Protein–RNA interactions for Protein: Q9NQT5

EXOSC3, Exosome complex component RRP40, humanhuman

Known RBP Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3Q9NQT5 RNU6-633P-201ENST00000362612 103 ntBASIC-0.98□□□□□ -2.57
EXOSC3Q9NQT5 SNORD115-37-201ENST00000363768 82 ntBASIC-0.98□□□□□ -2.57
EXOSC3Q9NQT5 RNU6-164P-201ENST00000364604 103 ntBASIC-0.98□□□□□ -2.57
EXOSC3Q9NQT5 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.98□□□□□ -2.57
EXOSC3Q9NQT5 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.98□□□□□ -2.57
EXOSC3Q9NQT5 MIR4441-201ENST00000582623 100 ntBASIC-0.98□□□□□ -2.57
EXOSC3Q9NQT5 MIR601-201ENST00000385256 79 ntBASIC-0.99□□□□□ -2.57
EXOSC3Q9NQT5 AC108019.1-201ENST00000512540 175 ntBASIC-0.99□□□□□ -2.57
EXOSC3Q9NQT5 MIR4756-201ENST00000577874 78 ntBASIC-0.99□□□□□ -2.57
EXOSC3Q9NQT5 AP001318.4-201ENST00000616637 121 ntBASIC-0.99□□□□□ -2.57
EXOSC3Q9NQT5 RNU6-681P-201ENST00000364012 104 ntBASIC-1□□□□□ -2.57
EXOSC3Q9NQT5 SNX3P1X-201ENST00000414887 175 ntBASIC-1□□□□□ -2.57
EXOSC3Q9NQT5 SNORA40.13-201ENST00000516379 120 ntBASIC-1□□□□□ -2.57
EXOSC3Q9NQT5 MALAT1.1-201ENST00000618249 95 ntBASIC-1□□□□□ -2.57
EXOSC3Q9NQT5 MIR6739-201ENST00000622461 75 ntBASIC-1□□□□□ -2.57
EXOSC3Q9NQT5 RNU6-924P-201ENST00000362926 108 ntBASIC-1.01□□□□□ -2.57
EXOSC3Q9NQT5 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.01□□□□□ -2.57
EXOSC3Q9NQT5 AL035461.1-201ENST00000421490 332 ntBASIC-1.01□□□□□ -2.57
EXOSC3Q9NQT5 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.01□□□□□ -2.57
EXOSC3Q9NQT5 MIR507-201ENST00000385234 94 ntBASIC-1.02□□□□□ -2.57
EXOSC3Q9NQT5 SNORD19-201ENST00000391191 68 ntBASIC-1.02□□□□□ -2.57
EXOSC3Q9NQT5 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.03□□□□□ -2.57
EXOSC3Q9NQT5 SNORD116-22-201ENST00000384430 92 ntBASIC-1.03□□□□□ -2.57
EXOSC3Q9NQT5 RNU6-402P-201ENST00000410678 103 ntBASIC-1.03□□□□□ -2.57
EXOSC3Q9NQT5 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.03□□□□□ -2.57
EXOSC3Q9NQT5 AL606753.1-201ENST00000427435 87 ntBASIC-1.03□□□□□ -2.57
EXOSC3Q9NQT5 AC090616.4-201ENST00000448026 115 ntBASIC-1.03□□□□□ -2.57
EXOSC3Q9NQT5 AC093729.1-201ENST00000513074 128 ntBASIC-1.03□□□□□ -2.57
EXOSC3Q9NQT5 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.04□□□□□ -2.58
EXOSC3Q9NQT5 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.04□□□□□ -2.58
EXOSC3Q9NQT5 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.04□□□□□ -2.58
EXOSC3Q9NQT5 SNORD113-1-201ENST00000365321 69 ntBASIC-1.04□□□□□ -2.58
EXOSC3Q9NQT5 RPL35AP4-201ENST00000412007 102 ntBASIC-1.04□□□□□ -2.58
EXOSC3Q9NQT5 AL353691.2-201ENST00000443795 59 ntBASIC-1.04□□□□□ -2.58
EXOSC3Q9NQT5 RNU6-168P-201ENST00000516189 101 ntBASIC-1.04□□□□□ -2.58
EXOSC3Q9NQT5 RNU6-267P-201ENST00000516714 103 ntBASIC-1.04□□□□□ -2.58
EXOSC3Q9NQT5 U4.2-201ENST00000618561 85 ntBASIC-1.04□□□□□ -2.58
EXOSC3Q9NQT5 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.04□□□□□ -2.58
EXOSC3Q9NQT5 SNORA63.4-201ENST00000362763 126 ntBASIC-1.05□□□□□ -2.58
EXOSC3Q9NQT5 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.05□□□□□ -2.58
EXOSC3Q9NQT5 RNU6-219P-201ENST00000364728 107 ntBASIC-1.05□□□□□ -2.58
EXOSC3Q9NQT5 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.05□□□□□ -2.58
EXOSC3Q9NQT5 RNU6-732P-201ENST00000516033 103 ntBASIC-1.05□□□□□ -2.58
EXOSC3Q9NQT5 RNU6-518P-201ENST00000516056 96 ntBASIC-1.05□□□□□ -2.58
EXOSC3Q9NQT5 MIR548AG1-201ENST00000579932 66 ntBASIC-1.05□□□□□ -2.58
EXOSC3Q9NQT5 MIR664B-201ENST00000626756 61 ntBASIC-1.05□□□□□ -2.58
EXOSC3Q9NQT5 RNU6-755P-201ENST00000364400 103 ntBASIC-1.06□□□□□ -2.58
EXOSC3Q9NQT5 MIR519A2-201ENST00000384990 87 ntBASIC-1.06□□□□□ -2.58
EXOSC3Q9NQT5 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.06□□□□□ -2.58
EXOSC3Q9NQT5 MIR198-201ENST00000637333 62 ntBASIC-1.06□□□□□ -2.58
