Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 AC093726.3-201ENST00000637588 150 ntBASIC-0.36□□□□□ -2.47
LIMA1Q9UHB6 SNORA32.3-201ENST00000384772 121 ntBASIC-0.37□□□□□ -2.47
LIMA1Q9UHB6 RNU4-63P-201ENST00000411313 118 ntBASIC-0.37□□□□□ -2.47
LIMA1Q9UHB6 MIR3681-201ENST00000580089 72 ntBASIC-0.37□□□□□ -2.47
LIMA1Q9UHB6 MIR4464-201ENST00000580818 92 ntBASIC-0.37□□□□□ -2.47
LIMA1Q9UHB6 MIR6854-201ENST00000614935 69 ntBASIC-0.37□□□□□ -2.47
LIMA1Q9UHB6 MIR548AZ-201ENST00000616567 95 ntBASIC-0.37□□□□□ -2.47
LIMA1Q9UHB6 snoR1.1-201ENST00000628177 80 ntBASIC-0.37□□□□□ -2.47
LIMA1Q9UHB6 MIR3202-2-201ENST00000635980 79 ntBASIC-0.37□□□□□ -2.47
LIMA1Q9UHB6 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.38□□□□□ -2.47
LIMA1Q9UHB6 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.38□□□□□ -2.47
LIMA1Q9UHB6 AL353803.5-201ENST00000599815 141 ntBASIC-0.38□□□□□ -2.47
LIMA1Q9UHB6 U2.7-201ENST00000619197 100 ntBASIC-0.38□□□□□ -2.47
LIMA1Q9UHB6 RNU6-1124P-201ENST00000384169 107 ntBASIC-0.39□□□□□ -2.47
LIMA1Q9UHB6 MIR519A2-201ENST00000384990 87 ntBASIC-0.39□□□□□ -2.47
LIMA1Q9UHB6 MIR3134-201ENST00000579433 74 ntBASIC-0.39□□□□□ -2.47
LIMA1Q9UHB6 SNORD95.1-201ENST00000364099 68 ntBASIC-0.4□□□□□ -2.47
LIMA1Q9UHB6 SNORD45A-201ENST00000384512 84 ntBASIC-0.4□□□□□ -2.47
LIMA1Q9UHB6 RNA5SP470-201ENST00000516463 106 ntBASIC-0.4□□□□□ -2.47
LIMA1Q9UHB6 SNORD14C-201ENST00000365382 88 ntBASIC-0.41□□□□□ -2.48
LIMA1Q9UHB6 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.41□□□□□ -2.48
LIMA1Q9UHB6 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.41□□□□□ -2.48
LIMA1Q9UHB6 MIR1255A-201ENST00000408338 113 ntBASIC-0.41□□□□□ -2.48
LIMA1Q9UHB6 SNORD57-201ENST00000448188 72 ntBASIC-0.41□□□□□ -2.48
LIMA1Q9UHB6 SNORD126-201ENST00000459475 77 ntBASIC-0.41□□□□□ -2.48
LIMA1Q9UHB6 RNU6-518P-201ENST00000516056 96 ntBASIC-0.41□□□□□ -2.48
LIMA1Q9UHB6 SNORD113.1-201ENST00000363280 73 ntBASIC-0.42□□□□□ -2.48
LIMA1Q9UHB6 RNU7-154P-201ENST00000516194 62 ntBASIC-0.42□□□□□ -2.48
LIMA1Q9UHB6 RNU6-70P-201ENST00000516438 60 ntBASIC-0.42□□□□□ -2.48
LIMA1Q9UHB6 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.42□□□□□ -2.48
LIMA1Q9UHB6 MIR6888-201ENST00000621977 67 ntBASIC-0.42□□□□□ -2.48
LIMA1Q9UHB6 RNU6-279P-201ENST00000391297 101 ntBASIC-0.43□□□□□ -2.48
LIMA1Q9UHB6 MIR548AG1-201ENST00000579932 66 ntBASIC-0.43□□□□□ -2.48
LIMA1Q9UHB6 MIR8053-201ENST00000613344 75 ntBASIC-0.43□□□□□ -2.48
LIMA1Q9UHB6 SNORA62.4-201ENST00000365504 151 ntBASIC-0.44□□□□□ -2.48
LIMA1Q9UHB6 MIR196A2-201ENST00000385189 110 ntBASIC-0.44□□□□□ -2.48
LIMA1Q9UHB6 AL021921.1-201ENST00000442774 93 ntBASIC-0.44□□□□□ -2.48
LIMA1Q9UHB6 RNU6-857P-201ENST00000515893 110 ntBASIC-0.44□□□□□ -2.48
LIMA1Q9UHB6 AL445584.3-201ENST00000617173 78 ntBASIC-0.44□□□□□ -2.48
LIMA1Q9UHB6 SNORD78.1-201ENST00000390866 65 ntBASIC-0.45□□□□□ -2.48
LIMA1Q9UHB6 RNU7-174P-201ENST00000516248 59 ntBASIC-0.45□□□□□ -2.48
LIMA1Q9UHB6 RNU6-687P-201ENST00000516443 89 ntBASIC-0.45□□□□□ -2.48
LIMA1Q9UHB6 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.45□□□□□ -2.48
LIMA1Q9UHB6 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.45□□□□□ -2.48
LIMA1Q9UHB6 SNORD115-31-201ENST00000365318 82 ntBASIC-0.46□□□□□ -2.48
LIMA1Q9UHB6 RNU6-587P-201ENST00000391282 106 ntBASIC-0.46□□□□□ -2.48
LIMA1Q9UHB6 RNA5SP225-201ENST00000410874 135 ntBASIC-0.46□□□□□ -2.48
LIMA1Q9UHB6 RNU6-284P-201ENST00000411105 106 ntBASIC-0.46□□□□□ -2.48
LIMA1Q9UHB6 SNORD22.1-201ENST00000516331 125 ntBASIC-0.47□□□□□ -2.48
LIMA1Q9UHB6 SNORD116-24-201ENST00000384549 92 ntBASIC-0.48□□□□□ -2.49
LIMA1Q9UHB6 MIR518B-201ENST00000385127 83 ntBASIC-0.48□□□□□ -2.49
LIMA1Q9UHB6 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.48□□□□□ -2.49
LIMA1Q9UHB6 U7.4-201ENST00000614961 63 ntBASIC-0.48□□□□□ -2.49
LIMA1Q9UHB6 AL627230.5-201ENST00000619807 58 ntBASIC-0.48□□□□□ -2.49
LIMA1Q9UHB6 MIR548C-201ENST00000384815 97 ntBASIC-0.49□□□□□ -2.49
LIMA1Q9UHB6 MIR204-201ENST00000385200 110 ntBASIC-0.49□□□□□ -2.49
LIMA1Q9UHB6 MIR154-201ENST00000385243 84 ntBASIC-0.49□□□□□ -2.49
LIMA1Q9UHB6 RNU6-721P-201ENST00000410155 105 ntBASIC-0.49□□□□□ -2.49
LIMA1Q9UHB6 MTND4LP1-201ENST00000446263 157 ntBASIC-0.49□□□□□ -2.49
LIMA1Q9UHB6 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.49□□□□□ -2.49
LIMA1Q9UHB6 MIR124-2-201ENST00000385081 109 ntBASIC-0.5□□□□□ -2.49
LIMA1Q9UHB6 MT-TQ-201ENST00000387372 72 ntBASIC-0.5□□□□□ -2.49
LIMA1Q9UHB6 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.5□□□□□ -2.49
LIMA1Q9UHB6 SNORA13-201ENST00000458790 133 ntBASIC-0.5□□□□□ -2.49
LIMA1Q9UHB6 RNU6-523P-201ENST00000516304 54 ntBASIC-0.5□□□□□ -2.49
LIMA1Q9UHB6 RNY1P9-201ENST00000532431 109 ntBASIC-0.5□□□□□ -2.49
LIMA1Q9UHB6 MIR3179-1-201ENST00000578940 84 ntBASIC-0.5□□□□□ -2.49
