Protein–RNA interactions for Protein: Q9Y546

LRRC42, Leucine-rich repeat-containing protein 42, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42Q9Y546 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.64□□□□□ -2.67
LRRC42Q9Y546 RNA5SP86-201ENST00000390869 98 ntBASIC-1.64□□□□□ -2.67
LRRC42Q9Y546 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.64□□□□□ -2.67
LRRC42Q9Y546 RNU6-158P-201ENST00000517104 100 ntBASIC-1.64□□□□□ -2.67
LRRC42Q9Y546 MIR4668-201ENST00000582284 70 ntBASIC-1.64□□□□□ -2.67
LRRC42Q9Y546 RNU6-704P-201ENST00000364162 103 ntBASIC-1.65□□□□□ -2.67
LRRC42Q9Y546 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.65□□□□□ -2.67
LRRC42Q9Y546 Y_RNA.703-201ENST00000516846 111 ntBASIC-1.65□□□□□ -2.67
LRRC42Q9Y546 RNU6-794P-201ENST00000517261 64 ntBASIC-1.65□□□□□ -2.67
LRRC42Q9Y546 MIR3675-201ENST00000583661 73 ntBASIC-1.65□□□□□ -2.67
LRRC42Q9Y546 RNU6-400P-201ENST00000391173 106 ntBASIC-1.66□□□□□ -2.68
LRRC42Q9Y546 MIR3133-201ENST00000583157 78 ntBASIC-1.66□□□□□ -2.68
LRRC42Q9Y546 U2.18-201ENST00000622185 84 ntBASIC-1.66□□□□□ -2.68
LRRC42Q9Y546 RNU6-497P-201ENST00000365316 104 ntBASIC-1.67□□□□□ -2.68
LRRC42Q9Y546 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.67□□□□□ -2.68
LRRC42Q9Y546 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.67□□□□□ -2.68
LRRC42Q9Y546 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.67□□□□□ -2.68
LRRC42Q9Y546 RNU6-303P-201ENST00000517091 106 ntBASIC-1.67□□□□□ -2.68
LRRC42Q9Y546 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.68□□□□□ -2.68
LRRC42Q9Y546 AC074348.1-201ENST00000426503 132 ntBASIC-1.68□□□□□ -2.68
LRRC42Q9Y546 AC008267.6-201ENST00000441664 139 ntBASIC-1.68□□□□□ -2.68
LRRC42Q9Y546 RNU6-698P-201ENST00000363523 107 ntBASIC-1.69□□□□□ -2.68
LRRC42Q9Y546 RNU6-219P-201ENST00000364728 107 ntBASIC-1.69□□□□□ -2.68
LRRC42Q9Y546 RNU6-34P-201ENST00000364874 107 ntBASIC-1.69□□□□□ -2.68
LRRC42Q9Y546 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.69□□□□□ -2.68
LRRC42Q9Y546 RNU6-959P-201ENST00000384671 107 ntBASIC-1.69□□□□□ -2.68
LRRC42Q9Y546 AC093729.1-201ENST00000513074 128 ntBASIC-1.69□□□□□ -2.68
LRRC42Q9Y546 RNU6-557P-201ENST00000516842 110 ntBASIC-1.69□□□□□ -2.68
LRRC42Q9Y546 RNU6-589P-201ENST00000516485 107 ntBASIC-1.7□□□□□ -2.68
LRRC42Q9Y546 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.71□□□□□ -2.68
LRRC42Q9Y546 MIR548V-201ENST00000584165 80 ntBASIC-1.71□□□□□ -2.68
LRRC42Q9Y546 SNORD45.1-201ENST00000363181 77 ntBASIC-1.72□□□□□ -2.68
LRRC42Q9Y546 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.72□□□□□ -2.68
LRRC42Q9Y546 MIR487B-201ENST00000385021 84 ntBASIC-1.72□□□□□ -2.68
LRRC42Q9Y546 MIR548H1-201ENST00000408610 102 ntBASIC-1.72□□□□□ -2.68
LRRC42Q9Y546 RNU6-267P-201ENST00000516714 103 ntBASIC-1.72□□□□□ -2.68
LRRC42Q9Y546 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.72□□□□□ -2.68
LRRC42Q9Y546 MIR429-201ENST00000362106 83 ntBASIC-1.73□□□□□ -2.69
LRRC42Q9Y546 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.73□□□□□ -2.69
LRRC42Q9Y546 AL365222.1-201ENST00000614661 98 ntBASIC-1.73□□□□□ -2.69
LRRC42Q9Y546 MIR2052-201ENST00000636055 55 ntBASIC-1.73□□□□□ -2.69
LRRC42Q9Y546 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.74□□□□□ -2.69
LRRC42Q9Y546 RNU6-686P-201ENST00000364839 107 ntBASIC-1.74□□□□□ -2.69
LRRC42Q9Y546 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.74□□□□□ -2.69
LRRC42Q9Y546 RNU6-402P-201ENST00000410678 103 ntBASIC-1.74□□□□□ -2.69
LRRC42Q9Y546 MIR3170-201ENST00000582699 77 ntBASIC-1.74□□□□□ -2.69
LRRC42Q9Y546 MIR548BB-201ENST00000626714 66 ntBASIC-1.74□□□□□ -2.69
LRRC42Q9Y546 RNU6-563P-201ENST00000364872 108 ntBASIC-1.75□□□□□ -2.69
LRRC42Q9Y546 RNU6-209P-201ENST00000384118 107 ntBASIC-1.75□□□□□ -2.69
