIC-3.84□□□□□ -3.02
HMGB3O15347 RNU7-160P-201ENST00000516660 62 ntBASIC-3.84□□□□□ -3.02
HMGB3O15347 Y_RNA.489-201ENST00000384410 101 ntBASIC-3.85□□□□□ -3.03
HMGB3O15347 Y_RNA.620-201ENST00000411009 88 ntBASIC-3.85□□□□□ -3.03
HMGB3O15347 RNU6-755P-201ENST00000364400 103 ntBASIC-3.86□□□□□ -3.03
HMGB3O15347 SNORA17.4-201ENST00000391287 132 ntBASIC-3.86□□□□□ -3.03
HMGB3O15347 RNU6-834P-201ENST00000362367 110 ntBASIC-3.87□□□□□ -3.03
HMGB3O15347 RNU6-1277P-201ENST00000364561 107 ntBASIC-3.87□□□□□ -3.03
HMGB3O15347 Y_RNA.343-201ENST00000365354 112 ntBASIC-3.87□□□□□ -3.03
HMGB3O15347 RNU6-987P-201ENST00000384759 104 ntBASIC-3.87□□□□□ -3.03
HMGB3O15347 SNORA63.4-201ENST00000362763 126 ntBASIC-3.89□□□□□ -3.03
HMGB3O15347 RNU6-497P-201ENST00000365316 104 ntBASIC-3.89□□□□□ -3.03
HMGB3O15347 AL353621.2-201ENST00000605340 133 ntBASIC-3.89□□□□□ -3.03
HMGB3O15347 Y_RNA.219-201ENST00000364232 113 ntBASIC-3.9□□□□□ -3.03
HMGB3O15347 SNORD45A-201ENST00000384512 84 ntBASIC-3.9□□□□□ -3.03
HMGB3O15347 SNORA19-201ENST00000384737 128 ntBASIC-3.9□□□□□ -3.03
HMGB3O15347 MIR4484-201ENST00000582855 83 ntBASIC-3.9□□□□□ -3.03
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms