Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 SNORD71-201ENST00000411292 86 ntBASIC1.3□□□□□ -2.2
LHX6Q9UPM6 AL590095.2-201ENST00000604136 117 ntBASIC1.3□□□□□ -2.2
LHX6Q9UPM6 AL445584.3-201ENST00000617173 78 ntBASIC1.3□□□□□ -2.2
LHX6Q9UPM6 MIR6755-201ENST00000619993 66 ntBASIC1.3□□□□□ -2.2
LHX6Q9UPM6 AC104408.1-201ENST00000605241 170 ntBASIC1.29□□□□□ -2.2
LHX6Q9UPM6 MIR760-201ENST00000390220 80 ntBASIC1.28□□□□□ -2.2
LHX6Q9UPM6 RNU6-894P-201ENST00000517094 105 ntBASIC1.28□□□□□ -2.2
LHX6Q9UPM6 MIR3925-201ENST00000584674 77 ntBASIC1.28□□□□□ -2.2
LHX6Q9UPM6 MIR7974-201ENST00000615835 79 ntBASIC1.28□□□□□ -2.2
LHX6Q9UPM6 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.28□□□□□ -2.21
LHX6Q9UPM6 MIR518A1-201ENST00000385068 85 ntBASIC1.27□□□□□ -2.21
LHX6Q9UPM6 RNU6-1111P-201ENST00000391118 107 ntBASIC1.26□□□□□ -2.21
LHX6Q9UPM6 AC138207.3-201ENST00000585289 166 ntBASIC1.26□□□□□ -2.21
LHX6Q9UPM6 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
LHX6Q9UPM6 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.25□□□□□ -2.21
LHX6Q9UPM6 RNA5SP257-201ENST00000363023 116 ntBASIC1.25□□□□□ -2.21
LHX6Q9UPM6 RNA5SP128-201ENST00000365305 116 ntBASIC1.25□□□□□ -2.21
LHX6Q9UPM6 Y_RNA.613-201ENST00000410726 97 ntBASIC1.25□□□□□ -2.21
LHX6Q9UPM6 RNU6-1326P-201ENST00000391262 107 ntBASIC1.24□□□□□ -2.21
LHX6Q9UPM6 RNU4-54P-201ENST00000516428 129 ntBASIC1.24□□□□□ -2.21
LHX6Q9UPM6 MIR1468-201ENST00000410600 86 ntBASIC1.23□□□□□ -2.21
LHX6Q9UPM6 MIR4661-201ENST00000582720 75 ntBASIC1.23□□□□□ -2.21
LHX6Q9UPM6 AL391099.1-201ENST00000624635 187 ntBASIC1.23□□□□□ -2.21
LHX6Q9UPM6 MIR4317-201ENST00000637586 65 ntBASIC1.23□□□□□ -2.21
LHX6Q9UPM6 RNA5SP98-201ENST00000363158 137 ntBASIC1.22□□□□□ -2.21
LHX6Q9UPM6 MIR150-201ENST00000385048 84 ntBASIC1.22□□□□□ -2.21
LHX6Q9UPM6 MIR3660-201ENST00000584845 100 ntBASIC1.22□□□□□ -2.21
LHX6Q9UPM6 MIR924-201ENST00000638017 53 ntBASIC1.22□□□□□ -2.21
LHX6Q9UPM6 RNU6-1133P-201ENST00000410963 100 ntBASIC1.21□□□□□ -2.22
LHX6Q9UPM6 RNA5SP330-201ENST00000517096 96 ntBASIC1.21□□□□□ -2.22
LHX6Q9UPM6 AC087343.1-201ENST00000477341 475 ntBASIC1.2□□□□□ -2.22
LHX6Q9UPM6 RNA5SP121-201ENST00000516537 101 ntBASIC1.2□□□□□ -2.22
LHX6Q9UPM6 Y_RNA.345-201ENST00000365384 92 ntBASIC1.19□□□□□ -2.22