LRRC42Q9Y546 MIR630-201ENST00000384957 97 ntBASIC-1.75□□□□□ -2.69
LRRC42Q9Y546 snosnR66.1-201ENST00000391095 99 ntBASIC-1.75□□□□□ -2.69
LRRC42Q9Y546 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.75□□□□□ -2.69
LRRC42Q9Y546 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.75□□□□□ -2.69
LRRC42Q9Y546 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.76□□□□□ -2.69
LRRC42Q9Y546 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.76□□□□□ -2.69
LRRC42Q9Y546 RNU6-258P-201ENST00000390884 101 ntBASIC-1.76□□□□□ -2.69
LRRC42Q9Y546 MIR4484-201ENST00000582855 83 ntBASIC-1.76□□□□□ -2.69
LRRC42Q9Y546 RNU6-834P-201ENST00000362367 110 ntBASIC-1.77□□□□□ -2.69
LRRC42Q9Y546 RNU6-1056P-201ENST00000383996 107 ntBASIC-1.77□□□□□ -2.69
LRRC42Q9Y546 SNORD116-22-201ENST00000384430 92 ntBASIC-1.77□□□□□ -2.69
LRRC42Q9Y546 SNORD113-2-201ENST00000391082 72 ntBASIC-1.77□□□□□ -2.69
LRRC42Q9Y546 MIR4320-201ENST00000636981 65 ntBASIC-1.77□□□□□ -2.69
LRRC42Q9Y546 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.78□□□□□ -2.69
LRRC42Q9Y546 SNORD116-16-201ENST00000384533 92 ntBASIC-1.78□□□□□ -2.69
LRRC42Q9Y546 AC120024.2-201ENST00000576526 175 ntBASIC-1.78□□□□□ -2.69
LRRC42Q9Y546 MALAT1.1-201ENST00000618249 95 ntBASIC-1.78□□□□□ -2.69
LRRC42Q9Y546 MIR409-201ENST00000362237 79 ntBASIC-1.79□□□□□ -2.7
LRRC42Q9Y546 MIR450A1-201ENST00000362262 91 ntBASIC-1.79□□□□□ -2.7
LRRC42Q9Y546 SNORD1B-201ENST00000363091 84 ntBASIC-1.79□□□□□ -2.7
LRRC42Q9Y546 RNU6-81P-201ENST00000365608 104 ntBASIC-1.79□□□□□ -2.7
LRRC42Q9Y546 SNORA41B-201ENST00000384785 128 ntBASIC-1.79□□□□□ -2.7
LRRC42Q9Y546 RNU6-695P-201ENST00000391157 104 ntBASIC-1.79□□□□□ -2.7
LRRC42Q9Y546 RNU6-129P-201ENST00000391022 107 ntBASIC-1.8□□□□□ -2.7
LRRC42Q9Y546 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.8□□□□□ -2.7
LRRC42Q9Y546 AL031737.1-201ENST00000450125 223 ntBASIC-1.8□□□□□ -2.7
LRRC42Q9Y546 RNA5SP476-201ENST00000516613 103 ntBASIC-1.8□□□□□ -2.7
LRRC42Q9Y546 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.8□□□□□ -2.7
LRRC42Q9Y546 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.81□□□□□ -2.7
LRRC42Q9Y546 RNA5SP461-201ENST00000516451 104 ntBASIC-1.81□□□□□ -2.7
LRRC42Q9Y546 MIR23C-201ENST00000579846 100 ntBASIC-1.81□□□□□ -2.7
LRRC42Q9Y546 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.81□□□□□ -2.7
LRRC42Q9Y546 SNORD113.1-201ENST00000363280 73 ntBASIC-1.82□□□□□ -2.7
LRRC42Q9Y546 MIR548AA1-201ENST00000384971 97 ntBASIC-1.82□□□□□ -2.7
LRRC42Q9Y546 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.82□□□□□ -2.7
LRRC42Q9Y546 MTND4LP1-201ENST00000446263 157 ntBASIC-1.82□□□□□ -2.7
LRRC42Q9Y546 RNA5SP215-201ENST00000363440 122 ntBASIC-1.83□□□□□ -2.7
LRRC42Q9Y546 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.83□□□□□ -2.7
LRRC42Q9Y546 SNORD45A-201ENST00000384512 84 ntBASIC-1.83□□□□□ -2.7
LRRC42Q9Y546 AP001318.4-201ENST00000616637 121 ntBASIC-1.83□□□□□ -2.7
LRRC42Q9Y546 MIR664A-201ENST00000626086 82 ntBASIC-1.83□□□□□ -2.7
LRRC42Q9Y546 SNORD18.1-201ENST00000363807 70 ntBASIC-1.84□□□□□ -2.7
LRRC42Q9Y546 RNU6-668P-201ENST00000364180 107 ntBASIC-1.84□□□□□ -2.7
LRRC42Q9Y546 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.84□□□□□ -2.7
LRRC42Q9Y546 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.84□□□□□ -2.7
LRRC42Q9Y546 RNU6-540P-201ENST00000384622 101 ntBASIC-1.84□□□□□ -2.7
LRRC42Q9Y546 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.84□□□□□ -2.7
LRRC42Q9Y546 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.84□□□□□ -2.7
LRRC42Q9Y546 MIR3123-201ENST00000583417 75 ntBASIC-1.84□□□□□ -2.7
LRRC42Q9Y546 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.84□□□□□ -2.7
LRRC42Q9Y546 MIR488-201ENST00000365739 83 ntBASIC-1.85□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 229.1 ms