LIMA1Q9UHB6 MIR3179-2-201ENST00000579107 84 ntBASIC-0.5□□□□□ -2.49
LIMA1Q9UHB6 MIR3179-3-201ENST00000579566 84 ntBASIC-0.5□□□□□ -2.49
LIMA1Q9UHB6 MIR548AX-201ENST00000580117 73 ntBASIC-0.5□□□□□ -2.49
LIMA1Q9UHB6 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.5□□□□□ -2.49
LIMA1Q9UHB6 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.5□□□□□ -2.49
LIMA1Q9UHB6 MIR3179-4-201ENST00000617599 84 ntBASIC-0.5□□□□□ -2.49
LIMA1Q9UHB6 U4.4-201ENST00000620626 117 ntBASIC-0.5□□□□□ -2.49
LIMA1Q9UHB6 MIR409-201ENST00000362237 79 ntBASIC-0.51□□□□□ -2.49
LIMA1Q9UHB6 SNORD74.6-201ENST00000364796 70 ntBASIC-0.51□□□□□ -2.49
LIMA1Q9UHB6 RNU6-24P-201ENST00000384440 107 ntBASIC-0.51□□□□□ -2.49
LIMA1Q9UHB6 RNU6-411P-201ENST00000384451 107 ntBASIC-0.51□□□□□ -2.49
LIMA1Q9UHB6 RNA5SP266-201ENST00000410273 108 ntBASIC-0.51□□□□□ -2.49
LIMA1Q9UHB6 MIR4436A-201ENST00000585278 85 ntBASIC-0.51□□□□□ -2.49
LIMA1Q9UHB6 SNORD114-14-201ENST00000362723 75 ntBASIC-0.52□□□□□ -2.49
LIMA1Q9UHB6 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.52□□□□□ -2.49
LIMA1Q9UHB6 RNU6-668P-201ENST00000364180 107 ntBASIC-0.52□□□□□ -2.49
LIMA1Q9UHB6 SNORA3B-201ENST00000391305 131 ntBASIC-0.52□□□□□ -2.49
LIMA1Q9UHB6 MIR517B-201ENST00000385102 67 ntBASIC-0.53□□□□□ -2.49
LIMA1Q9UHB6 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.54□□□□□ -2.5
LIMA1Q9UHB6 RNU6-698P-201ENST00000363523 107 ntBASIC-0.54□□□□□ -2.5
LIMA1Q9UHB6 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.54□□□□□ -2.5
LIMA1Q9UHB6 RNU6-34P-201ENST00000364874 107 ntBASIC-0.54□□□□□ -2.5
LIMA1Q9UHB6 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.54□□□□□ -2.5
LIMA1Q9UHB6 RNU6-246P-201ENST00000384702 107 ntBASIC-0.54□□□□□ -2.5
LIMA1Q9UHB6 AP000533.3-201ENST00000447704 118 ntBASIC-0.54□□□□□ -2.5
LIMA1Q9UHB6 RNA5SP215-201ENST00000363440 122 ntBASIC-0.55□□□□□ -2.5
LIMA1Q9UHB6 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.55□□□□□ -2.5
LIMA1Q9UHB6 MIR548V-201ENST00000584165 80 ntBASIC-0.55□□□□□ -2.5
LIMA1Q9UHB6 RNU6-895P-201ENST00000384125 103 ntBASIC-0.56□□□□□ -2.5
LIMA1Q9UHB6 MIR889-201ENST00000401280 79 ntBASIC-0.56□□□□□ -2.5
LIMA1Q9UHB6 RNU6-634P-201ENST00000459134 106 ntBASIC-0.56□□□□□ -2.5
LIMA1Q9UHB6 AC021146.6-201ENST00000514659 117 ntBASIC-0.56□□□□□ -2.5
LIMA1Q9UHB6 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.57□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 229.9 ms