Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.79□□□□□ -2.28
PHOX2BQ99453 RNA5SP347-201ENST00000362445 119 ntBASIC0.78□□□□□ -2.28
PHOX2BQ99453 AC108740.1-201ENST00000498629 225 ntBASIC0.78□□□□□ -2.28
PHOX2BQ99453 AP000676.1-201ENST00000533307 52 ntBASIC0.78□□□□□ -2.28
PHOX2BQ99453 SNORD116.2-201ENST00000391251 93 ntBASIC0.77□□□□□ -2.29
PHOX2BQ99453 AL353803.5-201ENST00000599815 141 ntBASIC0.77□□□□□ -2.29
PHOX2BQ99453 SNORD114-2-201ENST00000363953 78 ntBASIC0.76□□□□□ -2.29
PHOX2BQ99453 MIR4802-201ENST00000581881 80 ntBASIC0.76□□□□□ -2.29
PHOX2BQ99453 AC090625.1-201ENST00000357130 210 ntBASIC0.75□□□□□ -2.29
PHOX2BQ99453 RNA5SP499-201ENST00000363982 119 ntBASIC0.75□□□□□ -2.29
PHOX2BQ99453 SNORD115-23-201ENST00000364461 82 ntBASIC0.75□□□□□ -2.29
PHOX2BQ99453 RNU6-458P-201ENST00000384179 107 ntBASIC0.75□□□□□ -2.29
PHOX2BQ99453 MIR892B-201ENST00000401279 77 ntBASIC0.75□□□□□ -2.29
PHOX2BQ99453 MIR4514-201ENST00000581410 57 ntBASIC0.75□□□□□ -2.29
PHOX2BQ99453 U6.58-201ENST00000613107 107 ntBASIC0.75□□□□□ -2.29
PHOX2BQ99453 MIRLET7D-201ENST00000362263 87 ntBASIC0.74□□□□□ -2.29
PHOX2BQ99453 SNORA68.3-201ENST00000515906 83 ntBASIC0.74□□□□□ -2.29
PHOX2BQ99453 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.73□□□□□ -2.29
PHOX2BQ99453 MIR4432-201ENST00000581823 84 ntBASIC0.73□□□□□ -2.29
PHOX2BQ99453 Y_RNA.109-201ENST00000363215 102 ntBASIC0.72□□□□□ -2.29
PHOX2BQ99453 SNORA62.4-201ENST00000365504 151 ntBASIC0.72□□□□□ -2.29
PHOX2BQ99453 snoU13.19-201ENST00000459148 104 ntBASIC0.72□□□□□ -2.29
PHOX2BQ99453 RNU6-351P-201ENST00000516097 100 ntBASIC0.72□□□□□ -2.29
PHOX2BQ99453 MIR5589-201ENST00000579442 60 ntBASIC0.72□□□□□ -2.29
PHOX2BQ99453 RNU6-127P-201ENST00000390897 107 ntBASIC0.71□□□□□ -2.3
PHOX2BQ99453 RNA5SP63-201ENST00000391225 112 ntBASIC0.71□□□□□ -2.3
PHOX2BQ99453 MIR103A1-201ENST00000362165 78 ntBASIC0.7□□□□□ -2.3
PHOX2BQ99453 SNORA40B-201ENST00000385573 128 ntBASIC0.7□□□□□ -2.3
PHOX2BQ99453 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.7□□□□□ -2.3
PHOX2BQ99453 SNORD1B-201ENST00000363091 84 ntBASIC0.69□□□□□ -2.3
PHOX2BQ99453 RNU6-172P-201ENST00000411000 93 ntBASIC0.69□□□□□ -2.3
PHOX2BQ99453 CR383656.4-201ENST00000546909 122 ntBASIC0.69□□□□□ -2.3
PHOX2BQ99453 Y_RNA.379-201ENST00000365653 102 ntBASIC0.68□□□□□ -2.3
PHOX2BQ99453 RNU6-1133P-201ENST00000410963 100 ntBASIC0.68□□□□□ -2.3