LHX6Q9UPM6 SCARNA11.2-201ENST00000517183 154 ntBASIC1.19□□□□□ -2.22
LHX6Q9UPM6 RNU6-1238P-201ENST00000517215 102 ntBASIC1.19□□□□□ -2.22
LHX6Q9UPM6 AC068338.1-201ENST00000565567 176 ntBASIC1.19□□□□□ -2.22
LHX6Q9UPM6 MIR4295-201ENST00000585286 85 ntBASIC1.19□□□□□ -2.22
LHX6Q9UPM6 MIR499B-201ENST00000636498 73 ntBASIC1.19□□□□□ -2.22
LHX6Q9UPM6 RNU6-973P-201ENST00000364690 107 ntBASIC1.18□□□□□ -2.22
LHX6Q9UPM6 RNU7-55P-201ENST00000459426 62 ntBASIC1.18□□□□□ -2.22
LHX6Q9UPM6 MIR6507-201ENST00000613630 70 ntBASIC1.18□□□□□ -2.22
LHX6Q9UPM6 MIR608-201ENST00000384820 100 ntBASIC1.17□□□□□ -2.22
LHX6Q9UPM6 RNU6-863P-201ENST00000515989 104 ntBASIC1.16□□□□□ -2.22
LHX6Q9UPM6 RNU6-732P-201ENST00000516033 103 ntBASIC1.16□□□□□ -2.22
LHX6Q9UPM6 AC211469.2-201ENST00000605461 205 ntBASIC1.16□□□□□ -2.22
LHX6Q9UPM6 uc_338.36-201ENST00000622331 158 ntBASIC1.16□□□□□ -2.22
LHX6Q9UPM6 RNU6-1047P-201ENST00000364418 107 ntBASIC1.15□□□□□ -2.23
LHX6Q9UPM6 CYP3A137P-201ENST00000562436 69 ntBASIC1.15□□□□□ -2.23
LHX6Q9UPM6 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.14□□□□□ -2.23
LHX6Q9UPM6 Y_RNA.206-201ENST00000364136 102 ntBASIC1.14□□□□□ -2.23
LHX6Q9UPM6 MIR6086-201ENST00000638065 55 ntBASIC1.14□□□□□ -2.23
LHX6Q9UPM6 SNORA27.2-201ENST00000363365 126 ntBASIC1.13□□□□□ -2.23
LHX6Q9UPM6 AC096531.1-201ENST00000419107 107 ntBASIC1.13□□□□□ -2.23
LHX6Q9UPM6 RNU7-129P-201ENST00000516128 62 ntBASIC1.13□□□□□ -2.23
LHX6Q9UPM6 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
LHX6Q9UPM6 RNU6-258P-201ENST00000390884 101 ntBASIC1.12□□□□□ -2.23
LHX6Q9UPM6 Y_RNA.699-201ENST00000516803 93 ntBASIC1.12□□□□□ -2.23
LHX6Q9UPM6 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.12□□□□□ -2.23
LHX6Q9UPM6 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
LHX6Q9UPM6 SNORD114-23-201ENST00000363536 72 ntBASIC1.11□□□□□ -2.23
LHX6Q9UPM6 RNU6-900P-201ENST00000384498 102 ntBASIC1.11□□□□□ -2.23
LHX6Q9UPM6 RNU6-110P-201ENST00000384508 104 ntBASIC1.11□□□□□ -2.23
LHX6Q9UPM6 RNU6-939P-201ENST00000384634 107 ntBASIC1.11□□□□□ -2.23
LHX6Q9UPM6 MIR8087-201ENST00000612745 78 ntBASIC1.11□□□□□ -2.23
LHX6Q9UPM6 AC010487.4-201ENST00000637027 61 ntBASIC1.11□□□□□ -2.23
LHX6Q9UPM6 MIR4426-201ENST00000640330 63 ntBASIC1.11□□□□□ -2.23