EXOSC3Q9NQT5 RNU6-624P-201ENST00000363411 107 ntBASIC-1.07□□□□□ -2.58
EXOSC3Q9NQT5 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.07□□□□□ -2.58
EXOSC3Q9NQT5 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.07□□□□□ -2.58
EXOSC3Q9NQT5 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.07□□□□□ -2.58
EXOSC3Q9NQT5 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.07□□□□□ -2.58
EXOSC3Q9NQT5 MIR5683-201ENST00000636514 76 ntBASIC-1.07□□□□□ -2.58
EXOSC3Q9NQT5 RNU6-79P-201ENST00000362511 107 ntBASIC-1.08□□□□□ -2.58
EXOSC3Q9NQT5 RNY4P27-201ENST00000363341 96 ntBASIC-1.08□□□□□ -2.58
EXOSC3Q9NQT5 MIR488-201ENST00000365739 83 ntBASIC-1.08□□□□□ -2.58
EXOSC3Q9NQT5 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.08□□□□□ -2.58
EXOSC3Q9NQT5 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.08□□□□□ -2.58
EXOSC3Q9NQT5 HAR1A.1-201ENST00000459583 118 ntBASIC-1.08□□□□□ -2.58
EXOSC3Q9NQT5 RNU7-154P-201ENST00000516194 62 ntBASIC-1.08□□□□□ -2.58
EXOSC3Q9NQT5 MIR548BB-201ENST00000626714 66 ntBASIC-1.08□□□□□ -2.58
EXOSC3Q9NQT5 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.09□□□□□ -2.58
EXOSC3Q9NQT5 RNU6-32P-201ENST00000383948 107 ntBASIC-1.09□□□□□ -2.58
EXOSC3Q9NQT5 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.09□□□□□ -2.58
EXOSC3Q9NQT5 RNU6-13P-201ENST00000384248 107 ntBASIC-1.09□□□□□ -2.58
EXOSC3Q9NQT5 RNU6-12P-201ENST00000384604 107 ntBASIC-1.09□□□□□ -2.58
EXOSC3Q9NQT5 RNU6-246P-201ENST00000384702 107 ntBASIC-1.09□□□□□ -2.58
EXOSC3Q9NQT5 RNU6-41P-201ENST00000384741 107 ntBASIC-1.09□□□□□ -2.58
EXOSC3Q9NQT5 MIR1468-201ENST00000410600 86 ntBASIC-1.09□□□□□ -2.58
EXOSC3Q9NQT5 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.09□□□□□ -2.58
EXOSC3Q9NQT5 RNU6-118P-201ENST00000516552 102 ntBASIC-1.09□□□□□ -2.58
EXOSC3Q9NQT5 RNU6-656P-201ENST00000516785 107 ntBASIC-1.09□□□□□ -2.58
EXOSC3Q9NQT5 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.09□□□□□ -2.58
EXOSC3Q9NQT5 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.09□□□□□ -2.58
EXOSC3Q9NQT5 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.1□□□□□ -2.59
EXOSC3Q9NQT5 AL603908.1-201ENST00000406098 201 ntBASIC-1.1□□□□□ -2.59
EXOSC3Q9NQT5 RNU7-88P-201ENST00000458752 63 ntBASIC-1.1□□□□□ -2.59
EXOSC3Q9NQT5 RNU6-980P-201ENST00000516925 103 ntBASIC-1.1□□□□□ -2.59
EXOSC3Q9NQT5 U7.5-201ENST00000517224 61 ntBASIC-1.1□□□□□ -2.59
EXOSC3Q9NQT5 RNU6-640P-201ENST00000363693 105 ntBASIC-1.11□□□□□ -2.59
EXOSC3Q9NQT5 RNU6-497P-201ENST00000365316 104 ntBASIC-1.11□□□□□ -2.59
EXOSC3Q9NQT5 RNU6-147P-201ENST00000383983 107 ntBASIC-1.11□□□□□ -2.59
EXOSC3Q9NQT5 SNORD20-201ENST00000384550 80 ntBASIC-1.11□□□□□ -2.59
EXOSC3Q9NQT5 RNU6-400P-201ENST00000391173 106 ntBASIC-1.11□□□□□ -2.59
EXOSC3Q9NQT5 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.11□□□□□ -2.59
EXOSC3Q9NQT5 AL021921.1-201ENST00000442774 93 ntBASIC-1.11□□□□□ -2.59
EXOSC3Q9NQT5 RNU6-330P-201ENST00000363015 107 ntBASIC-1.12□□□□□ -2.59
EXOSC3Q9NQT5 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.12□□□□□ -2.59
EXOSC3Q9NQT5 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.12□□□□□ -2.59
EXOSC3Q9NQT5 MIR496-201ENST00000385226 102 ntBASIC-1.12□□□□□ -2.59
EXOSC3Q9NQT5 RNA5SP476-201ENST00000516613 103 ntBASIC-1.12□□□□□ -2.59
EXOSC3Q9NQT5 MIR3139-201ENST00000579145 76 ntBASIC-1.12□□□□□ -2.59
EXOSC3Q9NQT5 MIR4490-201ENST00000582647 84 ntBASIC-1.12□□□□□ -2.59
EXOSC3Q9NQT5 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.12□□□□□ -2.59
EXOSC3Q9NQT5 RNA5SP405-201ENST00000363059 114 ntBASIC-1.13□□□□□ -2.59
EXOSC3Q9NQT5 RNU6-645P-201ENST00000364649 106 ntBASIC-1.13□□□□□ -2.59
EXOSC3Q9NQT5 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.13□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 177 ms