PHOX2BQ99453 MIR6866-201ENST00000638146 69 ntBASIC0.68□□□□□ -2.3
PHOX2BQ99453 MIR148A-201ENST00000362215 68 ntBASIC0.67□□□□□ -2.3
PHOX2BQ99453 MIR329-2-201ENST00000385029 84 ntBASIC0.67□□□□□ -2.3
PHOX2BQ99453 SNORA62.5-201ENST00000516634 120 ntBASIC0.67□□□□□ -2.3
PHOX2BQ99453 SNORA40.16-201ENST00000517238 121 ntBASIC0.67□□□□□ -2.3
PHOX2BQ99453 AC069113.3-201ENST00000521019 150 ntBASIC0.67□□□□□ -2.3
PHOX2BQ99453 AC108676.2-201ENST00000605225 163 ntBASIC0.67□□□□□ -2.3
PHOX2BQ99453 RNU6-900P-201ENST00000384498 102 ntBASIC0.66□□□□□ -2.3
PHOX2BQ99453 MIR548AG1-201ENST00000579932 66 ntBASIC0.66□□□□□ -2.3
PHOX2BQ99453 RNU6-1327P-201ENST00000365302 105 ntBASIC0.65□□□□□ -2.31
PHOX2BQ99453 RNU6-815P-201ENST00000384080 113 ntBASIC0.65□□□□□ -2.31
PHOX2BQ99453 RNU6-30P-201ENST00000384561 107 ntBASIC0.65□□□□□ -2.31
PHOX2BQ99453 MIR6514-201ENST00000622549 70 ntBASIC0.65□□□□□ -2.31
PHOX2BQ99453 MIR5087-201ENST00000635826 76 ntBASIC0.65□□□□□ -2.31
PHOX2BQ99453 RNU6-973P-201ENST00000364690 107 ntBASIC0.64□□□□□ -2.31
PHOX2BQ99453 RNU7-55P-201ENST00000459426 62 ntBASIC0.64□□□□□ -2.31
PHOX2BQ99453 MIR4743-201ENST00000584576 69 ntBASIC0.64□□□□□ -2.31
PHOX2BQ99453 AL391099.1-201ENST00000624635 187 ntBASIC0.64□□□□□ -2.31
PHOX2BQ99453 RNU7-160P-201ENST00000516660 62 ntBASIC0.63□□□□□ -2.31
PHOX2BQ99453 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC0.63□□□□□ -2.31
PHOX2BQ99453 RNA5SP25-201ENST00000410815 110 ntBASIC0.62□□□□□ -2.31
PHOX2BQ99453 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC0.62□□□□□ -2.31
PHOX2BQ99453 RNU6-810P-201ENST00000364001 107 ntBASIC0.61□□□□□ -2.31
PHOX2BQ99453 MIR4315-1-201ENST00000636800 73 ntBASIC0.61□□□□□ -2.31
PHOX2BQ99453 MIR4315-2-201ENST00000640925 73 ntBASIC0.61□□□□□ -2.31
PHOX2BQ99453 MIR610-201ENST00000385139 96 ntBASIC0.6□□□□□ -2.31
PHOX2BQ99453 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.59□□□□□ -2.31
PHOX2BQ99453 RNU6-180P-201ENST00000516697 61 ntBASIC0.59□□□□□ -2.31
PHOX2BQ99453 MIR548X-201ENST00000580069 75 ntBASIC0.59□□□□□ -2.31
PHOX2BQ99453 AC023932.2-201ENST00000603176 175 ntBASIC0.59□□□□□ -2.31
PHOX2BQ99453 MIR409-201ENST00000362237 79 ntBASIC0.58□□□□□ -2.32
PHOX2BQ99453 MIR643-201ENST00000385267 97 ntBASIC0.58□□□□□ -2.32
PHOX2BQ99453 RNU6-696P-201ENST00000390834 107 ntBASIC0.58□□□□□ -2.32