LHX6Q9UPM6 AC108740.1-201ENST00000498629 225 ntBASIC1.1□□□□□ -2.23
LHX6Q9UPM6 MIR548Q-201ENST00000408404 100 ntBASIC1.09□□□□□ -2.23
LHX6Q9UPM6 MIR373-201ENST00000362273 69 ntBASIC1.08□□□□□ -2.24
LHX6Q9UPM6 AL627230.5-201ENST00000619807 58 ntBASIC1.08□□□□□ -2.24
LHX6Q9UPM6 uc_338.17-201ENST00000619633 179 ntBASIC1.07□□□□□ -2.24
LHX6Q9UPM6 RNU6-133P-201ENST00000383989 107 ntBASIC1.06□□□□□ -2.24
LHX6Q9UPM6 MIR520D-201ENST00000385002 87 ntBASIC1.06□□□□□ -2.24
LHX6Q9UPM6 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
LHX6Q9UPM6 RNU6-361P-201ENST00000364454 107 ntBASIC1.04□□□□□ -2.24
LHX6Q9UPM6 MIR6513-201ENST00000621188 64 ntBASIC1.04□□□□□ -2.24
LHX6Q9UPM6 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.03□□□□□ -2.24
LHX6Q9UPM6 SNORD19-201ENST00000391191 68 ntBASIC1.03□□□□□ -2.24
LHX6Q9UPM6 SNORA42.1-201ENST00000363515 137 ntBASIC1.02□□□□□ -2.25
LHX6Q9UPM6 MIR1285-1-201ENST00000408593 84 ntBASIC1.02□□□□□ -2.25
LHX6Q9UPM6 MIR4714-201ENST00000580728 77 ntBASIC1.02□□□□□ -2.25
LHX6Q9UPM6 SNORD44.1-201ENST00000363202 61 ntBASIC1.01□□□□□ -2.25
LHX6Q9UPM6 OR2A41P-201ENST00000473586 105 ntBASIC1.01□□□□□ -2.25
LHX6Q9UPM6 MIR5704-201ENST00000584029 77 ntBASIC1.01□□□□□ -2.25
LHX6Q9UPM6 MIR330-201ENST00000362196 94 ntBASIC1□□□□□ -2.25
LHX6Q9UPM6 RNU6-1233P-201ENST00000362922 102 ntBASIC1□□□□□ -2.25
LHX6Q9UPM6 MIR936-201ENST00000401264 98 ntBASIC1□□□□□ -2.25
LHX6Q9UPM6 MIR1197-201ENST00000408818 88 ntBASIC1□□□□□ -2.25
LHX6Q9UPM6 RNA5SP169-201ENST00000517268 117 ntBASIC1□□□□□ -2.25
LHX6Q9UPM6 RNY1P9-201ENST00000532431 109 ntBASIC1□□□□□ -2.25
LHX6Q9UPM6 MIR6854-201ENST00000614935 69 ntBASIC1□□□□□ -2.25
LHX6Q9UPM6 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
LHX6Q9UPM6 RNU6-455P-201ENST00000384681 107 ntBASIC0.99□□□□□ -2.25
LHX6Q9UPM6 MIR124-2-201ENST00000385081 109 ntBASIC0.99□□□□□ -2.25
LHX6Q9UPM6 RNU6-300P-201ENST00000459080 104 ntBASIC0.99□□□□□ -2.25
LHX6Q9UPM6 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.99□□□□□ -2.25
LHX6Q9UPM6 MIR3973-201ENST00000579824 107 ntBASIC0.99□□□□□ -2.25
LHX6Q9UPM6 MIR6857-201ENST00000613267 93 ntBASIC0.99□□□□□ -2.25
LHX6Q9UPM6 MIR8068-201ENST00000618032 68 ntBASIC0.99□□□□□ -2.25
LHX6Q9UPM6 SNORD111B-201ENST00000408587 80 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 219.9 ms