PHOX2BQ99453 RNU6-995P-201ENST00000391244 107 ntBASIC0.57□□□□□ -2.32
PHOX2BQ99453 MIR548AA1-201ENST00000384971 97 ntBASIC0.56□□□□□ -2.32
PHOX2BQ99453 RNU6-980P-201ENST00000516925 103 ntBASIC0.56□□□□□ -2.32
PHOX2BQ99453 RNU4-33P-201ENST00000364316 85 ntBASIC0.55□□□□□ -2.32
PHOX2BQ99453 MIR92A1-201ENST00000385233 78 ntBASIC0.55□□□□□ -2.32
PHOX2BQ99453 RNA5SP163-201ENST00000410304 99 ntBASIC0.55□□□□□ -2.32
PHOX2BQ99453 AC096531.1-201ENST00000419107 107 ntBASIC0.55□□□□□ -2.32
PHOX2BQ99453 RNU6-753P-201ENST00000363926 107 ntBASIC0.54□□□□□ -2.32
PHOX2BQ99453 RNU6-598P-201ENST00000364017 105 ntBASIC0.54□□□□□ -2.32
PHOX2BQ99453 RNU6-455P-201ENST00000384681 107 ntBASIC0.54□□□□□ -2.32
PHOX2BQ99453 RNU6-924P-201ENST00000362926 108 ntBASIC0.53□□□□□ -2.32
PHOX2BQ99453 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
PHOX2BQ99453 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.53□□□□□ -2.33
PHOX2BQ99453 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.53□□□□□ -2.33
PHOX2BQ99453 MIR6718-201ENST00000616153 80 ntBASIC0.52□□□□□ -2.33
PHOX2BQ99453 AL445584.3-201ENST00000617173 78 ntBASIC0.51□□□□□ -2.33
PHOX2BQ99453 Z95118.1-201ENST00000421372 247 ntBASIC0.5□□□□□ -2.33
PHOX2BQ99453 AC114737.2-201ENST00000421583 173 ntBASIC0.5□□□□□ -2.33
PHOX2BQ99453 RNU6-1262P-201ENST00000516217 96 ntBASIC0.5□□□□□ -2.33
PHOX2BQ99453 Y_RNA.698-201ENST00000516798 118 ntBASIC0.5□□□□□ -2.33
PHOX2BQ99453 IGLVI-20-201ENST00000519296 130 ntBASIC0.5□□□□□ -2.33
PHOX2BQ99453 uc_338.36-201ENST00000622331 158 ntBASIC0.49□□□□□ -2.33
PHOX2BQ99453 Y_RNA.613-201ENST00000410726 97 ntBASIC0.48□□□□□ -2.33
PHOX2BQ99453 RNU7-151P-201ENST00000516930 53 ntBASIC0.48□□□□□ -2.33
PHOX2BQ99453 RNU6-419P-201ENST00000517030 63 ntBASIC0.48□□□□□ -2.33
PHOX2BQ99453 MIR4490-201ENST00000582647 84 ntBASIC0.48□□□□□ -2.33
PHOX2BQ99453 MIR6507-201ENST00000613630 70 ntBASIC0.48□□□□□ -2.33
PHOX2BQ99453 MIR6888-201ENST00000621977 67 ntBASIC0.48□□□□□ -2.33
PHOX2BQ99453 SNORD114-15-201ENST00000364687 72 ntBASIC0.47□□□□□ -2.33
PHOX2BQ99453 RNU4-88P-201ENST00000411220 86 ntBASIC0.47□□□□□ -2.33
PHOX2BQ99453 RNU6-758P-201ENST00000516292 89 ntBASIC0.47□□□□□ -2.33
PHOX2BQ99453 RNU6-1206P-201ENST00000516339 103 ntBASIC0.47□□□□□ -2.33
PHOX2BQ99453 MIR4464-201ENST00000580818 92 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 250 ms